MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 67239 bp
Accession: NZ_CP020986 Location: 1..67239 Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6992 Replicon: plasmid pA
Accession: NZ_CP020986 Location: 1..67239 Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6992 Replicon: plasmid pA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XcfCFBP6992P_RS22920 () | 1..1516 | - | 1516 | Protein_0 | DUF853 domain-containing protein | - |
| XcfCFBP6992P_RS22925 () | 1583..1816 | - | 234 | WP_074052351.1 | VirB3 family type IV secretion system protein | - |
| XcfCFBP6992P_RS22930 () | 1852..2172 | - | 321 | WP_017162817.1 | TrbC/VirB2 family protein | - |
| XcfCFBP6992P_RS22935 () | 2246..3249 | - | 1004 | Protein_3 | Putative conjugal transfer protein | VF |
| XcfCFBP6992P_RS22940 () | 3334..3543 | - | 210 | WP_017164018.1 | helix-turn-helix domain-containing protein | - |
| XcfCFBP6992P_RS22945 () | 4246..5064 | - | 819 | WP_039587854.1 | hypothetical protein | - |
| XcfCFBP6992P_RS22950 () | 5640..6029 | - | 390 | WP_039587855.1 | hypothetical protein | - |
| XcfCFBP6992P_RS22955 () | 6172..6618 | - | 447 | WP_039572194.1 | avidin/streptavidin family protein | - |
| XcfCFBP6992P_RS22960 () | 7000..8226 | - | 1227 | WP_011345585.1 | IS256 family transposase ISXax1 | Transposase |
| XcfCFBP6992P_RS22965 () | 8258..8569 | + | 312 | WP_099802907.1 | hypothetical protein | - |
| XcfCFBP6992P_RS22970 () | 8735..9274 | - | 540 | WP_022557742.1 | plasmid pRiA4b ORF-3 family protein | - |
| XcfCFBP6992P_RS22975 () | 9307..9798 | - | 492 | WP_017171863.1 | hypothetical protein | - |
| XcfCFBP6992P_RS24035 () | 9795..11067 | - | 1273 | Protein_12 | Conjugal transfer protein TraG | VF |
| XcfCFBP6992P_RS22985 () | 11851..14481 | - | 2631 | WP_039572187.1 | hypothetical protein | Relaxase |
| XcfCFBP6992P_RS22990 () | 15092..15682 | - | 591 | WP_052756669.1 | Type IV secretion system protein virB1 | VF |
| XcfCFBP6992P_RS22995 () | 15675..16271 | - | 597 | WP_080948837.1 | S26 family signal peptidase | - |
| XcfCFBP6992P_RS23000 () | 16276..16740 | - | 465 | WP_022557748.1 | DUF2840 domain-containing protein | - |
| XcfCFBP6992P_RS23005 () | 16984..17319 | - | 336 | WP_039572180.1 | hypothetical protein | - |
| XcfCFBP6992P_RS23010 () | 17316..17951 | - | 636 | WP_039572177.1 | AAA family ATPase | - |
| XcfCFBP6992P_RS23675 () | 18023..18361 | + | 339 | WP_099859120.1 | hypothetical protein | - |
| XcfCFBP6992P_RS23015 () | 18969..19790 | - | 822 | WP_099802905.1 | hypothetical protein | - |
| XcfCFBP6992P_RS23020 () | 20144..20728 | - | 585 | WP_022557751.1 | hypothetical protein | - |
| XcfCFBP6992P_RS23025 () | 20840..21184 | - | 345 | WP_022557752.1 | hypothetical protein | - |
| XcfCFBP6992P_RS23030 () | 21412..21639 | - | 228 | WP_022557753.1 | hypothetical protein | - |
| XcfCFBP6992P_RS23035 () | 21691..21963 | - | 273 | Protein_24 | hypothetical protein | - |
| XcfCFBP6992P_RS23045 () | 22220..26236 | + | 4017 | WP_099802904.1 | TAL effector repeat-containing protein | - |
| XcfCFBP6992P_RS23050 () | 26348..26674 | - | 327 | Protein_26 | hypothetical protein | - |
| XcfCFBP6992P_RS23055 () | 26801..27199 | - | 399 | WP_039731964.1 | hypothetical protein | - |
| XcfCFBP6992P_RS23060 () | 27778..28053 | - | 276 | WP_022557719.1 | hypothetical protein | - |
| XcfCFBP6992P_RS23065 () | 28613..28936 | - | 324 | WP_022557721.1 | hypothetical protein | - |
| XcfCFBP6992P_RS23080 () | 30258..30866 | + | 609 | WP_040965625.1 | hypothetical protein | - |
| XcfCFBP6992P_RS23085 () | 30903..31502 | - | 600 | WP_022557725.1 | hypothetical protein | - |
| XcfCFBP6992P_RS23090 () | 31525..31851 | - | 327 | WP_033481858.1 | hypothetical protein | - |
| XcfCFBP6992P_RS23095 () | 31855..32091 | - | 237 | Protein_33 | hypothetical protein | - |
| XcfCFBP6992P_RS23100 () | 32132..32593 | - | 462 | WP_039731445.1 | hypothetical protein | - |
