MGE detailed information
MGE type: Prophage MGE length: 79552 bp
Accession: NZ_CP020960 Location: 876882..956433 Organism: Staphylococcus aureus strain JK3137 Replicon: chromosome
Accession: NZ_CP020960 Location: 876882..956433 Organism: Staphylococcus aureus strain JK3137 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B9T46_RS04385 () | 871983..874784 | + | 2802 | WP_001056223.1 | MSCRAMM family adhesin clumping factor ClfA | - |
| B9T46_RS04390 () | 875005..876531 | + | 1527 | WP_000791729.1 | von Willebrand factor binding protein Vwb | - |
| B9T46_RS04395 () | 876882..877904 | + | 1023 | WP_000728056.1 | extracellular matrix protein-binding adhesin Emp | - |
| B9T46_RS04400 () | 878239..878709 | + | 471 | WP_000824472.1 | hypothetical protein | VF |
| B9T46_RS04405 () | 879050..879736 | + | 687 | WP_001548082.1 | thermonuclease family protein | - |
| B9T46_RS04410 () | 880093..880293 | + | 201 | WP_001059082.1 | cold-shock protein | - |
| B9T46_RS04415 () | 880789..881007 | - | 219 | WP_000005886.1 | hypothetical protein | - |
| B9T46_RS04420 () | 881069..881353 | - | 285 | WP_001004395.1 | hypothetical protein | - |
| B9T46_RS04425 () | 881441..882010 | - | 570 | WP_001106654.1 | hypothetical protein | - |
| B9T46_RS04430 () | 882198..882386 | - | 189 | WP_000052078.1 | hypothetical protein | Toxin Detail |
| B9T46_RS04435 () | 882415..882675 | - | 261 | WP_001059690.1 | hypothetical protein | Antitoxin Detail |
| B9T46_RS04440 () | 883016..883219 | + | 204 | WP_000145163.1 | sterile alpha motif-like domain-containing protein | - |
| B9T46_RS04445 () | 883216..883452 | - | 237 | WP_000368687.1 | hypothetical protein | - |
| B9T46_RS04450 () | 883677..884258 | + | 582 | WP_001140686.1 | phosphoglycerate mutase family protein | - |
| B9T46_RS04455 () | 884331..884948 | - | 618 | WP_000255561.1 | LysE/ArgO family amino acid transporter | - |
| B9T46_RS04460 () | 885103..885597 | - | 495 | WP_000569884.1 | GNAT family N-acetyltransferase | - |
| B9T46_RS04465 () | 885996..886418 | - | 423 | WP_000974460.1 | organic hydroperoxide resistance protein | - |
| B9T46_RS04470 () | 886566..887282 | + | 717 | WP_000150017.1 | type I 3-dehydroquinate dehydratase | - |
| B9T46_RS04475 () | 887365..887904 | + | 540 | WP_000422909.1 | nitroreductase | - |
| B9T46_RS04480 () | 888054..888374 | - | 321 | WP_001190695.1 | thioredoxin family protein | - |
| B9T46_RS04485 () | 888518..888874 | + | 357 | WP_000589549.1 | arsenate reductase family protein | - |
| B9T46_RS04490 () | 889032..889412 | + | 381 | WP_000290485.1 | glycine cleavage system protein GcvH | - |
| B9T46_RS04500 () | 889591..890469 | + | 879 | WP_000932219.1 | DUF1963 domain-containing protein | - |
| B9T46_RS04510 () | 891211..891597 | + | 387 | WP_001018962.1 | toprim domain-containing protein | - |
| B9T46_RS04515 () | 891590..891886 | + | 297 | WP_001065801.1 | thioredoxin family protein | - |
| B9T46_RS04520 () | 892136..893161 | + | 1026 | WP_000571218.1 | Methionine import ATP-binding protein MetN 2 | VF |
| B9T46_RS04525 () | 893154..893849 | + | 696 | WP_000520233.1 | ABC transporter permease | - |
| B9T46_RS04530 () | 893867..894688 | + | 822 | WP_000732326.1 | Methionine-binding lipoprotein MetQ | VF |
| B9T46_RS04535 () | 894831..896051 | - | 1221 | WP_000266158.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| B9T46_RS04540 () | 896139..896867 | - | 729 | WP_000734020.1 | Enterotoxin type A | VF |
| B9T46_RS04545 () | 896891..897619 | - | 729 | WP_001033321.1 | Enterotoxin type A | VF |
| B9T46_RS04550 () | 897636..898094 | - | 459 | WP_000281658.1 | ImmA/IrrE family metallo-endopeptidase | - |
| B9T46_RS04555 () | 898106..898438 | - | 333 | WP_001260004.1 | helix-turn-helix transcriptional regulator | - |
| B9T46_RS04560 () | 898631..898894 | + | 264 | WP_000243849.1 | helix-turn-helix domain-containing protein | - |
| B9T46_RS04565 () | 898887..899159 | + | 273 | WP_000091732.1 | helix-turn-helix domain-containing protein | - |
| B9T46_RS04570 () | 899171..899344 | + | 174 | WP_000784892.1 | hypothetical protein | - |
