MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 215247 bp
Accession: NZ_CP020948        Location: 1..215247         Organism: Rhizobium sp. CIAT894       Replicon: plasmid pRheCIAT894a


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
RHEC894_RS21665 () 489..1082 + 594 WP_010062192.1 shikimate kinase -
RHEC894_RS21670 () 1268..1834 + 567 WP_085739086.1 UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase VF
RHEC894_RS21675 () 1957..3951 + 1995 WP_085739087.1 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase VF
RHEC894_RS21680 () 3980..5254 - 1275 WP_085739088.1 O-antigen ligase family protein -
RHEC894_RS32590 () 5337..5546 + 210 WP_125460988.1 hypothetical protein -
RHEC894_RS21685 () 5590..6309 + 720 WP_085739261.1 GntR family transcriptional regulator -
RHEC894_RS21690 () 6354..7541 + 1188 WP_085739089.1 mannonate dehydratase -
RHEC894_RS21695 () 7586..8233 - 648 WP_085739090.1 TetR/AcrR family transcriptional regulator -
RHEC894_RS21700 () 8369..9556 + 1188 WP_085739091.1 putative multidrug resistance protein EmrK VF
RHEC894_RS21705 () 9580..11175 + 1596 WP_085739092.1 DHA2 family efflux MFS transporter permease subunit -
RHEC894_RS21710 () 11235..12104 - 870 WP_085739093.1 aldose 1-epimerase family protein -
RHEC894_RS21715 () 12201..12530 - 330 WP_085739094.1 hypothetical protein -
RHEC894_RS21720 () 12675..14297 + 1623 WP_085739095.1 ATP-binding cassette domain-containing protein -
RHEC894_RS21725 () 14377..14964 + 588 WP_085739262.1 hypothetical protein -
RHEC894_RS21730 () 15060..15224 + 165 WP_085739096.1 DUF1328 domain-containing protein -
RHEC894_RS21735 () 15325..15681 - 357 WP_085739097.1 hypothetical protein -
RHEC894_RS21740 () 15700..15948 - 249 WP_085739098.1 hypothetical protein -
RHEC894_RS21750 () 16524..17045 + 522 WP_085739100.1 DUF992 domain-containing protein -
RHEC894_RS21755 () 17205..17461 + 257 Protein_18 GNAT family N-acetyltransferase -
RHEC894_RS21760 () 17587..18264 - 678 WP_085739101.1 DJ-1/PfpI family protein -
RHEC894_RS21765 () 18338..19303 + 966 WP_085739102.1 HTH-type transcriptional regulator CdhR VF
RHEC894_RS21770 () 19491..20363 - 873 WP_085739103.1 DMT family transporter -
RHEC894_RS21775 () 20422..21027 + 606 WP_085739104.1 TetR/AcrR family transcriptional regulator -
RHEC894_RS21780 () 21416..22306 - 891 WP_164517705.1 LysR family transcriptional regulator -
RHEC894_RS21785 () 22711..23889 + 1179 WP_085739106.1 MFS transporter -
RHEC894_RS21790 () 24025..24236 + 212 Protein_25 GNAT family N-acetyltransferase -
RHEC894_RS21795 () 24208..25137 - 930 WP_085739107.1 LysR family transcriptional regulator -
RHEC894_RS21800 () 25210..26127 + 918 WP_206427933.1 EamA family transporter -
RHEC894_RS21805 () 26338..29865 + 3528 WP_085739109.1 AAA family ATPase -
RHEC894_RS21810 () 29906..30166 + 261 WP_003595804.1 DUF4242 domain-containing protein -
RHEC894_RS21815 () 30385..31158 + 774 WP_004673604.1 DeoR/GlpR family DNA-binding transcription regulator -
RHEC894_RS21820 () 31269..32783 + 1515 WP_085739110.1 glycerol-3-phosphate dehydrogenase -
RHEC894_RS21825 () 32827..33903 + 1077 WP_085739111.1 sn-glycerol-3-phosphate import ATP-binding protein UgpC VF