| XcfCFBP6992P_RS23105 () | 32772..33629 | - | 858 | WP_033481873.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| XcfCFBP6992P_RS23110 () | 33622..34536 | - | 915 | WP_022557729.1 | hypothetical protein | - |
| XcfCFBP6992P_RS24040 () | 35219..35323 | + | 105 | Protein_37 | type III secretion system effector protein | - |
| XcfCFBP6992P_RS23120 () | 35458..36510 | + | 1053 | WP_022557730.1 | type III secretion system YopJ family effector AvrBsT | - |
| XcfCFBP6992P_RS23135 () | 37794..38042 | - | 249 | WP_042826723.1 | hypothetical protein | - |
| XcfCFBP6992P_RS23140 () | 38132..39090 | - | 959 | Protein_40 | IS3 family transposase ISXcd1 | Transposase |
| XcfCFBP6992P_RS23145 () | 39123..42152 | - | 3030 | WP_022560486.1 | Tn3 family transposase ISPsy42 | Transposase |
| XcfCFBP6992P_RS23150 () | 42149..42742 | - | 594 | WP_022560487.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| XcfCFBP6992P_RS23155 () | 42954..43208 | + | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| XcfCFBP6992P_RS23160 () | 43205..43621 | + | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| XcfCFBP6992P_RS23165 () | 43635..44189 | + | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| XcfCFBP6992P_RS23170 () | 44264..44401 | - | 138 | Protein_46 | IS3 family transposase ISXcd1 | Transposase |
| XcfCFBP6992P_RS23175 () | 44471..45001 | - | 531 | Protein_47 | DNA topoisomerase III | - |
| XcfCFBP6992P_RS23180 () | 45153..46445 | - | 1293 | WP_033481893.1 | hypothetical protein | - |
| XcfCFBP6992P_RS23185 () | 46572..47891 | - | 1320 | WP_022557736.1 | DUF4990 domain-containing protein | - |
| XcfCFBP6992P_RS23195 () | 48290..49120 | - | 831 | Protein_50 | DNA topoisomerase III | - |
| XcfCFBP6992P_RS23200 () | 49122..49370 | - | 249 | WP_033481882.1 | hypothetical protein | - |
| XcfCFBP6992P_RS23205 () | 49443..49682 | - | 240 | WP_005997461.1 | hypothetical protein | - |
| XcfCFBP6992P_RS23210 () | 49693..49899 | - | 207 | WP_017164026.1 | hypothetical protein | - |
| XcfCFBP6992P_RS23215 () | 50072..51424 | - | 1353 | WP_046735872.1 | TrbI/VirB10 family protein | - |
| XcfCFBP6992P_RS23220 () | 51440..52432 | - | 993 | WP_017164024.1 | P-type conjugative transfer protein TrbG | - |
| XcfCFBP6992P_RS23225 () | 52459..53169 | - | 711 | WP_039574290.1 | type IV secretory pathway, TrbF protein | - |
| XcfCFBP6992P_RS23230 () | 53176..54654 | - | 1479 | WP_046735871.1 | P-type conjugative transfer protein TrbL | - |
| XcfCFBP6992P_RS23680 () | 54872..55225 | - | 354 | WP_127446653.1 | hypothetical protein | - |
| XcfCFBP6992P_RS23235 () | 55222..55995 | - | 774 | WP_039570072.1 | conjugal transfer protein | - |
| XcfCFBP6992P_RS23240 () | 56014..58584 | - | 2571 | WP_039570074.1 | DUF853 family protein | - |
| XcfCFBP6992P_RS23245 () | 58651..58884 | - | 234 | WP_074052351.1 | VirB3 family type IV secretion system protein | - |
| XcfCFBP6992P_RS23250 () | 58920..59240 | - | 321 | WP_017162817.1 | TrbC/VirB2 family protein | - |
| XcfCFBP6992P_RS23255 () | 59315..60319 | - | 1005 | WP_017164019.1 | Putative conjugal transfer protein | VF |
| XcfCFBP6992P_RS23260 () | 60404..60613 | - | 210 | WP_017164018.1 | helix-turn-helix domain-containing protein | - |
| XcfCFBP6992P_RS23265 () | 61316..62134 | - | 819 | WP_039587854.1 | hypothetical protein | - |
| XcfCFBP6992P_RS23270 () | 62710..63099 | - | 390 | WP_039587855.1 | hypothetical protein | - |
| XcfCFBP6992P_RS23275 () | 63242..63688 | - | 447 | WP_039572194.1 | avidin/streptavidin family protein | - |
| XcfCFBP6992P_RS23280 () | 64070..65296 | - | 1227 | WP_011345585.1 | IS256 family transposase ISXax1 | Transposase |
| XcfCFBP6992P_RS23285 () | 65328..65639 | + | 312 | WP_099802907.1 | hypothetical protein | - |
| XcfCFBP6992P_RS23290 () | 65815..66304 | - | 490 | Protein_70 | plasmid pRiA4b ORF-3 family protein | - |
| XcfCFBP6992P_RS23295 () | 66358..66868 | - | 511 | Protein_71 | hypothetical protein | - |
| XcfCFBP6992P_RS23300 () | 66865..67237 | - | 373 | Protein_72 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|