| B9T46_RS04575 () | 899311..899514 | + | 204 | WP_001231376.1 | hypothetical protein | - |
| B9T46_RS04580 () | 899516..899899 | + | 384 | WP_000403840.1 | hypothetical protein | - |
| B9T46_RS04585 () | 899900..900148 | + | 249 | WP_001103959.1 | DUF1474 family protein | - |
| B9T46_RS04590 () | 900240..902612 | + | 2373 | WP_000985235.1 | primase | - |
| B9T46_RS04595 () | 903283..903627 | + | 345 | WP_001081424.1 | hypothetical protein | - |
| B9T46_RS04600 () | 903852..904058 | + | 207 | WP_000884055.1 | hypothetical protein | - |
| B9T46_RS04605 () | 904045..905103 | + | 1059 | WP_000657538.1 | phage capsid protein | - |
| B9T46_RS04610 () | 905287..905778 | + | 492 | WP_000253084.1 | hypothetical protein | - |
| B9T46_RS04615 () | 905778..905930 | + | 153 | Protein_854 | terminase small subunit | - |
| B9T46_RS04625 () | 906207..907175 | + | 969 | WP_000801979.1 | Abi family protein | - |
| B9T46_RS04630 () | 907410..907964 | - | 555 | WP_001035618.1 | DUF4888 domain-containing protein | - |
| B9T46_RS04640 () | 908998..909192 | + | 195 | WP_000752917.1 | CsbD family protein | - |
| B9T46_RS04645 () | 909425..910276 | - | 852 | WP_001183858.1 | DUF368 domain-containing protein | - |
| B9T46_RS04650 () | 910604..911365 | + | 762 | WP_000168845.1 | Fe-S cluster assembly ATPase SufC | - |
| B9T46_RS04655 () | 911463..912770 | + | 1308 | WP_000205572.1 | Fe-S cluster assembly protein SufD | - |
| B9T46_RS04660 () | 912876..914126 | + | 1251 | WP_001006454.1 | cysteine desulfurase | - |
| B9T46_RS04665 () | 914116..914580 | + | 465 | WP_001010508.1 | SUF system NifU family Fe-S cluster assembly protein | - |
| B9T46_RS04670 () | 914731..916128 | + | 1398 | WP_001074405.1 | Fe-S cluster assembly protein SufB | - |
| B9T46_RS04675 () | 916196..917245 | - | 1050 | WP_001145730.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| B9T46_RS04680 () | 917307..917822 | - | 516 | WP_135197177.1 | hypothetical protein | - |
| B9T46_RS04685 () | 917826..918326 | - | 501 | WP_000896616.1 | hypothetical protein | - |
| B9T46_RS04690 () | 918377..919015 | - | 639 | WP_000874710.1 | XRE family transcriptional regulator | - |
| B9T46_RS04695 () | 919205..919459 | + | 255 | WP_031790429.1 | helix-turn-helix transcriptional regulator | - |
| B9T46_RS04700 () | 919475..919678 | + | 204 | WP_000394020.1 | hypothetical protein | - |
| B9T46_RS04705 () | 919866..920657 | + | 792 | WP_111762070.1 | phage antirepressor KilAC domain-containing protein | - |
| B9T46_RS04710 () | 920658..920882 | + | 225 | WP_000187184.1 | hypothetical protein | - |
| B9T46_RS04715 () | 920922..921371 | + | 450 | WP_025920885.1 | hypothetical protein | - |
| B9T46_RS04720 () | 921385..921606 | + | 222 | WP_000977381.1 | hypothetical protein | - |
| B9T46_RS04725 () | 921599..921760 | + | 162 | WP_000066011.1 | DUF1270 domain-containing protein | - |
| B9T46_RS04730 () | 921853..922155 | + | 303 | WP_029625611.1 | DUF2482 family protein | - |
| B9T46_RS04735 () | 922160..922420 | + | 261 | WP_135197178.1 | DUF1108 family protein | - |
| B9T46_RS04740 () | 922429..922692 | + | 264 | WP_001205732.1 | hypothetical protein | - |
| B9T46_RS04745 () | 922701..924644 | + | 1944 | WP_135197179.1 | AAA family ATPase | - |
| B9T46_RS04750 () | 924646..925566 | + | 921 | WP_000138475.1 | recombinase RecT | - |
| B9T46_RS04755 () | 925647..926264 | + | 618 | WP_071665632.1 | MBL fold metallo-hydrolase | - |
| B9T46_RS04760 () | 926265..926735 | + | 471 | WP_000934753.1 | single-stranded DNA-binding protein | - |
| B9T46_RS04765 () | 926765..927658 | + | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| B9T46_RS04770 () | 927665..927883 | + | 219 | WP_000338528.1 | hypothetical protein | - |
| B9T46_RS04775 () | 927892..928296 | + | 405 | WP_031905231.1 | RusA family crossover junction endodeoxyribonuclease | - |
| B9T46_RS04780 () | 928309..928677 | + | 369 | WP_000101288.1 | hypothetical protein | - |
| B9T46_RS04785 () | 928681..928923 | + | 243 | WP_000131383.1 | phi PVL orf 51-like protein | - |
