MGE detailed information
MGE type: Prophage MGE length: 59722 bp
Accession: NZ_CP020957 Location: 2005109..2064830 Organism: Staphylococcus aureus strain C3948 Replicon: chromosome
Accession: NZ_CP020957 Location: 2005109..2064830 Organism: Staphylococcus aureus strain C3948 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B9T42_RS10320 () | 2000564..2001244 | - | 681 | WP_000645727.1 | phenol-soluble modulin export ABC transporter permease subunit PmtB | - |
| B9T42_RS10325 () | 2001245..2002141 | - | 897 | WP_000991302.1 | phenol-soluble modulin export ABC transporter ATP-binding protein PmtA | - |
| B9T42_RS10330 () | 2002138..2002518 | - | 381 | WP_000691584.1 | GntR family transcriptional regulator | - |
| B9T42_RS10335 () | 2002782..2002958 | - | 177 | WP_000681968.1 | hypothetical protein | - |
| B9T42_RS10340 () | 2003201..2003299 | - | 99 | WP_000990056.1 | hypothetical protein | - |
| B9T42_RS10345 () | 2003499..2004785 | + | 1287 | WP_001068542.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| B9T42_RS10350 () | 2005109..2005423 | - | 315 | Protein_1905 | hypothetical protein | VF |
| B9T42_RS10355 () | 2005410..2007164 | - | 1755 | WP_001549158.1 | hypothetical protein | VF |
| B9T42_RS10360 () | 2007551..2007801 | + | 251 | Protein_1907 | hypothetical protein | VF |
| B9T42_RS10365 () | 2008123..2008302 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| B9T42_RS10375 () | 2008613..2008873 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| B9T42_RS10380 () | 2008926..2009276 | - | 351 | WP_000702262.1 | hypothetical protein | VF |
| B9T42_RS10385 () | 2009957..2010406 | + | 450 | WP_000727651.1 | hypothetical protein | VF |
| B9T42_RS10390 () | 2010501..2010836 | - | 336 | Protein_1912 | SH3 domain-containing protein | - |
| B9T42_RS10400 () | 2011486..2011977 | - | 492 | WP_000919350.1 | hypothetical protein | VF |
| B9T42_RS10405 () | 2012168..2012923 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| B9T42_RS10410 () | 2012935..2013189 | - | 255 | WP_000611512.1 | phage holin | - |
| B9T42_RS10415 () | 2013241..2013348 | + | 108 | WP_001791821.1 | hypothetical protein | - |
| - () | 2013270..2013409 | + | 140 | NuclAT_0 | - | - |
| - () | 2013270..2013409 | + | 140 | NuclAT_0 | - | - |
| - () | 2013270..2013409 | + | 140 | NuclAT_0 | - | - |
| - () | 2013270..2013409 | + | 140 | NuclAT_0 | - | - |
| - () | 2013278..2013333 | + | 56 | - | - | Antitoxin Detail |
| B9T42_RS10420 () | 2013401..2013577 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| B9T42_RS10425 () | 2013727..2014023 | - | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| B9T42_RS10430 () | 2014081..2014368 | - | 288 | WP_001040261.1 | hypothetical protein | - |
| B9T42_RS10435 () | 2014415..2014567 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| B9T42_RS10440 () | 2014557..2018342 | - | 3786 | WP_129940477.1 | hypothetical protein | - |
| B9T42_RS10445 () | 2018358..2019842 | - | 1485 | WP_000567408.1 | phage tail family protein | - |
| B9T42_RS10450 () | 2019839..2024368 | - | 4530 | WP_129940479.1 | phage tail tape measure protein | - |
| B9T42_RS14630 () | 2024425..2024562 | - | 138 | WP_001549167.1 | hypothetical protein | - |
| B9T42_RS10455 () | 2024613..2024963 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| B9T42_RS10460 () | 2025013..2025237 | - | 225 | WP_072050172.1 | Ig-like domain-containing protein | - |
