MGE detailed information
MGE type: Genomic_island MGE length: 12261 bp
Accession: NZ_CP021144 Location: 4234442..4246702 Organism: Shigella sonnei strain 2015AM-1099 Replicon: chromosome
Accession: NZ_CP021144 Location: 4234442..4246702 Organism: Shigella sonnei strain 2015AM-1099 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B9127_RS23300 (4229511) | 4229511..4233719 | + | 4209 | WP_000508696.1 | RHS element core protein | - |
| B9127_RS23305 (4233731) | 4233731..4234180 | + | 450 | WP_005141515.1 | RHS element protein dsORF-h1 | - |
| B9127_RS23310 (4234442) | 4234442..4235578 | + | 1137 | Protein_4175 | ISAs1 family transposase ISEc1 | Transposase |
| B9127_RS23315 (4235616) | 4235616..4236026 | + | 411 | WP_162772774.1 | hypothetical protein | - |
| B9127_RS23320 (4236026) | 4236026..4236403 | + | 378 | WP_001077737.1 | hypothetical protein | - |
| B9127_RS23325 (4236872) | 4236872..4238008 | + | 1137 | WP_000420787.1 | ISAs1 family transposase ISEc1 | Transposase |
| B9127_RS23330 (4238050) | 4238050..4238820 | - | 771 | WP_001118061.1 | 2-oxoglutaramate amidase | - |
| B9127_RS23335 (4239001) | 4239001..4239447 | + | 447 | WP_005141527.1 | Ivy family C-type lysozyme inhibitor | - |
| B9127_RS23340 (4239490) | 4239490..4241934 | - | 2445 | WP_000973074.1 | Acyl-coenzyme A dehydrogenase | VF |
| B9127_RS23345 (4242174) | 4242174..4242752 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| B9127_RS23350 (4242958) | 4242958..4243725 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| B9127_RS23355 (4243696) | 4243696..4244436 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| B9127_RS23360 (4244592) | 4244592..4244870 | - | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| B9127_RS23365 (4244873) | 4244873..4245133 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| B9127_RS27585 (4246006) | 4246006..4246134 | + | 129 | Protein_4188 | ISAs1 family transposase | - |
| B9127_RS23380 (4246205) | 4246205..4246702 | + | 498 | WP_000006258.1 | REP-associated tyrosine transposase RayT | - |
| B9127_RS23385 (4246825) | 4246825..4248537 | - | 1713 | Protein_4190 | flagellar biosynthesis protein FlhA | - |
| B9127_RS23390 (4248509) | 4248509..4249294 | + | 786 | WP_000207568.1 | putative lateral flagellar export/assembly protein LafU | - |
| B9127_RS23395 (4249365) | 4249365..4250420 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| B9127_RS23400 (4250417) | 4250417..4250869 | + | 453 | WP_001059889.1 | GNAT family N-acetyltransferase | - |
| B9127_RS23410 (4251115) | 4251115..4251636 | + | 522 | Protein_4194 | RNA ligase RtcB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|