MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 67308 bp
Accession: NZ_CP021149 Location: 1..67308 Organism: Vibrio campbellii strain LA16-V1 Replicon: plasmid pLA16-3
Accession: NZ_CP021149 Location: 1..67308 Organism: Vibrio campbellii strain LA16-V1 Replicon: plasmid pLA16-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CAY59_RS28990 () | 214..357 | - | 144 | WP_153189461.1 | hypothetical protein | - |
| CAY59_RS28040 () | 354..1445 | - | 1092 | Protein_2 | IS3 family transposase | - |
| CAY59_RS28045 () | 1887..2984 | + | 1098 | WP_025792418.1 | Outer membrane protein A | VF |
| CAY59_RS28050 () | 3002..7891 | + | 4890 | WP_172841006.1 | Ig-like domain-containing protein | - |
| CAY59_RS29200 () | 8529..9011 | - | 483 | Protein_5 | DDE-type integrase/transposase/recombinase | - |
| CAY59_RS28065 () | 9319..9819 | + | 501 | WP_157664729.1 | transglutaminase-like cysteine peptidase | - |
| CAY59_RS28075 () | 11205..11375 | + | 171 | WP_157664730.1 | transposase | - |
| CAY59_RS28080 () | 11729..13648 | + | 1920 | WP_086370861.1 | metallophosphoesterase | - |
| CAY59_RS28085 () | 13858..14148 | + | 291 | Protein_9 | transposase | - |
| CAY59_RS28090 () | 14142..15212 | - | 1071 | WP_086370862.1 | ParB/RepB/Spo0J family partition protein | - |
| CAY59_RS28095 () | 15212..16411 | - | 1200 | WP_071653156.1 | AAA family ATPase | - |
| CAY59_RS28100 () | 17125..17214 | + | 90 | Protein_12 | recombinase family protein | - |
| CAY59_RS28105 () | 17346..18090 | + | 745 | Protein_13 | Recombination-promoting nuclease RpnA | VF |
| CAY59_RS28110 () | 18777..19202 | - | 426 | WP_025789544.1 | hypothetical protein | - |
| CAY59_RS29205 () | 19186..19527 | - | 342 | WP_080277469.1 | hypothetical protein | - |
| CAY59_RS28120 () | 20584..21231 | - | 648 | WP_023623169.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CAY59_RS28125 () | 21441..24434 | + | 2994 | WP_157664734.1 | Tn3 family transposase ISKox2 | Transposase |
| CAY59_RS28130 () | 24715..24963 | - | 249 | WP_023623173.1 | CRISPR-associated endonuclease Cas2 | - |
| CAY59_RS28135 () | 25701..26724 | + | 1024 | Protein_19 | IS630 family transposase ISVa15 | Transposase |
| CAY59_RS28140 () | 26716..27012 | - | 297 | WP_086369672.1 | DUF2971 domain-containing protein | - |
| CAY59_RS28145 () | 27175..28206 | - | 1032 | WP_172840956.1 | IS630 family transposase ISVa15 | Transposase |
| CAY59_RS28150 () | 28256..28636 | - | 381 | WP_086370863.1 | hypothetical protein | - |
| CAY59_RS28155 () | 29053..30084 | + | 1032 | WP_172841008.1 | IS630 family transposase ISVa15 | Transposase |
| CAY59_RS28160 () | 30638..31219 | + | 582 | WP_086370865.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| CAY59_RS28995 () | 31816..31989 | + | 174 | WP_017449264.1 | hypothetical protein | - |
| CAY59_RS28165 () | 32147..32566 | + | 420 | WP_131162819.1 | hypothetical protein | - |
| CAY59_RS28170 () | 33057..33641 | - | 585 | Protein_27 | replication initiation protein | - |
| CAY59_RS28175 () | 34021..34290 | + | 270 | Protein_28 | IS6 family transposase ISSba18 | Transposase |
| CAY59_RS28180 () | 34291..34776 | + | 486 | WP_086370867.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| CAY59_RS28185 () | 34877..35122 | + | 246 | WP_017449246.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| CAY59_RS28190 () | 35122..35439 | + | 318 | WP_086370868.1 | CcdB family protein | - |
