MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 53202 bp
Accession: NZ_CP021002 Location: 1..53202 Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166 Replicon: plasmid pA
Accession: NZ_CP021002 Location: 1..53202 Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166 Replicon: plasmid pA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XcfCFBP6166P_RS22495 () | 2..289 | + | 288 | Protein_0 | hypothetical protein | - |
| XcfCFBP6166P_RS22500 () | 643..1463 | + | 821 | Protein_1 | hypothetical protein | - |
| XcfCFBP6166P_RS22505 () | 2075..2283 | - | 209 | Protein_2 | hypothetical protein | - |
| XcfCFBP6166P_RS22510 () | 2486..3124 | + | 639 | WP_017162872.1 | AAA family ATPase | - |
| XcfCFBP6166P_RS22515 () | 3121..3456 | + | 336 | WP_022557749.1 | hypothetical protein | - |
| XcfCFBP6166P_RS22520 () | 3796..4260 | + | 465 | WP_022557748.1 | DUF2840 domain-containing protein | - |
| XcfCFBP6166P_RS22525 () | 4265..4861 | + | 597 | WP_080720968.1 | S26 family signal peptidase | - |
| XcfCFBP6166P_RS22530 () | 4854..5444 | + | 591 | WP_048481488.1 | Type IV secretion system protein virB1 | VF |
| XcfCFBP6166P_RS22535 () | 6067..8697 | + | 2631 | WP_033481785.1 | hypothetical protein | Relaxase |
| XcfCFBP6166P_RS24155 () | 9481..10753 | + | 1273 | Protein_9 | Conjugal transfer protein TraG | VF |
| XcfCFBP6166P_RS22545 () | 10750..11259 | + | 510 | WP_022557743.1 | hypothetical protein | - |
| XcfCFBP6166P_RS22550 () | 11273..11812 | + | 540 | WP_022557742.1 | plasmid pRiA4b ORF-3 family protein | - |
| XcfCFBP6166P_RS22555 () | 11978..12262 | - | 285 | WP_017154819.1 | hypothetical protein | - |
| XcfCFBP6166P_RS22560 () | 12592..13038 | + | 447 | WP_022557741.1 | avidin/streptavidin family protein | - |
| XcfCFBP6166P_RS22565 () | 13505..13894 | + | 390 | WP_022557740.1 | hypothetical protein | - |
| XcfCFBP6166P_RS22575 () | 14280..15369 | + | 1090 | Protein_15 | IS3 family transposase ISXac2 | Transposase |
| XcfCFBP6166P_RS22585 () | 15408..15713 | + | 306 | Protein_16 | type IV secretion system protein | - |
| XcfCFBP6166P_RS22590 () | 15740..16201 | + | 462 | Protein_17 | P-type conjugative transfer protein TrbG | - |
| XcfCFBP6166P_RS22595 () | 16266..17246 | + | 981 | WP_007975311.1 | IS5 family transposase ISXfu2 | Transposase |
| XcfCFBP6166P_RS22600 () | 17357..17893 | + | 537 | Protein_19 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| XcfCFBP6166P_RS22605 () | 17909..19261 | + | 1353 | WP_022557738.1 | TrbI/VirB10 family protein | - |
| XcfCFBP6166P_RS22610 () | 19434..19640 | + | 207 | WP_017164026.1 | hypothetical protein | - |
| XcfCFBP6166P_RS22615 () | 19651..19890 | + | 240 | WP_005997461.1 | hypothetical protein | - |
| XcfCFBP6166P_RS22620 () | 19963..20211 | + | 249 | WP_033481882.1 | hypothetical protein | - |
| XcfCFBP6166P_RS22625 () | 20213..21043 | + | 831 | Protein_24 | DNA topoisomerase III | - |
| XcfCFBP6166P_RS22635 () | 21442..22761 | + | 1320 | WP_022557736.1 | DUF4990 domain-containing protein | - |
| XcfCFBP6166P_RS22640 () | 22888..24180 | + | 1293 | WP_033481893.1 | hypothetical protein | - |
| XcfCFBP6166P_RS22645 () | 24332..24862 | + | 531 | Protein_27 | DNA topoisomerase III | - |
| XcfCFBP6166P_RS22650 () | 24932..25069 | + | 138 | Protein_28 | IS3 family transposase ISXcd1 | Transposase |
