MGE detailed information
MGE type: IScluster/Tn MGE length: 19757 bp
Accession: NZ_CP020973 Location: 17886..37642 Organism: Xanthomonas phaseoli pv. phaseoli strain CFBP6546R Replicon: plasmid pC
Accession: NZ_CP020973 Location: 17886..37642 Organism: Xanthomonas phaseoli pv. phaseoli strain CFBP6546R Replicon: plasmid pC
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XppCFBP6546P_RS22240 (XppCFBP6546P_23355) | 13701..15062 | - | 1362 | WP_201417380.1 | type IV secretion system DNA-binding domain-containing protein | - |
| XppCFBP6546P_RS22775 | 15120..15248 | - | 129 | WP_256359351.1 | hypothetical protein | - |
| XppCFBP6546P_RS22245 (XppCFBP6546P_23360) | 15252..15590 | - | 339 | WP_022560519.1 | hypothetical protein | - |
| XppCFBP6546P_RS22250 (XppCFBP6546P_23365) | 15975..16421 | + | 447 | WP_022560518.1 | hypothetical protein | - |
| XppCFBP6546P_RS22255 (XppCFBP6546P_23370) | 16431..17132 | + | 702 | WP_022560517.1 | StbB family protein | - |
| XppCFBP6546P_RS22260 (XppCFBP6546P_23375) | 17180..17527 | + | 348 | WP_022560516.1 | hypothetical protein | - |
| XppCFBP6546P_RS22265 (XppCFBP6546P_23385) | 17886..19112 | + | 1227 | WP_011345585.1 | IS256 family transposase ISXax1 | Transposase |
| XppCFBP6546P_RS22270 (XppCFBP6546P_23390) | 19150..19722 | - | 573 | Protein_21 | IS256 family transposase ISXax1 | Transposase |
| XppCFBP6546P_RS22275 (XppCFBP6546P_23395) | 19790..20533 | + | 744 | Protein_22 | IS3 family transposase ISXac2 | Transposase |
| XppCFBP6546P_RS22280 (XppCFBP6546P_23400) | 20708..20995 | - | 288 | WP_022560525.1 | hypothetical protein | - |
| XppCFBP6546P_RS22740 | 22847..25351 | + | 2505 | WP_236493581.1 | type III secretion system effector protein XopC | - |
| XppCFBP6546P_RS22295 (XppCFBP6546P_23420) | 25904..26605 | - | 702 | Protein_26 | IS3 family transposase ISXac2 | Transposase |
| XppCFBP6546P_RS22300 (XppCFBP6546P_23425) | 26699..27253 | - | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| XppCFBP6546P_RS22305 (XppCFBP6546P_23430) | 27267..27683 | - | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| XppCFBP6546P_RS22310 (XppCFBP6546P_23435) | 27680..27934 | - | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| XppCFBP6546P_RS22315 (XppCFBP6546P_23440) | 28146..28739 | + | 594 | WP_022560487.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| XppCFBP6546P_RS22320 (XppCFBP6546P_23445) | 28736..31765 | + | 3030 | WP_022560486.1 | Tn3 family transposase ISPsy42 | Transposase |
| XppCFBP6546P_RS22325 (XppCFBP6546P_23450) | 31797..32173 | - | 377 | Protein_32 | IS3 family transposase ISXac2 | Transposase |
| XppCFBP6546P_RS22330 (XppCFBP6546P_23460) | 32425..32745 | + | 321 | WP_033481941.1 | ParC family partition-associated protein | - |
| XppCFBP6546P_RS22335 (XppCFBP6546P_23465) | 32924..34417 | + | 1494 | WP_022560531.1 | hypothetical protein | - |
| XppCFBP6546P_RS22340 (XppCFBP6546P_23470) | 34680..34952 | + | 273 | WP_046121237.1 | hypothetical protein | - |
| XppCFBP6546P_RS22345 (XppCFBP6546P_23475) | 35265..35906 | + | 642 | WP_039575435.1 | DNA-binding protein | - |
| XppCFBP6546P_RS22350 (XppCFBP6546P_23480) | 35919..36488 | + | 570 | WP_022560534.1 | restriction endonuclease | - |
| XppCFBP6546P_RS22355 (XppCFBP6546P_23485) | 36555..37642 | - | 1088 | Protein_38 | IS3 family transposase ISXac2 | Transposase |
| XppCFBP6546P_RS22360 (XppCFBP6546P_23200) | 37833..38084 | + | 252 | WP_039573365.1 | hypothetical protein | - |
| XppCFBP6546P_RS22365 (XppCFBP6546P_23210) | 38485..41991 | + | 3507 | WP_099770699.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| XppCFBP6546P_RS22370 (XppCFBP6546P_23215) | 42136..42345 | + | 210 | WP_068839383.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|