MGE detailed information
MGE type: Genomic_island MGE length: 37625 bp
Accession: NZ_CP020981 Location: 985856..1023480 Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6989 Replicon: chromosome
Accession: NZ_CP020981 Location: 985856..1023480 Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6989 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XcfCFBP6989P_RS04185 () | 983345..984730 | + | 1386 | WP_007971433.1 | LOG family protein | - |
| XcfCFBP6989P_RS04190 () | 984856..985374 | + | 519 | WP_099802822.1 | Tfp pilus assembly protein FimT/FimU | - |
| XcfCFBP6989P_RS04195 () | 985371..985850 | + | 480 | WP_099801986.1 | type IV pilus modification protein PilV | - |
| XcfCFBP6989P_RS04200 () | 985856..987016 | + | 1161 | WP_099801985.1 | PilW family protein | - |
| XcfCFBP6989P_RS04205 () | 987019..987546 | + | 528 | WP_099802821.1 | pilus assembly protein | - |
| XcfCFBP6989P_RS04210 () | 987557..991303 | + | 3747 | WP_089112126.1 | pilus assembly protein | - |
| XcfCFBP6989P_RS04215 () | 991336..991743 | + | 408 | WP_005920246.1 | Fimbrial protein | VF |
| XcfCFBP6989P_RS04225 () | 991926..992468 | - | 543 | WP_099801984.1 | GspH/FimT family pseudopilin | - |
| XcfCFBP6989P_RS04230 () | 992607..994628 | + | 2022 | WP_099801983.1 | excinuclease ABC subunit UvrB | - |
| XcfCFBP6989P_RS04240 () | 994929..995531 | + | 603 | WP_145958292.1 | hypothetical protein | - |
| XcfCFBP6989P_RS04245 () | 995516..995968 | - | 453 | WP_099801981.1 | Rha family transcriptional regulator | - |
| XcfCFBP6989P_RS23440 () | 996105..996716 | + | 612 | WP_145958291.1 | hypothetical protein | - |
| XcfCFBP6989P_RS04250 () | 996823..997008 | + | 186 | WP_199428842.1 | hypothetical protein | - |
| XcfCFBP6989P_RS04255 () | 997161..997565 | - | 405 | WP_145982132.1 | hypothetical protein | - |
| XcfCFBP6989P_RS04260 () | 997741..998131 | - | 391 | Protein_792 | head decoration protein | - |
| XcfCFBP6989P_RS04270 () | 998586..999053 | - | 468 | WP_099801978.1 | hypothetical protein | - |
| XcfCFBP6989P_RS04275 () | 999067..999501 | - | 435 | WP_099801977.1 | hypothetical protein | - |
| XcfCFBP6989P_RS04280 () | 999494..999796 | - | 303 | WP_099801976.1 | hypothetical protein | - |
| XcfCFBP6989P_RS04285 () | 1000045..1000353 | - | 309 | WP_145958289.1 | helix-turn-helix domain-containing protein | - |
| XcfCFBP6989P_RS04290 () | 1000471..1000701 | - | 231 | WP_145958381.1 | hypothetical protein | - |
| XcfCFBP6989P_RS04295 () | 1000722..1001048 | - | 327 | WP_145958287.1 | hypothetical protein | - |
| XcfCFBP6989P_RS04300 () | 1001045..1001326 | - | 282 | WP_099801972.1 | hypothetical protein | - |
| XcfCFBP6989P_RS04305 () | 1001562..1001921 | - | 360 | WP_099863717.1 | helix-turn-helix domain-containing protein | - |
| XcfCFBP6989P_RS04310 () | 1002053..1002400 | - | 348 | WP_099801970.1 | hypothetical protein | - |
| XcfCFBP6989P_RS04315 () | 1002393..1002659 | - | 267 | WP_099801969.1 | hypothetical protein | - |
