MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 66609 bp
Accession: NZ_CP020965 Location: 1..66609 Organism: Xanthomonas phaseoli pv. phaseoli strain CFBP412 Replicon: plasmid pA
Accession: NZ_CP020965 Location: 1..66609 Organism: Xanthomonas phaseoli pv. phaseoli strain CFBP412 Replicon: plasmid pA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XppCFBP412P_RS22920 () | 390..3020 | + | 2631 | WP_039583566.1 | hypothetical protein | Relaxase |
| XppCFBP412P_RS24075 () | 3804..5076 | + | 1273 | Protein_1 | Conjugal transfer protein TraG | VF |
| XppCFBP412P_RS22930 () | 5073..5564 | + | 492 | WP_039583571.1 | hypothetical protein | - |
| XppCFBP412P_RS22935 () | 5597..6136 | + | 540 | WP_017154820.1 | plasmid pRiA4b ORF-3 family protein | - |
| XppCFBP412P_RS22940 () | 6302..6586 | - | 285 | WP_017154819.1 | hypothetical protein | - |
| XppCFBP412P_RS22945 () | 6916..7362 | + | 447 | WP_022557741.1 | avidin/streptavidin family protein | - |
| XppCFBP412P_RS22950 () | 7830..8219 | + | 390 | WP_046830524.1 | hypothetical protein | - |
| XppCFBP412P_RS22955 () | 8732..9550 | + | 819 | WP_046830525.1 | hypothetical protein | - |
| XppCFBP412P_RS22960 () | 10207..10464 | + | 258 | WP_074038434.1 | helix-turn-helix domain-containing protein | - |
| XppCFBP412P_RS22965 () | 10609..11565 | + | 957 | WP_017162816.1 | Putative conjugal transfer protein | VF |
| XppCFBP412P_RS22970 () | 11639..11959 | + | 321 | WP_017162817.1 | TrbC/VirB2 family protein | - |
| XppCFBP412P_RS22975 () | 11995..12228 | + | 234 | WP_074052351.1 | VirB3 family type IV secretion system protein | - |
| XppCFBP412P_RS22980 () | 12295..14864 | + | 2570 | Protein_12 | DUF853 domain-containing protein | - |
| XppCFBP412P_RS22985 () | 14883..15668 | + | 786 | WP_017160737.1 | conjugal transfer protein | - |
| XppCFBP412P_RS23825 () | 16036..16389 | + | 354 | WP_127172325.1 | hypothetical protein | - |
| XppCFBP412P_RS22990 () | 16448..17929 | + | 1482 | WP_039583452.1 | P-type conjugative transfer protein TrbL | - |
| XppCFBP412P_RS22995 () | 17936..18646 | + | 711 | WP_039583455.1 | type IV secretory pathway, TrbF protein | - |
| XppCFBP412P_RS23000 () | 18673..19665 | + | 993 | WP_017164024.1 | P-type conjugative transfer protein TrbG | - |
| XppCFBP412P_RS23005 () | 19681..21033 | + | 1353 | WP_039583456.1 | TrbI/VirB10 family protein | - |
| XppCFBP412P_RS23010 () | 21206..21412 | + | 207 | WP_017164026.1 | hypothetical protein | - |
| XppCFBP412P_RS23015 () | 21423..21662 | + | 240 | WP_005997461.1 | hypothetical protein | - |
| XppCFBP412P_RS23020 () | 21735..21983 | + | 249 | WP_039583459.1 | hypothetical protein | - |
| XppCFBP412P_RS23025 () | 21985..23736 | + | 1752 | WP_080950332.1 | DNA topoisomerase III | - |
| XppCFBP412P_RS23030 () | 23825..27433 | - | 3609 | WP_099800127.1 | TAL effector repeat-containing protein | - |
| XppCFBP412P_RS23035 () | 27689..27823 | + | 135 | Protein_24 | IS5 family transposase IS1646 | Transposase |
| XppCFBP412P_RS23045 () | 28323..29600 | - | 1278 | WP_046736133.1 | lytic murein transglycosylase | - |
| XppCFBP412P_RS23050 () | 29732..30520 | - | 789 | Protein_26 | Tn3 family transposase TnpA_TnXax1 | Transposase |
| XppCFBP412P_RS23055 () | 31080..31457 | + | 378 | WP_039575730.1 | hypothetical protein | - |
| XppCFBP412P_RS23065 () | 31993..32181 | + | 189 | WP_039575724.1 | hypothetical protein | - |
| XppCFBP412P_RS23070 () | 32381..32980 | + | 600 | WP_039575722.1 | hypothetical protein | - |
| XppCFBP412P_RS23075 () | 33335..33808 | + | 474 | WP_039584270.1 | hypothetical protein | - |
| XppCFBP412P_RS23830 () | 33862..34005 | + | 144 | WP_157926380.1 | IS256 family transposase ISXax1 | Transposase |