| B9T46_RS04790 () | 928932..929303 | + | 372 | WP_001549172.1 | hypothetical protein | - |
| B9T46_RS04795 () | 929296..929532 | + | 237 | WP_001065101.1 | DUF1024 family protein | - |
| B9T46_RS04800 () | 929522..929764 | + | 243 | WP_000700108.1 | hypothetical protein | - |
| B9T46_RS04805 () | 929757..930290 | + | 534 | WP_000181819.1 | dUTP pyrophosphatase | - |
| B9T46_RS04810 () | 930327..930572 | + | 246 | WP_001282074.1 | hypothetical protein | - |
| B9T46_RS04815 () | 930569..930775 | + | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| B9T46_RS04820 () | 930772..931158 | + | 387 | WP_000592207.1 | hypothetical protein | - |
| B9T46_RS04825 () | 931155..931304 | + | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| B9T46_RS04830 () | 931304..931504 | + | 201 | WP_000265043.1 | DUF1514 family protein | - |
| B9T46_RS04835 () | 931532..931948 | + | 417 | WP_000590122.1 | hypothetical protein | - |
| B9T46_RS04840 () | 932180..932479 | + | 300 | WP_000988336.1 | HNH endonuclease | - |
| B9T46_RS04845 () | 932608..932952 | + | 345 | WP_000402904.1 | hypothetical protein | - |
| B9T46_RS04850 () | 932949..934610 | + | 1662 | WP_000625088.1 | terminase large subunit | - |
| B9T46_RS04855 () | 934626..935813 | + | 1188 | WP_000025274.1 | phage portal protein | - |
| B9T46_RS04860 () | 935797..936534 | + | 738 | WP_000642728.1 | Clp protease ClpP | - |
| B9T46_RS04865 () | 936558..937703 | + | 1146 | WP_000154559.1 | phage major capsid protein | - |
| B9T46_RS04870 () | 937723..938007 | + | 285 | WP_000238236.1 | hypothetical protein | - |
| B9T46_RS04875 () | 937997..938281 | + | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| B9T46_RS04880 () | 938265..938627 | + | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| B9T46_RS04885 () | 938624..939028 | + | 405 | WP_000114229.1 | HK97 gp10 family phage protein | - |
| B9T46_RS04890 () | 939025..939429 | + | 405 | WP_000565500.1 | hypothetical protein | - |
| B9T46_RS04895 () | 939433..940077 | + | 645 | WP_000260578.1 | phage tail protein | - |
| B9T46_RS04900 () | 940104..940343 | + | 240 | WP_094969769.1 | Ig-like domain-containing protein | - |
| B9T46_RS04905 () | 940393..940743 | + | 351 | WP_001096354.1 | hypothetical protein | - |
| B9T46_RS15775 () | 940794..940931 | + | 138 | WP_001549167.1 | hypothetical protein | - |
| B9T46_RS04910 () | 940988..945517 | + | 4530 | WP_001551779.1 | phage tail tape measure protein | - |
| B9T46_RS04915 () | 945514..946998 | + | 1485 | WP_000567394.1 | phage tail family protein | - |
| B9T46_RS04920 () | 947014..950799 | + | 3786 | WP_000582165.1 | hypothetical protein | - |
| B9T46_RS04925 () | 950789..950941 | + | 153 | WP_001153681.1 | hypothetical protein | - |
| B9T46_RS04930 () | 950988..951275 | + | 288 | WP_001040261.1 | hypothetical protein | - |
| B9T46_RS04935 () | 951333..951629 | + | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| B9T46_RS04940 () | 951779..951955 | + | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| - () | 951943..952117 | - | 175 | - | - | Antitoxin Detail |
| B9T46_RS04950 () | 952167..952421 | + | 255 | WP_000611512.1 | phage holin | - |
| B9T46_RS04955 () | 952433..953188 | + | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| B9T46_RS04960 () | 953379..953870 | + | 492 | WP_000919350.1 | Staphylokinase | VF |
| B9T46_RS04970 () | 954520..954855 | + | 336 | Protein_923 | SH3 domain-containing protein | - |
| B9T46_RS04975 () | 954950..955399 | - | 450 | WP_000727649.1 | Chemotaxis inhibitory protein | VF |
| B9T46_RS04980 () | 956083..956433 | + | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| B9T46_RS04985 () | 956486..956746 | - | 261 | WP_001791826.1 | hypothetical protein | - |
| B9T46_RS04995 () | 957057..957236 | - | 180 | WP_000669789.1 | hypothetical protein | - |
| B9T46_RS05000 () | 957558..957808 | - | 251 | Protein_928 | sphingomyelin phosphodiesterase | - |
| B9T46_RS15780 () | 958194..960247 | + | 2054 | Protein_929 | extracellular adherence protein Eap/Map | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|