| CAY59_RS28195 () | 35468..35734 | + | 267 | WP_131162812.1 | hypothetical protein | - |
| CAY59_RS28200 () | 36056..37195 | - | 1140 | WP_025789523.1 | Murein DD-endopeptidase MepM | VF |
| CAY59_RS29000 () | 37534..37710 | - | 177 | WP_157664731.1 | hypothetical protein | - |
| CAY59_RS28205 () | 38360..39391 | - | 1032 | WP_172840956.1 | IS630 family transposase ISVa15 | Transposase |
| CAY59_RS28210 () | 39575..39823 | - | 249 | WP_025789522.1 | hypothetical protein | - |
| CAY59_RS28215 () | 39905..40837 | - | 933 | WP_023624644.1 | OmpA family protein | - |
| CAY59_RS28220 () | 41624..42058 | + | 435 | WP_023624645.1 | IS630 family transposase ISSod10 | Transposase |
| CAY59_RS28225 () | 42351..42866 | - | 516 | WP_086370869.1 | DUF1566 domain-containing protein | - |
| CAY59_RS28230 () | 42769..43113 | - | 345 | WP_086370870.1 | Ig-like domain-containing protein | - |
| CAY59_RS28235 () | 43200..44231 | + | 1032 | WP_172840958.1 | IS630 family transposase ISVa15 | Transposase |
| CAY59_RS28240 () | 44316..44726 | - | 411 | WP_086370871.1 | Ig-like domain-containing protein | - |
| CAY59_RS28245 () | 44747..45310 | - | 564 | WP_172841007.1 | Ig-like domain-containing protein | - |
| CAY59_RS28250 () | 45836..46234 | - | 399 | WP_157664732.1 | hypothetical protein | - |
| CAY59_RS28255 () | 46544..46765 | + | 222 | WP_023624649.1 | hypothetical protein | - |
| CAY59_RS28265 () | 47368..47751 | + | 384 | Protein_46 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| CAY59_RS28270 () | 47746..48471 | - | 726 | WP_017449237.1 | site-specific integrase | - |
| CAY59_RS28275 () | 48922..49152 | + | 231 | WP_017449238.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CAY59_RS28280 () | 49149..49490 | + | 342 | WP_086370874.1 | endoribonuclease MazF | Toxin Detail |
| CAY59_RS28285 () | 49793..50368 | - | 576 | WP_086370875.1 | hypothetical protein | - |
| CAY59_RS28290 () | 50574..51542 | + | 969 | WP_086369237.1 | IS30 family transposase ISVa6 | Transposase |
| CAY59_RS28295 () | 51474..52193 | - | 720 | WP_086370876.1 | AHH domain-containing protein | - |
| CAY59_RS28300 () | 53436..54524 | - | 1089 | WP_086370877.1 | replication initiation protein | - |
| CAY59_RS28305 () | 54858..55496 | - | 639 | Protein_54 | IS5 family transposase ISVpa3 | Transposase |
| CAY59_RS28310 () | 55864..56505 | + | 642 | WP_086370878.1 | hypothetical protein | - |
| CAY59_RS28315 () | 56583..57140 | + | 558 | WP_025789492.1 | hypothetical protein | - |
| CAY59_RS28320 () | 57137..59872 | + | 2736 | WP_025789493.1 | TcfC E-set like domain-containing protein | - |
| CAY59_RS28325 () | 59878..60627 | + | 750 | WP_086370879.1 | hypothetical protein | - |
| CAY59_RS28330 () | 60624..61682 | + | 1059 | WP_157664733.1 | hypothetical protein | - |
| CAY59_RS28335 () | 61682..62602 | + | 921 | WP_086370881.1 | OmpA family protein | - |
| CAY59_RS28340 () | 62606..65377 | + | 2772 | WP_086370882.1 | hypothetical protein | - |
| CAY59_RS28345 () | 65636..66268 | + | 633 | WP_129194440.1 | hypothetical protein | - |
| CAY59_RS28350 () | 66334..66699 | + | 366 | WP_025789498.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|