MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 66554 bp
Accession: NZ_CP020988 Location: 1..66554 Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6994R Replicon: plasmid pA
Accession: NZ_CP020988 Location: 1..66554 Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6994R Replicon: plasmid pA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XcfCFBP6994P_RS22600 () | 398..3028 | + | 2631 | WP_039572187.1 | hypothetical protein | Relaxase |
| XcfCFBP6994P_RS23610 () | 3812..5084 | + | 1273 | Protein_1 | Conjugal transfer protein TraG | VF |
| XcfCFBP6994P_RS22610 () | 5081..5572 | + | 492 | WP_017171863.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22615 () | 5605..6144 | + | 540 | WP_022557742.1 | plasmid pRiA4b ORF-3 family protein | - |
| XcfCFBP6994P_RS22620 () | 6310..6621 | - | 312 | WP_099802907.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22625 () | 6653..7879 | + | 1227 | WP_011345585.1 | IS256 family transposase ISXax1 | Transposase |
| XcfCFBP6994P_RS22630 () | 8261..8707 | + | 447 | WP_039572194.1 | avidin/streptavidin family protein | - |
| XcfCFBP6994P_RS22635 () | 8850..9239 | + | 390 | WP_039587855.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22640 () | 9815..10633 | + | 819 | WP_039587854.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22645 () | 11336..11545 | + | 210 | WP_017164018.1 | helix-turn-helix domain-containing protein | - |
| XcfCFBP6994P_RS22650 () | 11630..12634 | + | 1005 | WP_017164019.1 | Putative conjugal transfer protein | VF |
| XcfCFBP6994P_RS22655 () | 12709..13029 | + | 321 | WP_017162817.1 | TrbC/VirB2 family protein | - |
| XcfCFBP6994P_RS22660 () | 13065..13298 | + | 234 | WP_074052351.1 | VirB3 family type IV secretion system protein | - |
| XcfCFBP6994P_RS22665 () | 13365..15935 | + | 2571 | WP_039570074.1 | DUF853 family protein | - |
| XcfCFBP6994P_RS22670 () | 15954..16727 | + | 774 | WP_039570072.1 | conjugal transfer protein | - |
| XcfCFBP6994P_RS23310 () | 16724..17077 | + | 354 | WP_127446653.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22675 () | 17295..18773 | + | 1479 | WP_046735871.1 | P-type conjugative transfer protein TrbL | - |
| XcfCFBP6994P_RS22680 () | 18780..19490 | + | 711 | WP_039574290.1 | type IV secretory pathway, TrbF protein | - |
| XcfCFBP6994P_RS22685 () | 19517..20509 | + | 993 | WP_017164024.1 | P-type conjugative transfer protein TrbG | - |
| XcfCFBP6994P_RS22690 () | 20525..21877 | + | 1353 | WP_046735872.1 | TrbI/VirB10 family protein | - |
| XcfCFBP6994P_RS22695 () | 22050..22256 | + | 207 | WP_017164026.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22700 () | 22267..22506 | + | 240 | WP_005997461.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22705 () | 22579..22827 | + | 249 | WP_033481882.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22710 () | 22829..23659 | + | 831 | Protein_23 | DNA topoisomerase III | - |
| XcfCFBP6994P_RS22720 () | 24058..25377 | + | 1320 | WP_022557736.1 | DUF4990 domain-containing protein | - |
| XcfCFBP6994P_RS22725 () | 25504..26796 | + | 1293 | WP_033481893.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22730 () | 26948..27478 | + | 531 | Protein_26 | DNA topoisomerase III | - |
| XcfCFBP6994P_RS22735 () | 27548..27685 | + | 138 | Protein_27 | IS3 family transposase ISXcd1 | Transposase |
| XcfCFBP6994P_RS22740 () | 27760..28314 | - | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| XcfCFBP6994P_RS22745 () | 28328..28744 | - | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| XcfCFBP6994P_RS22750 () | 28741..28995 | - | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| XcfCFBP6994P_RS22755 () | 29207..29800 | + | 594 | WP_022560487.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| XcfCFBP6994P_RS22760 () | 29797..32826 | + | 3030 | WP_022560486.1 | Tn3 family transposase ISPsy42 | Transposase |
