MGE detailed information
MGE type: IScluster/Tn MGE length: 6270 bp
Accession: NZ_CP020980 Location: 55746..62015 Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6988R Replicon: plasmid pA
Accession: NZ_CP020980 Location: 55746..62015 Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6988R Replicon: plasmid pA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XcfCFBP6988P_RS23360 () | 51236..52150 | - | 915 | WP_022557729.1 | hypothetical protein | - |
| XcfCFBP6988P_RS24055 () | 52833..52937 | + | 105 | Protein_56 | type III secretion system effector protein | - |
| XcfCFBP6988P_RS23370 () | 53072..54124 | + | 1053 | WP_022557730.1 | type III secretion system YopJ family effector AvrBsT | - |
| XcfCFBP6988P_RS23385 () | 55408..55656 | - | 249 | WP_042826723.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23390 () | 55746..56704 | - | 959 | Protein_59 | IS3 family transposase ISXcd1 | Transposase |
| XcfCFBP6988P_RS23395 () | 56737..59766 | - | 3030 | WP_022560486.1 | Tn3 family transposase ISPsy42 | Transposase |
| XcfCFBP6988P_RS23400 () | 59763..60356 | - | 594 | WP_022560487.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| XcfCFBP6988P_RS23405 () | 60568..60822 | + | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| XcfCFBP6988P_RS23410 () | 60819..61235 | + | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| XcfCFBP6988P_RS23415 () | 61249..61803 | + | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| XcfCFBP6988P_RS23420 () | 61878..62015 | - | 138 | Protein_65 | IS3 family transposase ISXcd1 | Transposase |
| XcfCFBP6988P_RS23425 () | 62085..62615 | - | 531 | Protein_66 | DNA topoisomerase III | - |
| XcfCFBP6988P_RS23430 () | 62767..64059 | - | 1293 | WP_033481893.1 | hypothetical protein | - |
| XcfCFBP6988P_RS23435 () | 64186..65505 | - | 1320 | WP_022557736.1 | DUF4990 domain-containing protein | - |
| XcfCFBP6988P_RS23445 () | 65904..66734 | - | 831 | Protein_69 | DNA topoisomerase III | - |
| XcfCFBP6988P_RS23450 () | 66736..66984 | - | 249 | WP_033481882.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|