RHEC894_RS21830 () 33913..34983 + 1071 WP_085739112.1 Trehalose import ATP-binding protein SugC VF
RHEC894_RS21835 () 34986..35852 + 867 WP_085739113.1 sugar ABC transporter permease -
RHEC894_RS21840 () 35854..36765 + 912 WP_085739114.1 carbohydrate ABC transporter permease -
RHEC894_RS21845 () 36765..37061 + 297 WP_064837492.1 DUF2160 domain-containing protein -
RHEC894_RS21850 () 37143..38867 + 1725 WP_085739115.1 ABC transporter substrate-binding protein -
RHEC894_RS21855 () 39018..40520 + 1503 WP_085739116.1 glycerol kinase GlpK -
RHEC894_RS21860 () 40543..41544 - 1002 WP_085739117.1 ABC transporter permease -
RHEC894_RS21865 () 41547..42566 - 1020 WP_085739118.1 ABC transporter permease -
RHEC894_RS21870 () 42556..44106 - 1551 WP_085739119.1 sugar ABC transporter ATP-binding protein -
RHEC894_RS21875 () 44168..45181 - 1014 WP_085739120.1 sugar ABC transporter substrate-binding protein -
RHEC894_RS21885 () 45749..46834 + 1086 WP_085739121.1 polysaccharide pyruvyl transferase family protein -
RHEC894_RS21890 () 46855..48381 + 1527 WP_085739122.1 lipopolysaccharide biosynthesis protein -
RHEC894_RS21895 () 48511..49602 + 1092 WP_085739123.1 hypothetical protein VF
RHEC894_RS21900 () 49625..50611 - 987 WP_085739263.1 D-threonate 4-phosphate dehydrogenase VF
RHEC894_RS21905 () 50642..51775 - 1134 WP_010069284.1 iron-containing alcohol dehydrogenase -
RHEC894_RS21910 () 52122..53309 - 1188 WP_085739124.1 exo-alpha-sialidase -
RHEC894_RS21915 () 53321..54223 - 903 WP_085739125.1 dihydrodipicolinate synthase family protein -
RHEC894_RS21920 () 54529..56166 + 1638 WP_085739126.1 ABC transporter substrate-binding protein -
RHEC894_RS21925 () 56297..57253 + 957 WP_085739127.1 ABC transporter permease -
RHEC894_RS21930 () 57256..58215 + 960 WP_085739128.1 ABC transporter permease -
RHEC894_RS21935 () 58212..59219 + 1008 WP_085739129.1 Oligopeptide transport ATP-binding protein OppD VF
RHEC894_RS21940 () 59216..60211 + 996 WP_206427934.1 Oligopeptide transport ATP-binding protein OppF VF
RHEC894_RS21945 () 60208..61269 + 1062 WP_085739131.1 hypothetical protein -
RHEC894_RS21950 () 61294..62058 + 765 WP_085739132.1 FadR family transcriptional regulator -
RHEC894_RS21955 () 62080..62379 - 300 WP_085739133.1 HigA family addiction module antidote protein -
RHEC894_RS21960 () 62406..62685 - 280 Protein_58 type II toxin-antitoxin system RelE/ParE family toxin -
RHEC894_RS21965 () 62755..63207 - 453 WP_085739134.1 DUF421 domain-containing protein -
RHEC894_RS21970 () 63218..64447 - 1230 WP_085739135.1 protein-L-isoaspartate(D-aspartate) O-methyltransferase -
RHEC894_RS21975 () 64788..65585 - 798 WP_085739136.1 response regulator transcription factor -
RHEC894_RS21990 () 66367..67455 - 1089 WP_085739138.1 hypothetical protein -
RHEC894_RS21995 () 67926..68495 + 570 WP_085739139.1 PE-PGRS family protein -
RHEC894_RS22000 () 68603..70318 + 1716 WP_085739140.1 type I secretion system permease/ATPase -
RHEC894_RS22005 () 70333..71778 + 1446 WP_085739141.1 HlyD family type I secretion periplasmic adaptor subunit -
RHEC894_RS22010 () 71786..72064 + 279 WP_010062560.1 IS3 family transposase ISGdi11 Transposase
RHEC894_RS22015 () 72270..72509 - 240 WP_206427935.1 hypothetical protein -