| XcfCFBP6989P_RS04320 () | 1002656..1002835 | - | 180 | WP_099801968.1 | hypothetical protein | - |
| XcfCFBP6989P_RS04325 () | 1002832..1003035 | - | 204 | WP_099801967.1 | hypothetical protein | - |
| XcfCFBP6989P_RS04330 () | 1003032..1003373 | - | 342 | WP_099801966.1 | hypothetical protein | - |
| XcfCFBP6989P_RS04335 () | 1003457..1003654 | - | 198 | WP_099801965.1 | hypothetical protein | - |
| XcfCFBP6989P_RS23885 () | 1003651..1003842 | - | 192 | WP_193588907.1 | helix-turn-helix domain-containing protein | - |
| XcfCFBP6989P_RS04345 () | 1003919..1004548 | + | 630 | WP_145958286.1 | hypothetical protein | - |
| XcfCFBP6989P_RS04350 () | 1005001..1005315 | + | 315 | WP_099802820.1 | hypothetical protein | Toxin Detail |
| XcfCFBP6989P_RS04355 () | 1005315..1005605 | + | 291 | WP_099802819.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| XcfCFBP6989P_RS04360 () | 1005597..1006826 | - | 1230 | WP_158526043.1 | IS91 family transposase ISCARN110 | Transposase |
| XcfCFBP6989P_RS04365 () | 1007692..1007934 | + | 243 | WP_022559483.1 | hypothetical protein | - |
| XcfCFBP6989P_RS04370 () | 1007971..1009644 | + | 1674 | WP_089095178.1 | Protein VirD4 | VF |
| XcfCFBP6989P_RS04375 () | 1009978..1010388 | + | 411 | WP_005914237.1 | TcpQ domain-containing protein | - |
| XcfCFBP6989P_RS04380 () | 1010513..1011544 | + | 1032 | WP_162808415.1 | Type IV secretion system protein virB8 | VF |
| XcfCFBP6989P_RS04385 () | 1011541..1012308 | + | 768 | WP_005920257.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| XcfCFBP6989P_RS04390 () | 1012698..1013474 | + | 777 | WP_174232377.1 | Type IV secretion system protein virB10 | VF |
| XcfCFBP6989P_RS04395 () | 1013480..1014529 | + | 1050 | WP_174232339.1 | Type IV secretion system protein VirB11 | VF |
| XcfCFBP6989P_RS04400 () | 1014592..1015422 | + | 831 | WP_162808467.1 | Type IV secretion system protein virB1 | VF |
| XcfCFBP6989P_RS04405 () | 1015479..1015895 | + | 417 | WP_078566587.1 | Type IV secretion system protein virB2 | VF |
| XcfCFBP6989P_RS04410 () | 1015888..1016199 | + | 312 | WP_005920266.1 | Type IV secretion system protein virB3 | VF |
| XcfCFBP6989P_RS04415 () | 1016299..1018752 | + | 2454 | WP_099801960.1 | Type IV secretion system protein virB4 | VF |
| XcfCFBP6989P_RS04420 () | 1018745..1019569 | + | 825 | WP_174232338.1 | hypothetical protein | - |
| XcfCFBP6989P_RS04425 () | 1019666..1020745 | + | 1080 | WP_099801958.1 | hypothetical protein | VF |
| XcfCFBP6989P_RS04430 () | 1020757..1021254 | + | 498 | WP_099801957.1 | DUF4189 domain-containing protein | - |
| XcfCFBP6989P_RS04435 () | 1021446..1022072 | + | 627 | WP_099801956.1 | FG-GAP repeat protein | - |
| XcfCFBP6989P_RS23445 () | 1022179..1023480 | + | 1302 | WP_108722877.1 | Zinc D-Ala-D-Ala carboxypeptidase | VF |
| XcfCFBP6989P_RS04455 () | 1023819..1025435 | + | 1617 | WP_099801954.1 | alpha glucosidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|