| B9T42_RS10465 () | 2025279..2025923 | - | 645 | WP_000268741.1 | phage tail protein | - |
| B9T42_RS10470 () | 2025924..2026331 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| B9T42_RS10475 () | 2026328..2026732 | - | 405 | WP_000114225.1 | HK97 gp10 family phage protein | - |
| B9T42_RS10480 () | 2026729..2027091 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| B9T42_RS10485 () | 2027075..2027359 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| B9T42_RS10490 () | 2027372..2027632 | - | 261 | WP_000238237.1 | hypothetical protein | - |
| B9T42_RS10495 () | 2027652..2028797 | - | 1146 | WP_000154555.1 | phage major capsid protein | - |
| B9T42_RS10500 () | 2028821..2029558 | - | 738 | WP_000861914.1 | Clp protease ClpP | - |
| B9T42_RS10505 () | 2029542..2030729 | - | 1188 | WP_000025274.1 | phage portal protein | - |
| B9T42_RS10510 () | 2030745..2032406 | - | 1662 | WP_000625088.1 | terminase large subunit | - |
| B9T42_RS10515 () | 2032403..2032747 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| B9T42_RS10520 () | 2032878..2033177 | - | 300 | WP_000988336.1 | HNH endonuclease | - |
| B9T42_RS10525 () | 2033409..2033825 | - | 417 | WP_000590126.1 | hypothetical protein | - |
| B9T42_RS10530 () | 2033853..2034053 | - | 201 | WP_000265039.1 | DUF1514 family protein | - |
| B9T42_RS10535 () | 2034053..2034202 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| B9T42_RS10540 () | 2034199..2034405 | - | 207 | WP_000195820.1 | DUF1381 domain-containing protein | - |
| B9T42_RS10545 () | 2034442..2034978 | - | 537 | WP_001066444.1 | dUTP diphosphatase | - |
| B9T42_RS10550 () | 2034971..2035204 | - | 234 | WP_042906988.1 | hypothetical protein | - |
| B9T42_RS10555 () | 2035376..2035459 | - | 84 | WP_078080889.1 | DUF1024 family protein | - |
| B9T42_RS10560 () | 2035452..2035862 | - | 411 | WP_000197968.1 | hypothetical protein | - |
| B9T42_RS10565 () | 2035859..2036368 | - | 510 | WP_001105598.1 | hypothetical protein | - |
| B9T42_RS10570 () | 2036365..2036814 | - | 450 | WP_000982711.1 | hypothetical protein | - |
| B9T42_RS10575 () | 2036879..2037121 | - | 243 | WP_000131366.1 | hypothetical protein | - |
| B9T42_RS10580 () | 2037125..2037493 | - | 369 | WP_000101274.1 | hypothetical protein | - |
| B9T42_RS10585 () | 2037506..2037910 | - | 405 | WP_000401964.1 | RusA family crossover junction endodeoxyribonuclease | - |
| B9T42_RS10590 () | 2037919..2038137 | - | 219 | WP_000338528.1 | hypothetical protein | - |
| B9T42_RS10595 () | 2038144..2039028 | - | 885 | WP_016047539.1 | DnaD domain protein | - |
| B9T42_RS10600 () | 2039058..2039528 | - | 471 | WP_024937184.1 | single-stranded DNA-binding protein | - |
| B9T42_RS10605 () | 2039529..2040146 | - | 618 | WP_078066178.1 | MBL fold metallo-hydrolase | - |
| B9T42_RS10610 () | 2040227..2041147 | - | 921 | WP_000138475.1 | recombinase RecT | - |
| B9T42_RS10615 () | 2041149..2043092 | - | 1944 | WP_031836069.1 | AAA family ATPase | - |
| B9T42_RS10620 () | 2043101..2043364 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| B9T42_RS10625 () | 2043373..2043633 | - | 261 | WP_000291489.1 | hypothetical protein ; Integrase | Integrase |