RHEC894_RS22020 () 72946..73563 + 618 WP_085739144.1 porin family protein -
RHEC894_RS22025 () 73804..74715 + 912 WP_085739145.1 acetamidase/formamidase family protein -
RHEC894_RS22035 () 74938..75476 + 539 Protein_70 IS1380 family transposase ISRsp7 Transposase
RHEC894_RS32595 () 75661..75768 - 108 Protein_71 transposase -
RHEC894_RS22040 () 75791..76226 + 436 Protein_72 IS630 family transposase ISBj5 Transposase
RHEC894_RS22045 () 76308..77186 - 879 WP_085739147.1 GalNAc(5)-diNAcBac-PP-undecaprenol beta-1,3-glucosyltransferase VF
RHEC894_RS22050 () 77232..77984 - 753 WP_085739148.1 class I SAM-dependent methyltransferase -
RHEC894_RS22055 () 77988..78431 - 444 WP_085739149.1 GNAT family N-acetyltransferase -
RHEC894_RS22060 () 78428..79399 - 972 WP_085739150.1 hypothetical protein -
RHEC894_RS22065 () 79396..80364 - 969 WP_085739151.1 exo-alpha-sialidase -
RHEC894_RS22070 () 80421..81125 - 705 WP_085739152.1 WbqC family protein -
RHEC894_RS22075 () 81137..82243 - 1107 WP_085739153.1 dTDP-4-amino-4,6-dideoxy-D-glucose transaminase VF
RHEC894_RS22080 () 82350..82982 + 633 Protein_80 hypothetical protein -
RHEC894_RS32600 () 83301..83411 + 111 Protein_81 acetamidase -
RHEC894_RS22085 () 83452..84354 - 903 WP_206427936.1 proline iminopeptidase-family hydrolase -
RHEC894_RS22090 () 84418..85215 - 798 WP_010066171.1 Transcriptional activator protein AnoR VF
RHEC894_RS22095 () 85344..86234 + 891 WP_085739155.1 proline iminopeptidase-family hydrolase -
RHEC894_RS22100 () 86286..87224 + 939 WP_085739156.1 ABC transporter permease -
RHEC894_RS22105 () 87221..88072 + 852 WP_085739157.1 ABC transporter permease -
RHEC894_RS22110 () 88069..89772 + 1704 WP_085739158.1 Glutathione import ATP-binding protein GsiA VF
RHEC894_RS22115 () 89792..91306 + 1515 WP_085739159.1 ABC transporter substrate-binding protein -
RHEC894_RS22120 () 91387..92262 - 876 WP_085739160.1 glutathione-dependent disulfide-bond oxidoreductase -
RHEC894_RS22125 () 92474..92722 + 249 WP_012559996.1 type II toxin-antitoxin system ParD family antitoxin Antitoxin Detail
RHEC894_RS22130 () 92719..93009 + 291 WP_010064973.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
RHEC894_RS22135 () 93157..94236 - 1080 WP_085739161.1 sn-glycerol-3-phosphate import ATP-binding protein UgpC VF
RHEC894_RS22140 () 94258..94638 - 381 WP_085739162.1 cupin domain-containing protein -
RHEC894_RS22145 () 94654..95745 - 1092 WP_085739163.1 Gfo/Idh/MocA family oxidoreductase -
RHEC894_RS22150 () 95748..96575 - 828 WP_085739164.1 carbohydrate ABC transporter permease -
RHEC894_RS22155 () 96572..97567 - 996 WP_085739165.1 sugar ABC transporter permease -
RHEC894_RS22160 () 97567..98820 - 1254 WP_085739166.1 extracellular solute-binding protein -
RHEC894_RS22165 () 98901..99554 - 654 WP_085739167.1 GntR family transcriptional regulator -
RHEC894_RS22170 () 99683..100894 + 1212 WP_085739168.1 Tm-1-like ATP-binding domain-containing protein -
RHEC894_RS22175 () 100891..101715 + 825 WP_085739169.1 phosphoenolpyruvate hydrolase family protein -
RHEC894_RS22180 () 101788..102639 - 852 WP_089152735.1 NAD(P)-dependent oxidoreductase -
RHEC894_RS22185 () 102853..103317 + 465 WP_085739171.1 universal stress protein -
