MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 62464 bp
Accession: NZ_CP021019 Location: 1..62464 Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 Replicon: plasmid pA
Accession: NZ_CP021019 Location: 1..62464 Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 Replicon: plasmid pA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XcfCFBP6167P_RS24720 () | 31..363 | + | 333 | WP_145982142.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23175 () | 600..2074 | + | 1475 | Protein_2 | P-type conjugative transfer protein TrbL | - |
| XcfCFBP6167P_RS23180 () | 2081..2791 | + | 711 | WP_039574290.1 | type IV secretory pathway, TrbF protein | - |
| XcfCFBP6167P_RS23185 () | 2818..3810 | + | 993 | WP_017164024.1 | P-type conjugative transfer protein TrbG | - |
| XcfCFBP6167P_RS23190 () | 3826..5178 | + | 1353 | WP_046735872.1 | TrbI/VirB10 family protein | - |
| XcfCFBP6167P_RS23195 () | 5351..5557 | + | 207 | WP_017164026.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23200 () | 5568..5807 | + | 240 | WP_005997461.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23205 () | 5880..6128 | + | 249 | WP_033481882.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23210 () | 6130..6960 | + | 831 | Protein_9 | DNA topoisomerase III | - |
| XcfCFBP6167P_RS23220 () | 7359..8678 | + | 1320 | WP_022557736.1 | DUF4990 domain-containing protein | - |
| XcfCFBP6167P_RS23225 () | 8805..10097 | + | 1293 | WP_033481893.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23230 () | 10249..10779 | + | 531 | Protein_12 | DNA topoisomerase III | - |
| XcfCFBP6167P_RS23235 () | 10849..10986 | + | 138 | Protein_13 | IS3 family transposase ISXcd1 | Transposase |
| XcfCFBP6167P_RS23240 () | 11061..11615 | - | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| XcfCFBP6167P_RS23245 () | 11629..12045 | - | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| XcfCFBP6167P_RS23250 () | 12042..12296 | - | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| XcfCFBP6167P_RS23255 () | 12508..12753 | + | 246 | Protein_17 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| XcfCFBP6167P_RS23260 () | 12790..14016 | - | 1227 | WP_011345585.1 | IS256 family transposase ISXax1 | Transposase |
| XcfCFBP6167P_RS23265 () | 14150..15202 | - | 1053 | WP_022557730.1 | type III secretion system YopJ family effector AvrBsT | - |
| XcfCFBP6167P_RS25370 () | 15337..15441 | - | 105 | Protein_20 | type III secretion system effector protein | - |
| XcfCFBP6167P_RS23275 () | 16123..17037 | + | 915 | WP_022557729.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23280 () | 17030..17887 | + | 858 | WP_033481873.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| XcfCFBP6167P_RS23285 () | 18066..18527 | + | 462 | WP_039731445.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23290 () | 18568..18804 | + | 237 | Protein_24 | hypothetical protein | - |
| XcfCFBP6167P_RS23295 () | 18808..19134 | + | 327 | WP_033481858.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23300 () | 19157..19756 | + | 600 | WP_022557725.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23305 () | 19793..20401 | - | 609 | WP_022557724.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23320 () | 21723..22046 | + | 324 | WP_022557721.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23325 () | 22606..22881 | + | 276 | WP_022557719.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23330 () | 23460..23858 | + | 399 | WP_039731964.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23335 () | 23985..24311 | + | 327 | Protein_31 | hypothetical protein | - |
| XcfCFBP6167P_RS23340 () | 24423..28439 | - | 4017 | WP_099800836.1 | TAL effector repeat-containing protein | - |
| XcfCFBP6167P_RS23350 () | 28696..28968 | + | 273 | Protein_33 | hypothetical protein | - |
