MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 72754 bp
Accession: NZ_CP020971 Location: 4945616..5018369 Organism: Xanthomonas phaseoli pv. phaseoli strain CFBP6546R Replicon: chromosome
Accession: NZ_CP020971 Location: 4945616..5018369 Organism: Xanthomonas phaseoli pv. phaseoli strain CFBP6546R Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XppCFBP6546P_RS21290 (XppCFBP6546P_12385) | 4940765..4942111 | + | 1347 | WP_082321407.1 | PrgH/EprH family type III secretion apparatus protein | - |
| XppCFBP6546P_RS21295 (XppCFBP6546P_12380) | 4942108..4942413 | + | 306 | WP_080950357.1 | type III secretion system needle filament subunit SctF | - |
| XppCFBP6546P_RS21300 (XppCFBP6546P_12375) | 4942479..4942763 | + | 285 | WP_039571032.1 | type III secretion system inner rod subunit SctI | - |
| XppCFBP6546P_RS21305 (XppCFBP6546P_12370) | 4942770..4943651 | + | 882 | WP_127446628.1 | type III secretion inner membrane ring lipoprotein SctJ | - |
| XppCFBP6546P_RS21310 (XppCFBP6546P_12365) | 4943648..4944244 | + | 597 | WP_080949130.1 | hypothetical protein | - |
| XppCFBP6546P_RS21315 (XppCFBP6546P_12360) | 4944216..4944890 | + | 675 | WP_039571029.1 | hypothetical protein | - |
| XppCFBP6546P_RS21320 (XppCFBP6546P_12355) | 4944887..4945120 | + | 234 | WP_039571027.1 | hypothetical protein | - |
| XppCFBP6546P_RS21325 (XppCFBP6546P_12350) | 4945302..4945616 | + | 315 | WP_039571026.1 | DUF1153 domain-containing protein | - |
| XppCFBP6546P_RS21330 (XppCFBP6546P_12345) | 4945616..4946431 | + | 816 | WP_103412538.1 | IS3 family transposase ISKpn40 | Transposase |
| XppCFBP6546P_RS21335 (XppCFBP6546P_24100) | 4946540..4946761 | + | 222 | WP_127446629.1 | hypothetical protein | - |
| XppCFBP6546P_RS21345 (XppCFBP6546P_12330) | 4949467..4949727 | + | 261 | WP_039575117.1 | hypothetical protein | - |
| XppCFBP6546P_RS21350 (XppCFBP6546P_12325) | 4949717..4950796 | + | 1080 | WP_103412539.1 | hypothetical protein ; Integrase | Integrase |
| XppCFBP6546P_RS21355 (XppCFBP6546P_12320) | 4950861..4951948 | + | 1088 | WP_099770635.1 | IS3 family transposase ISXac2 | Transposase |
| XppCFBP6546P_RS21360 (XppCFBP6546P_12315) | 4952359..4953378 | + | 1020 | WP_236493843.1 | hypothetical protein | - |
| XppCFBP6546P_RS21365 (XppCFBP6546P_12310) | 4953701..4954087 | - | 387 | WP_229006711.1 | hypothetical protein | - |
| XppCFBP6546P_RS21370 (XppCFBP6546P_24105) | 4954524..4954931 | + | 408 | WP_127446631.1 | hypothetical protein | - |
| XppCFBP6546P_RS21375 (XppCFBP6546P_12305) | 4954890..4956425 | - | 1536 | WP_080948716.1 | MASE1 domain-containing protein | - |
| XppCFBP6546P_RS21380 (XppCFBP6546P_24110) | 4956800..4957540 | + | 741 | WP_150115861.1 | hypothetical protein | - |
| XppCFBP6546P_RS21385 (XppCFBP6546P_12300) | 4957560..4958012 | + | 453 | WP_039575123.1 | HD domain-containing protein | - |
| XppCFBP6546P_RS22715 | 4958490..4959059 | - | 570 | WP_074052307.1 | hypothetical protein | - |
| XppCFBP6546P_RS22720 | 4959076..4959564 | - | 489 | WP_046735948.1 | DUF6283 family protein | - |
| XppCFBP6546P_RS21395 (XppCFBP6546P_12285) | 4960094..4960831 | - | 738 | WP_039574675.1 | hypothetical protein | - |
| XppCFBP6546P_RS21400 (XppCFBP6546P_12280) | 4960836..4961858 | - | 1023 | WP_127447083.1 | conjugal transfer protein TraN | - |
| XppCFBP6546P_RS21405 (XppCFBP6546P_12275) | 4961998..4962981 | + | 984 | WP_022557821.1 | IS5 family transposase ISXfu1 | Transposase |