| XcfCFBP6166P_RS22655 () | 25144..25698 | - | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| XcfCFBP6166P_RS22660 () | 25712..26128 | - | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| XcfCFBP6166P_RS22665 () | 26125..26379 | - | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| XcfCFBP6166P_RS22670 () | 26591..26836 | + | 246 | Protein_32 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| XcfCFBP6166P_RS22675 () | 26873..28099 | - | 1227 | WP_011345585.1 | IS256 family transposase ISXax1 | Transposase |
| XcfCFBP6166P_RS22680 () | 28233..29285 | - | 1053 | WP_022557730.1 | type III secretion system YopJ family effector AvrBsT | - |
| XcfCFBP6166P_RS24160 () | 29420..29524 | - | 105 | Protein_35 | type III secretion system effector protein | - |
| XcfCFBP6166P_RS22690 () | 30207..31121 | + | 915 | WP_022557729.1 | hypothetical protein | - |
| XcfCFBP6166P_RS22695 () | 31114..31971 | + | 858 | WP_033481873.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| XcfCFBP6166P_RS22700 () | 32150..32611 | + | 462 | WP_039731445.1 | hypothetical protein | - |
| XcfCFBP6166P_RS22705 () | 32652..32888 | + | 237 | Protein_39 | hypothetical protein | - |
| XcfCFBP6166P_RS22710 () | 32892..33218 | + | 327 | WP_033481858.1 | hypothetical protein | - |
| XcfCFBP6166P_RS22715 () | 33241..33840 | + | 600 | WP_022557725.1 | hypothetical protein | - |
| XcfCFBP6166P_RS22720 () | 33877..34485 | - | 609 | WP_022557724.1 | hypothetical protein | - |
| XcfCFBP6166P_RS22735 () | 35807..36130 | + | 324 | WP_022557721.1 | hypothetical protein | - |
| XcfCFBP6166P_RS22740 () | 36690..36965 | + | 276 | WP_022557719.1 | hypothetical protein | - |
| XcfCFBP6166P_RS22745 () | 37544..37942 | + | 399 | WP_039731964.1 | hypothetical protein | - |
| XcfCFBP6166P_RS22750 () | 38069..38395 | + | 327 | Protein_46 | hypothetical protein | - |
| XcfCFBP6166P_RS22755 () | 38507..42523 | - | 4017 | WP_099800836.1 | TAL effector repeat-containing protein | - |
| XcfCFBP6166P_RS22765 () | 42780..43052 | + | 273 | Protein_48 | hypothetical protein | - |
| XcfCFBP6166P_RS22770 () | 43104..43331 | + | 228 | WP_022557753.1 | hypothetical protein | - |
| XcfCFBP6166P_RS22775 () | 43559..43903 | + | 345 | WP_022557752.1 | hypothetical protein | - |
| XcfCFBP6166P_RS22780 () | 44015..44599 | + | 585 | WP_022557751.1 | hypothetical protein | - |
| XcfCFBP6166P_RS22785 () | 44953..45774 | + | 822 | WP_022557750.1 | hypothetical protein | - |
| XcfCFBP6166P_RS22790 () | 46383..46565 | - | 183 | WP_080720969.1 | hypothetical protein | - |
| XcfCFBP6166P_RS22795 () | 46792..47430 | + | 639 | WP_017162872.1 | AAA family ATPase | - |
| XcfCFBP6166P_RS22800 () | 47427..47762 | + | 336 | WP_022557749.1 | hypothetical protein | - |
| XcfCFBP6166P_RS23970 () | 48102..49166 | + | 1065 | WP_158525805.1 | S26 family signal peptidase | - |
| XcfCFBP6166P_RS22810 () | 49159..49747 | + | 589 | Protein_57 | Type IV secretion system protein virB1 | VF |
| XcfCFBP6166P_RS22815 () | 50050..50287 | + | 238 | Protein_58 | hypothetical protein | - |
| XcfCFBP6166P_RS22820 () | 50372..52993 | + | 2622 | Protein_59 | hypothetical protein | Relaxase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|