| XppCFBP412P_RS23090 () | 35184..35708 | - | 525 | Protein_33 | Type IV secretion system protein virB1 | VF |
| XppCFBP412P_RS23095 () | 35782..36258 | - | 477 | WP_039575298.1 | hypothetical protein | - |
| XppCFBP412P_RS23100 () | 37810..38010 | + | 201 | WP_099800128.1 | hypothetical protein | - |
| XppCFBP412P_RS23105 () | 38023..39249 | - | 1227 | WP_011345585.1 | IS256 family transposase ISXax1 | Transposase |
| XppCFBP412P_RS23110 () | 39317..39865 | + | 549 | Protein_37 | IS256 family transposase ISXax1 | Transposase |
| XppCFBP412P_RS23120 () | 40337..40642 | + | 306 | WP_052761675.1 | hypothetical protein | - |
| XppCFBP412P_RS23135 () | 41843..42331 | + | 489 | Protein_40 | hypothetical protein | - |
| XppCFBP412P_RS23140 () | 42455..43549 | - | 1095 | WP_157926052.1 | restriction endonuclease | - |
| XppCFBP412P_RS23145 () | 43546..45357 | - | 1812 | WP_039572147.1 | Eco57I restriction-modification methylase domain-containing protein | - |
| XppCFBP412P_RS23150 () | 45333..45527 | - | 195 | WP_080948835.1 | ribbon-helix-helix domain-containing protein | - |
| XppCFBP412P_RS23165 () | 46184..46507 | + | 324 | WP_039572152.1 | hypothetical protein | - |
| XppCFBP412P_RS23175 () | 46911..47186 | + | 276 | WP_039572155.1 | hypothetical protein | - |
| XppCFBP412P_RS23835 () | 47207..47497 | + | 291 | WP_127446651.1 | hypothetical protein | - |
| XppCFBP412P_RS23180 () | 47853..48251 | + | 399 | WP_039572158.1 | hypothetical protein | - |
| XppCFBP412P_RS23840 () | 48324..48485 | + | 162 | WP_157926053.1 | hypothetical protein | - |
| XppCFBP412P_RS23185 () | 48482..48721 | + | 240 | WP_039572160.1 | hypothetical protein | - |
| XppCFBP412P_RS23190 () | 48735..49100 | + | 366 | Protein_50 | hypothetical protein | - |
| XppCFBP412P_RS23195 () | 49181..49735 | - | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| XppCFBP412P_RS23200 () | 49749..50165 | - | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| XppCFBP412P_RS23205 () | 50162..50416 | - | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| XppCFBP412P_RS23210 () | 50628..51221 | + | 594 | WP_022560487.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| XppCFBP412P_RS23215 () | 51218..54247 | + | 3030 | WP_022560486.1 | Tn3 family transposase ISPsy42 | Transposase |
| XppCFBP412P_RS23220 () | 54280..54510 | + | 231 | Protein_56 | hypothetical protein | - |
| XppCFBP412P_RS23225 () | 54608..54952 | + | 345 | WP_039572167.1 | hypothetical protein | - |
| XppCFBP412P_RS23230 () | 55064..55648 | + | 585 | WP_039572170.1 | hypothetical protein | - |
| XppCFBP412P_RS23235 () | 56002..56823 | + | 822 | WP_039572173.1 | hypothetical protein | - |
| XppCFBP412P_RS23845 () | 57431..57769 | - | 339 | WP_099859120.1 | hypothetical protein | - |
| XppCFBP412P_RS23240 () | 57841..58476 | + | 636 | WP_039572177.1 | AAA family ATPase | - |
| XppCFBP412P_RS23245 () | 58473..58808 | + | 336 | WP_039572180.1 | hypothetical protein | - |
| XppCFBP412P_RS23250 () | 59052..59516 | + | 465 | WP_022557748.1 | DUF2840 domain-containing protein | - |
| XppCFBP412P_RS23255 () | 59521..60117 | + | 597 | WP_080948837.1 | S26 family signal peptidase | - |
| XppCFBP412P_RS23260 () | 60110..60700 | + | 591 | WP_052756669.1 | Type IV secretion system protein virB1 | VF |
| XppCFBP412P_RS23265 () | 61293..63923 | + | 2631 | WP_039583566.1 | hypothetical protein | Relaxase |
| XppCFBP412P_RS24080 () | 64707..65979 | + | 1273 | Protein_67 | Conjugal transfer protein TraG | VF |
| XppCFBP412P_RS23275 () | 65976..66466 | + | 491 | Protein_68 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|