| XppCFBP6546P_RS21410 (XppCFBP6546P_24115) | 4963085..4963849 | - | 765 | WP_127446633.1 | hypothetical protein | - |
| XppCFBP6546P_RS21415 (XppCFBP6546P_12265) | 4963866..4965023 | - | 1158 | WP_074052150.1 | TraU family protein | - |
| XppCFBP6546P_RS21420 (XppCFBP6546P_12260) | 4965020..4966339 | - | 1320 | WP_039575264.1 | TrbC family F-type conjugative pilus assembly protein | - |
| XppCFBP6546P_RS21425 (XppCFBP6546P_12255) | 4966333..4966854 | - | 522 | WP_127446636.1 | S26 family signal peptidase | - |
| XppCFBP6546P_RS21430 (XppCFBP6546P_12250) | 4966851..4967087 | - | 237 | WP_046736092.1 | hypothetical protein | - |
| XppCFBP6546P_RS22725 | 4967125..4967274 | + | 150 | Protein_4222 | IS3 family transposase ISXac3 | Transposase |
| XppCFBP6546P_RS21435 (XppCFBP6546P_12245) | 4967247..4968269 | + | 1023 | WP_236493351.1 | IS3 family transposase ISXac3 | Transposase |
| XppCFBP6546P_RS21440 (XppCFBP6546P_12240) | 4968554..4969641 | + | 1088 | WP_087944778.1 | IS3 family transposase ISXac2 | Transposase |
| XppCFBP6546P_RS21445 (XppCFBP6546P_12225) | 4969638..4972031 | - | 2394 | WP_103412540.1 | type IV secretion system protein TraC | - |
| XppCFBP6546P_RS21450 (XppCFBP6546P_12220) | 4972050..4972418 | - | 369 | WP_039575799.1 | TraA family conjugative transfer protein | - |
| XppCFBP6546P_RS21455 (XppCFBP6546P_12215) | 4972437..4973126 | - | 690 | WP_127446637.1 | TraV family lipoprotein | - |
| XppCFBP6546P_RS21460 (XppCFBP6546P_12210) | 4973199..4974371 | - | 1173 | WP_052756682.1 | TraB/VirB10 family protein | - |
| XppCFBP6546P_RS21465 (XppCFBP6546P_12205) | 4974423..4975510 | + | 1088 | WP_099770635.1 | IS3 family transposase ISXac2 | Transposase |
| XppCFBP6546P_RS21470 (XppCFBP6546P_12200) | 4975549..4975791 | + | 243 | Protein_4230 | restriction endonuclease | - |
| XppCFBP6546P_RS21480 (XppCFBP6546P_24120) | 4976972..4977265 | - | 294 | WP_143707755.1 | hypothetical protein | - |
| XppCFBP6546P_RS21485 (XppCFBP6546P_12190) | 4977289..4977600 | - | 312 | WP_052756667.1 | hypothetical protein | - |
| XppCFBP6546P_RS21490 (XppCFBP6546P_24125) | 4977593..4978198 | - | 606 | WP_127447084.1 | hypothetical protein | - |
| XppCFBP6546P_RS21495 (XppCFBP6546P_12180) | 4978382..4978573 | - | 192 | WP_080948735.1 | hypothetical protein | - |
| XppCFBP6546P_RS21500 (XppCFBP6546P_12175) | 4978992..4982639 | - | 3648 | WP_039574563.1 | urea carboxylase | - |
| XppCFBP6546P_RS21505 (XppCFBP6546P_12170) | 4982723..4984522 | - | 1800 | WP_039574561.1 | allophanate hydrolase | - |
| XppCFBP6546P_RS21510 (XppCFBP6546P_12160) | 4984872..4985348 | - | 477 | WP_039574558.1 | nuclear transport factor 2 family protein | - |
| XppCFBP6546P_RS21515 (XppCFBP6546P_12155) | 4985412..4985981 | - | 570 | WP_039574571.1 | TetR family transcriptional regulator | - |
| XppCFBP6546P_RS21520 (XppCFBP6546P_12150) | 4986098..4986670 | - | 573 | WP_017158948.1 | TetR/AcrR family transcriptional regulator | - |
| XppCFBP6546P_RS21525 (XppCFBP6546P_12145) | 4986755..4987498 | + | 744 | WP_039574556.1 | Glucose 1-dehydrogenase | VF |
| XppCFBP6546P_RS21530 (XppCFBP6546P_12140) | 4987864..4988382 | - | 519 | WP_039574553.1 | hypothetical protein | - |
| XppCFBP6546P_RS21540 (XppCFBP6546P_12130) | 4988810..4989160 | - | 351 | WP_236493384.1 | hypothetical protein | - |
| XppCFBP6546P_RS21545 (XppCFBP6546P_12125) | 4989375..4989707 | + | 333 | WP_003482333.1 | hypothetical protein | - |
| XppCFBP6546P_RS21555 (XppCFBP6546P_12115) | 4990022..4991947 | + | 1926 | WP_039574551.1 | M61 family metallopeptidase | - |
| XppCFBP6546P_RS21560 (XppCFBP6546P_12110) | 4992015..4992194 | + | 180 | WP_039574549.1 | hypothetical protein | - |
| XppCFBP6546P_RS21565 (XppCFBP6546P_12105) | 4992297..4993685 | - | 1389 | WP_039574546.1 | type III secretion system effector XopQ | - |
| XppCFBP6546P_RS21570 (XppCFBP6546P_12095) | 4994040..4994330 | - | 291 | WP_017156025.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| XppCFBP6546P_RS21575 (XppCFBP6546P_24130) | 4994348..4994461 | - | 114 | WP_017156024.1 | hypothetical protein | Toxin Detail |
| XppCFBP6546P_RS21580 (XppCFBP6546P_12085) | 4994726..4997233 | - | 2508 | WP_046834789.1 | AAA family ATPase | - |
| XppCFBP6546P_RS21585 (XppCFBP6546P_12080) | 4997421..5001407 | - | 3987 | WP_039569010.1 | exodeoxyribonuclease V subunit beta | - |
| XppCFBP6546P_RS21590 (XppCFBP6546P_12075) | 5001404..5004808 | - | 3405 | WP_039569011.1 | exodeoxyribonuclease V subunit gamma | - |
| XppCFBP6546P_RS21595 (XppCFBP6546P_12070) | 5005161..5009900 | - | 4740 | WP_039569012.1 | putative Ig domain-containing protein | - |
| XppCFBP6546P_RS21600 (XppCFBP6546P_12065) | 5010198..5010749 | + | 552 | WP_017165353.1 | tail fiber protein | - |
| XppCFBP6546P_RS21605 (XppCFBP6546P_12060) | 5010797..5011324 | + | 528 | WP_039569016.1 | tail fiber protein | - |
| XppCFBP6546P_RS21610 (XppCFBP6546P_12055) | 5011384..5011919 | + | 536 | Protein_4256 | tail fiber protein | - |
| XppCFBP6546P_RS21615 (XppCFBP6546P_12050) | 5011929..5012477 | + | 549 | WP_039569019.1 | hypothetical protein | VF |
| XppCFBP6546P_RS21620 (XppCFBP6546P_12045) | 5012496..5012783 | - | 288 | WP_017158959.1 | hypothetical protein | - |
| XppCFBP6546P_RS21625 (XppCFBP6546P_12040) | 5013165..5013959 | + | 795 | WP_017156015.1 | putative phospholipid import ATP-binding protein MlaF | VF |
| XppCFBP6546P_RS21630 (XppCFBP6546P_12035) | 5013959..5014708 | + | 750 | WP_011349188.1 | MlaE family lipid ABC transporter permease subunit | - |
| XppCFBP6546P_RS21635 (XppCFBP6546P_12030) | 5014720..5015265 | + | 546 | WP_005912377.1 | outer membrane lipid asymmetry maintenance protein MlaD | - |
| XppCFBP6546P_RS21640 (XppCFBP6546P_12025) | 5015262..5015924 | + | 663 | WP_011349189.1 | ABC transporter substrate-binding protein | - |
| XppCFBP6546P_RS21645 (XppCFBP6546P_12020) | 5015914..5016204 | + | 291 | WP_039569023.1 | STAS domain-containing protein | - |
| XppCFBP6546P_RS21650 (XppCFBP6546P_12015) | 5016215..5017270 | + | 1056 | WP_039569025.1 | VacJ family lipoprotein | - |
| XppCFBP6546P_RS21660 (XppCFBP6546P_24135) | 5018626..5018793 | - | 168 | WP_157926379.1 | hypothetical protein | - |
| XppCFBP6546P_RS21665 (XppCFBP6546P_12005) | 5018824..5019369 | - | 546 | WP_039571216.1 | glutathione peroxidase | - |
| XppCFBP6546P_RS21670 (XppCFBP6546P_12000) | 5019523..5019900 | - | 378 | WP_039571219.1 | hypothetical protein | - |
| XppCFBP6546P_RS21675 (XppCFBP6546P_11995) | 5020116..5021648 | - | 1533 | WP_180301640.1 | DNA recombination protein RmuC | - |
| XppCFBP6546P_RS21680 (XppCFBP6546P_11990) | 5021877..5022884 | - | 1008 | WP_039571231.1 | zinc-binding alcohol dehydrogenase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|