| XcfCFBP6167P_RS23355 () | 29020..29247 | + | 228 | WP_022557753.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23360 () | 29475..29819 | + | 345 | WP_022557752.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23365 () | 29931..30515 | + | 585 | WP_022557751.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23370 () | 30869..31690 | + | 822 | WP_022557750.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23375 () | 32299..32481 | - | 183 | WP_080720969.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23380 () | 32708..33343 | + | 636 | WP_039572177.1 | AAA family ATPase | - |
| XcfCFBP6167P_RS23385 () | 33340..33675 | + | 336 | WP_039572180.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23390 () | 33919..34383 | + | 465 | WP_022557748.1 | DUF2840 domain-containing protein | - |
| XcfCFBP6167P_RS23395 () | 34388..34984 | + | 597 | WP_080948837.1 | S26 family signal peptidase | - |
| XcfCFBP6167P_RS23400 () | 34977..35567 | + | 591 | WP_052756669.1 | Type IV secretion system protein virB1 | VF |
| XcfCFBP6167P_RS23405 () | 36178..38808 | + | 2631 | WP_039572187.1 | hypothetical protein | Relaxase |
| XcfCFBP6167P_RS25375 () | 39592..40864 | + | 1273 | Protein_45 | Conjugal transfer protein TraG | VF |
| XcfCFBP6167P_RS23415 () | 40861..41352 | + | 492 | WP_017171863.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23420 () | 41385..41924 | + | 540 | WP_022557742.1 | plasmid pRiA4b ORF-3 family protein | - |
| XcfCFBP6167P_RS23425 () | 42090..42374 | - | 285 | WP_039572192.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23430 () | 42704..43150 | + | 447 | WP_039572194.1 | avidin/streptavidin family protein | - |
| XcfCFBP6167P_RS23435 () | 43293..43682 | + | 390 | WP_039587855.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23440 () | 44258..45076 | + | 819 | WP_039587854.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23445 () | 45779..45988 | + | 210 | WP_017164018.1 | helix-turn-helix domain-containing protein | - |
| XcfCFBP6167P_RS23450 () | 46073..47077 | + | 1005 | WP_017164019.1 | Putative conjugal transfer protein | VF |
| XcfCFBP6167P_RS23455 () | 47152..47472 | + | 321 | WP_017162817.1 | TrbC/VirB2 family protein | - |
| XcfCFBP6167P_RS23460 () | 47508..47741 | + | 234 | WP_074052351.1 | VirB3 family type IV secretion system protein | - |
| XcfCFBP6167P_RS23465 () | 47808..50378 | + | 2571 | WP_039570074.1 | DUF853 family protein | - |
| XcfCFBP6167P_RS23470 () | 50397..51170 | + | 774 | WP_039570072.1 | conjugal transfer protein | - |
| XcfCFBP6167P_RS24725 () | 51167..51520 | + | 354 | WP_127446653.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23475 () | 51738..53216 | + | 1479 | WP_046735871.1 | P-type conjugative transfer protein TrbL | - |
| XcfCFBP6167P_RS23480 () | 53223..53933 | + | 711 | WP_039574290.1 | type IV secretory pathway, TrbF protein | - |
| XcfCFBP6167P_RS23485 () | 53960..54952 | + | 993 | WP_017164024.1 | P-type conjugative transfer protein TrbG | - |
| XcfCFBP6167P_RS23490 () | 54968..56320 | + | 1353 | WP_046735872.1 | TrbI/VirB10 family protein | - |
| XcfCFBP6167P_RS23495 () | 56493..56699 | + | 207 | WP_017164026.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23500 () | 56710..56949 | + | 240 | WP_005997461.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23505 () | 57022..57270 | + | 249 | WP_033481882.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23510 () | 57272..58102 | + | 831 | Protein_66 | DNA topoisomerase III | - |
| XcfCFBP6167P_RS23520 () | 58501..59820 | + | 1320 | WP_022557736.1 | DUF4990 domain-containing protein | - |
| XcfCFBP6167P_RS23525 () | 59947..61239 | + | 1293 | WP_033481893.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23535 () | 61508..61936 | + | 429 | WP_099868340.1 | hypothetical protein | - |
| XcfCFBP6167P_RS23540 () | 61985..62122 | + | 138 | Protein_70 | IS3 family transposase ISXcd1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|