RHEC894_RS22190 () 103411..104325 + 915 WP_085739172.1 J domain-containing protein -
RHEC894_RS22195 () 104328..104651 + 324 WP_085739173.1 transcriptional regulator -
RHEC894_RS22200 () 104802..104996 + 195 WP_085739264.1 periplasmic nitrate reductase, NapE protein -
RHEC894_RS22205 () 105000..105503 + 504 WP_085739174.1 ferredoxin-type protein NapF -
RHEC894_RS22210 () 105496..105780 + 285 WP_085739175.1 chaperone NapD -
RHEC894_RS22215 () 105755..108259 + 2505 WP_085739176.1 periplasmic nitrate reductase subunit alpha -
RHEC894_RS22220 () 108229..108729 + 501 WP_085739177.1 nitrate reductase cytochrome c-type subunit -
RHEC894_RS22225 () 108735..109445 + 711 WP_164517706.1 NapC/NirT family cytochrome c -
RHEC894_RS22230 () 109473..110402 - 930 WP_085739178.1 Phosphatidate cytidylyltransferase VF
RHEC894_RS22235 () 110399..111019 - 621 WP_085739179.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
RHEC894_RS32605 () 111064..111153 - 90 Protein_113 CDP-alcohol phosphatidyltransferase family protein -
RHEC894_RS22240 () 111390..112376 + 987 WP_085739180.1 BMP family protein -
RHEC894_RS22245 () 112384..113796 + 1413 WP_085739181.1 amidase -
RHEC894_RS22250 () 113793..115325 + 1533 WP_085739266.1 Xylose import ATP-binding protein XylG VF
RHEC894_RS22255 () 115315..116364 + 1050 WP_085739182.1 ABC transporter permease -
RHEC894_RS22260 () 116361..117305 + 945 WP_085739183.1 ABC transporter permease -
RHEC894_RS22265 () 117332..118621 + 1290 WP_085739184.1 amidohydrolase family protein -
RHEC894_RS22270 () 118646..119425 - 780 WP_085739185.1 class I SAM-dependent methyltransferase -
RHEC894_RS22275 () 119574..120440 + 867 WP_085739186.1 alpha/beta fold hydrolase -
RHEC894_RS22280 () 120510..121019 - 510 WP_085739187.1 Peptide methionine sulfoxide reductase MsrA 3 VF
RHEC894_RS22285 () 121206..122351 + 1146 WP_085739188.1 extracellular solute-binding protein -
RHEC894_RS22290 () 122351..123241 + 891 WP_085739189.1 ABC transporter permease subunit -
RHEC894_RS22295 () 123238..124065 + 828 WP_085739190.1 ABC transporter permease subunit -
RHEC894_RS22300 () 124100..125179 + 1080 WP_085739191.1 Sulfate/thiosulfate import ATP-binding protein CysA VF
RHEC894_RS22305 () 125185..126018 - 834 WP_085739192.1 inositol monophosphatase -
RHEC894_RS22310 () 126124..127200 - 1077 WP_085739193.1 Trehalose import ATP-binding protein SugC VF
RHEC894_RS22315 () 127262..128149 - 888 WP_085739194.1 carbohydrate ABC transporter permease -
RHEC894_RS22320 () 128153..129061 - 909 WP_085739195.1 sugar ABC transporter permease -
RHEC894_RS22325 () 129128..130390 - 1263 WP_085739196.1 extracellular solute-binding protein -
RHEC894_RS22330 () 130494..131393 - 900 WP_085739267.1 sugar phosphate isomerase/epimerase -
RHEC894_RS22335 () 131404..132438 - 1035 WP_085739197.1 Gfo/Idh/MocA family oxidoreductase -
RHEC894_RS22340 () 132573..133637 + 1065 WP_010069586.1 substrate-binding domain-containing protein -
RHEC894_RS22345 () 133644..134981 - 1338 WP_085739198.1 LLM class flavin-dependent oxidoreductase -
RHEC894_RS22350 () 135287..136504 + 1218 WP_085739199.1 SfnB family sulfur acquisition oxidoreductase -