| XcfCFBP6994P_RS22765 () | 32859..33817 | + | 959 | Protein_33 | IS3 family transposase ISXcd1 | Transposase |
| XcfCFBP6994P_RS22770 () | 33907..34155 | + | 249 | WP_042826723.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22785 () | 35439..36491 | - | 1053 | WP_022557730.1 | type III secretion system YopJ family effector AvrBsT | - |
| XcfCFBP6994P_RS23615 () | 36626..36730 | - | 105 | Protein_36 | type III secretion system effector protein | - |
| XcfCFBP6994P_RS22795 () | 37413..38327 | + | 915 | WP_022557729.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22800 () | 38320..39177 | + | 858 | WP_033481873.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| XcfCFBP6994P_RS22805 () | 39356..39817 | + | 462 | WP_039731445.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22810 () | 39858..40094 | + | 237 | Protein_40 | hypothetical protein | - |
| XcfCFBP6994P_RS22815 () | 40098..40424 | + | 327 | WP_033481858.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22820 () | 40447..41046 | + | 600 | WP_022557725.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22825 () | 41083..41691 | - | 609 | WP_040965625.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22840 () | 43013..43336 | + | 324 | WP_022557721.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22845 () | 43896..44171 | + | 276 | WP_022557719.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22850 () | 44750..45148 | + | 399 | WP_039731964.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22855 () | 45275..45601 | + | 327 | Protein_47 | hypothetical protein | - |
| XcfCFBP6994P_RS22860 () | 45713..49728 | - | 4016 | Protein_48 | TAL effector repeat-containing protein | - |
| XcfCFBP6994P_RS22870 () | 49985..50257 | + | 273 | Protein_49 | hypothetical protein | - |
| XcfCFBP6994P_RS22875 () | 50309..50536 | + | 228 | WP_022557753.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22880 () | 50764..51108 | + | 345 | WP_022557752.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22885 () | 51220..51804 | + | 585 | WP_022557751.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22890 () | 52158..52979 | + | 822 | WP_099802905.1 | hypothetical protein | - |
| XcfCFBP6994P_RS23315 () | 53586..53924 | - | 339 | WP_099859120.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22895 () | 53996..54631 | + | 636 | WP_039572177.1 | AAA family ATPase | - |
| XcfCFBP6994P_RS22900 () | 54628..54963 | + | 336 | WP_039572180.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22905 () | 55207..55671 | + | 465 | WP_022557748.1 | DUF2840 domain-containing protein | - |
| XcfCFBP6994P_RS22910 () | 55676..56272 | + | 597 | WP_080948837.1 | S26 family signal peptidase | - |
| XcfCFBP6994P_RS22915 () | 56265..56855 | + | 591 | WP_052756669.1 | Type IV secretion system protein virB1 | VF |
| XcfCFBP6994P_RS22920 () | 57466..60096 | + | 2631 | WP_039572187.1 | hypothetical protein | Relaxase |
| XcfCFBP6994P_RS23620 () | 60880..62151 | + | 1272 | Protein_61 | Conjugal transfer protein TraG | VF |
| XcfCFBP6994P_RS22930 () | 62148..62639 | + | 492 | WP_017171863.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22935 () | 62672..63211 | + | 540 | WP_022557742.1 | plasmid pRiA4b ORF-3 family protein | - |
| XcfCFBP6994P_RS22940 () | 63377..63688 | - | 312 | WP_099802907.1 | hypothetical protein | - |
| XcfCFBP6994P_RS22945 () | 63720..64946 | + | 1227 | WP_011345585.1 | IS256 family transposase ISXax1 | Transposase |
| XcfCFBP6994P_RS22950 () | 65328..65774 | + | 447 | WP_039572194.1 | avidin/streptavidin family protein | - |
| XcfCFBP6994P_RS22955 () | 66045..66305 | + | 261 | WP_099828406.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|