| B9T42_RS10630 () | 2043726..2043887 | - | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| B9T42_RS10635 () | 2043884..2044204 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| B9T42_RS10640 () | 2044263..2044895 | + | 633 | WP_000275058.1 | hypothetical protein | - |
| B9T42_RS10645 () | 2044910..2045050 | - | 141 | WP_000939496.1 | hypothetical protein | - |
| B9T42_RS10650 () | 2045081..2045275 | - | 195 | WP_000388066.1 | hypothetical protein | - |
| B9T42_RS10655 () | 2045292..2046044 | - | 753 | WP_001148618.1 | phage antirepressor KilAC domain-containing protein | - |
| B9T42_RS10660 () | 2046101..2046640 | + | 540 | WP_000351243.1 | hypothetical protein | - |
| B9T42_RS10665 () | 2046664..2046924 | - | 261 | WP_000435341.1 | transcriptional regulator | - |
| B9T42_RS10670 () | 2046937..2047176 | - | 240 | WP_000548578.1 | helix-turn-helix domain-containing protein | - |
| B9T42_RS10675 () | 2047367..2048074 | + | 708 | WP_000094093.1 | XRE family transcriptional regulator | - |
| B9T42_RS14635 () | 2048086..2048241 | + | 156 | WP_001049399.1 | hypothetical protein | - |
| B9T42_RS10680 () | 2048228..2048413 | + | 186 | WP_001089804.1 | hypothetical protein | - |
| B9T42_RS10685 () | 2048613..2048780 | + | 168 | WP_000705238.1 | hypothetical protein | - |
| B9T42_RS10690 () | 2048920..2049459 | + | 540 | WP_000391618.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| B9T42_RS10695 () | 2049632..2050669 | + | 1038 | WP_000857198.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| B9T42_RS10700 () | 2050720..2051550 | + | 831 | Protein_1975 | hypothetical protein | VF |
| B9T42_RS10705 () | 2051788..2052804 | - | 1017 | WP_000595324.1 | hypothetical protein | VF |
| B9T42_RS10710 () | 2052826..2053881 | - | 1056 | WP_000791407.1 | hypothetical protein | VF |
| B9T42_RS10715 () | 2054316..2055539 | + | 1224 | WP_000206638.1 | ArgE/DapE family deacylase | - |
| B9T42_RS10720 () | 2055911..2056756 | - | 846 | WP_000812008.1 | class I SAM-dependent methyltransferase | - |
| B9T42_RS10725 () | 2056818..2057729 | - | 912 | WP_000825510.1 | hypothetical protein | VF |
| B9T42_RS10730 () | 2057890..2059197 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| B9T42_RS10740 () | 2060050..2060493 | - | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| B9T42_RS10745 () | 2060658..2061035 | - | 378 | WP_129940481.1 | hypothetical protein | - |
| B9T42_RS10750 () | 2061353..2061943 | - | 591 | WP_001293058.1 | terminase small subunit | - |
| B9T42_RS10755 () | 2061940..2062152 | - | 213 | WP_000128898.1 | hypothetical protein | - |
| B9T42_RS10760 () | 2062213..2062759 | + | 547 | Protein_1986 | site-specific integrase | - |
| B9T42_RS10765 () | 2062854..2064470 | - | 1617 | WP_000240645.1 | 60 kDa chaperonin | VF |
| B9T42_RS10770 () | 2064546..2064830 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| B9T42_RS10775 () | 2065005..2065748 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
| B9T42_RS10780 () | 2065773..2067026 | - | 1254 | WP_000120307.1 | hypothetical protein | - |
| B9T42_RS10785 () | 2067223..2067849 | + | 627 | WP_000522384.1 | nitroreductase family protein | - |
| B9T42_RS10790 () | 2068210..2068995 | + | 786 | WP_000867960.1 | carbon-nitrogen family hydrolase | - |
| B9T42_RS10795 () | 2069592..2069726 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|