RHEC894_RS22355 () 136770..137978 - 1209 WP_085739200.1 acyl-CoA dehydrogenase family protein -
RHEC894_RS22360 () 138056..139102 - 1047 WP_085739201.1 substrate-binding domain-containing protein -
RHEC894_RS22365 () 139338..140822 + 1485 WP_085739202.1 Arabinose import ATP-binding protein AraG VF
RHEC894_RS22370 () 140819..141880 + 1062 WP_085739203.1 ABC transporter permease -
RHEC894_RS22375 () 141899..143296 + 1398 WP_010067452.1 LLM class flavin-dependent oxidoreductase -
RHEC894_RS22380 () 143420..145030 + 1611 WP_085739204.1 ABC transporter substrate-binding protein -
RHEC894_RS22385 () 145071..146060 + 990 WP_085739205.1 ABC transporter permease -
RHEC894_RS22390 () 146057..146890 + 834 WP_085739206.1 ABC transporter permease -
RHEC894_RS22395 () 146887..147678 + 792 WP_085739207.1 Oligopeptide transport ATP-binding protein OppD VF
RHEC894_RS22400 () 147675..148454 + 780 WP_085739208.1 Glutathione import ATP-binding protein GsiA VF
RHEC894_RS22405 () 148466..149560 + 1095 WP_085739209.1 alanine--glyoxylate aminotransferase family protein -
RHEC894_RS22410 () 149630..150493 + 864 WP_085739210.1 glycerophosphodiester phosphodiesterase -
RHEC894_RS22415 () 150651..152291 + 1641 WP_206427932.1 diguanylate cyclase -
RHEC894_RS22420 () 152346..153155 - 810 WP_085739212.1 inositol monophosphatase -
RHEC894_RS22425 () 153155..154159 - 1005 WP_085739213.1 LacI family DNA-binding transcriptional regulator -
RHEC894_RS22430 () 154143..154922 - 780 WP_085739214.1 glycerophosphodiester phosphodiesterase -
RHEC894_RS22435 () 154922..155977 - 1056 WP_085739215.1 Maltose/maltodextrin import ATP-binding protein MalK VF
RHEC894_RS22440 () 155977..156819 - 843 WP_085739216.1 Trehalose transport system permease protein SugB VF
RHEC894_RS22445 () 156822..158123 - 1302 WP_085739217.1 sugar ABC transporter permease -
RHEC894_RS22450 () 158182..159528 - 1347 WP_085739218.1 extracellular solute-binding protein -
RHEC894_RS22455 () 160532..160990 + 459 WP_085739219.1 YbaK/EbsC family protein -
RHEC894_RS22460 () 161088..162095 + 1008 WP_085739220.1 Tim44 domain-containing protein -
RHEC894_RS22465 () 162221..163252 - 1032 WP_085739221.1 hydroxyacid dehydrogenase -
RHEC894_RS22470 () 163551..164150 + 600 WP_085739222.1 HupE/UreJ family protein -
RHEC894_RS22475 () 164440..165018 + 579 WP_085739223.1 GbsR/MarR family transcriptional regulator -
RHEC894_RS22480 () 165023..166753 + 1731 WP_085739224.1 thiol reductant ABC exporter subunit CydD -
RHEC894_RS22485 () 166750..168441 + 1692 WP_085739225.1 putative ABC transporter ATP-binding protein VF
RHEC894_RS22490 () 168518..170086 + 1569 WP_085739226.1 cytochrome ubiquinol oxidase subunit I -
RHEC894_RS22495 () 170093..171247 + 1155 WP_085739227.1 cytochrome d ubiquinol oxidase subunit II -
RHEC894_RS22500 () 171261..171383 + 123 WP_085739228.1 cytochrome bd-I oxidase subunit CydX -
RHEC894_RS22505 () 171911..172987 + 1077 WP_010069694.1 ISAs1 family transposase ISRm21 Transposase
RHEC894_RS22510 () 173014..173907 - 894 WP_085739229.1 NAD(P)/FAD-dependent oxidoreductase -
RHEC894_RS22515 () 174111..174758 + 648 WP_085739230.1 HTH-type transcriptional regulator SrpR VF
RHEC894_RS22520 () 174793..175656 + 864 WP_085739231.1 class I SAM-dependent methyltransferase -
RHEC894_RS22525 () 175938..177941 - 2004 WP_085739232.1 aldo/keto reductase -
RHEC894_RS22530 () 178091..179173 - 1083 WP_085739233.1 Maltose/maltodextrin import ATP-binding protein MalK VF
RHEC894_RS22535 () 179187..180023 - 837 WP_085739234.1 carbohydrate ABC transporter permease -
RHEC894_RS22540 () 180020..180880 - 861 WP_085739235.1 sugar ABC transporter permease -
RHEC894_RS22545 () 180940..182214 - 1275 WP_085739236.1 extracellular solute-binding protein -
RHEC894_RS22550 () 182301..183221 + 921 WP_085739237.1 helix-turn-helix domain-containing protein -
RHEC894_RS22555 () 183600..184673 + 1074 WP_085739238.1 putative urea ABC transporter substrate-binding protein -
RHEC894_RS22560 () 184736..185554 + 819 WP_085739239.1 ABC transporter permease -
RHEC894_RS22565 () 185551..186381 + 831 WP_085739240.1 Bicarbonate transport ATP-binding protein CmpD VF
RHEC894_RS22570 () 186378..187199 + 822 WP_085739241.1 urea carboxylase-associated family protein -
RHEC894_RS22575 () 187212..187862 + 651 WP_085739268.1 urea carboxylase-associated family protein -
RHEC894_RS22580 () 187866..191405 + 3540 WP_085739242.1 urea carboxylase -
RHEC894_RS22585 () 191408..193213 + 1806 WP_085739269.1 allophanate hydrolase -
RHEC894_RS22590 () 193429..193824 - 396 WP_085739243.1 VOC family protein -
RHEC894_RS22595 () 193842..194936 - 1095 WP_085739244.1 Gfo/Idh/MocA family oxidoreductase -
RHEC894_RS22600 () 194947..195957 - 1011 WP_085739245.1 Gfo/Idh/MocA family oxidoreductase -
RHEC894_RS22605 () 196317..197477 + 1161 WP_085739246.1 fumarylacetoacetate hydrolase family protein -
RHEC894_RS22610 () 197553..197801 - 249 Protein_188 Tn3 family transposase -
RHEC894_RS22615 () 197915..198310 - 396 WP_085739247.1 VOC family protein -
RHEC894_RS22620 () 198371..198794 - 424 Protein_190 Tautomerase enzyme -
RHEC894_RS22625 () 198912..199511 + 600 WP_085739248.1 TetR/AcrR family transcriptional regulator -
RHEC894_RS22630 () 199604..201742 - 2139 WP_085739270.1 methylmalonyl-CoA mutase -
RHEC894_RS22635 () 201838..203196 + 1359 WP_085739249.1 LLM class flavin-dependent oxidoreductase -
RHEC894_RS22640 () 203198..203851 - 654 WP_085739250.1 ABC transporter permease -
RHEC894_RS22645 () 203832..204920 - 1089 WP_085739251.1 Methionine import ATP-binding protein MetN VF
RHEC894_RS22650 () 205011..205850 - 840 WP_085739252.1 D-methionine-binding lipoprotein MetQ VF
RHEC894_RS22655 () 206096..206656 - 561 WP_085739253.1 FMN reductase -
RHEC894_RS22660 () 206815..208017 - 1203 WP_085739254.1 MFS transporter -
RHEC894_RS22665 () 208377..208835 + 459 WP_085739255.1 helix-turn-helix domain-containing protein -
RHEC894_RS22670 () 208862..210814 + 1953 WP_085739256.1 SARP family transcriptional regulator -
RHEC894_RS22675 () 210946..211185 + 240 WP_085739257.1 hypothetical protein -
RHEC894_RS22680 () 211496..212710 + 1215 WP_085739258.1 Sporulation initiation inhibitor protein Soj VF
RHEC894_RS22685 () 212753..213805 + 1053 WP_085739259.1 plasmid partitioning protein RepB -
RHEC894_RS22690 () 213955..215247 + 1293 WP_085739260.1 replication initiation protein RepC -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance