MGE detailed information
MGE type: Genomic_island MGE length: 25926 bp
Accession: NZ_CP020933 Location: 1679578..1705503 Organism: Escherichia coli strain HB-Coli0 Replicon: chromosome
Accession: NZ_CP020933 Location: 1679578..1705503 Organism: Escherichia coli strain HB-Coli0 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B9W17_RS08230 () | 1674899..1676347 | - | 1449 | WP_063112771.1 | NADP-dependent succinate-semialdehyde dehydrogenase | - |
| B9W17_RS08235 () | 1676370..1677638 | - | 1269 | WP_001472082.1 | L-2-hydroxyglutarate oxidase | - |
| B9W17_RS08240 () | 1677658..1678635 | - | 978 | WP_000993087.1 | carbon starvation induced protein CsiD | - |
| B9W17_RS25335 () | 1678971..1681224 | - | 2254 | Protein_1562 | alpha-amylase family protein | - |
| B9W17_RS08265 () | 1681959..1682804 | - | 846 | WP_001280427.1 | DUF4942 domain-containing protein | - |
| B9W17_RS08270 () | 1682889..1683086 | - | 198 | WP_000445281.1 | DUF957 domain-containing protein | - |
| B9W17_RS08275 () | 1683106..1683594 | - | 489 | WP_000761669.1 | hypothetical protein | - |
| B9W17_RS08280 () | 1683591..1683968 | - | 378 | WP_001094443.1 | TA system toxin CbtA family protein | Toxin Detail |
| B9W17_RS08285 () | 1684058..1684426 | - | 369 | WP_085704244.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| B9W17_RS08290 () | 1684500..1684721 | - | 222 | WP_000692176.1 | DUF987 domain-containing protein | - |
| B9W17_RS08295 () | 1684808..1685284 | - | 477 | WP_001360063.1 | RadC family protein | - |
| B9W17_RS08300 () | 1685300..1685785 | - | 486 | WP_000206656.1 | antirestriction protein | - |
| B9W17_RS08305 () | 1685877..1686695 | - | 819 | WP_021520251.1 | DUF945 domain-containing protein | - |
| B9W17_RS08315 () | 1687022..1689868 | - | 2847 | WP_085704030.1 | Ag43/Cah family autotransporter adhesin | - |
| B9W17_RS08320 () | 1690239..1691111 | - | 873 | WP_085704033.1 | GTPase family protein | - |
| B9W17_RS08330 () | 1692392..1693093 | - | 702 | WP_000466881.1 | hypothetical protein | - |
| B9W17_RS08340 () | 1693438..1693869 | - | 432 | WP_137511850.1 | inovirus-type Gp2 protein | - |
| B9W17_RS08345 () | 1694032..1694646 | - | 615 | WP_000628304.1 | inovirus Gp2 family protein | - |
| B9W17_RS08350 () | 1695035..1695535 | - | 501 | WP_001372617.1 | hypothetical protein | - |
| B9W17_RS08355 () | 1695817..1696563 | - | 747 | WP_024188243.1 | hypothetical protein | - |
| B9W17_RS08360 () | 1696626..1696853 | - | 228 | WP_000265818.1 | AlpA family phage regulatory protein | - |
| B9W17_RS08365 () | 1697633..1699237 | + | 1605 | WP_021520269.1 | hypothetical protein | - |
| B9W17_RS08370 () | 1699320..1699916 | - | 597 | WP_000268404.1 | hypothetical protein | - |
| B9W17_RS08375 () | 1700046..1701362 | - | 1317 | WP_021520270.1 | Prophage integrase IntA ; Integrase | Integrase |
| B9W17_RS08380 () | 1701557..1701841 | + | 285 | WP_001347906.1 | hypothetical protein | - |
| B9W17_RS08385 () | 1702355..1703727 | + | 1373 | Protein_1585 | DUF5507 domain-containing protein | - |
| B9W17_RS08390 () | 1704113..1704370 | + | 258 | WP_000340075.1 | hypothetical protein | - |
| B9W17_RS25145 () | 1704456..1704575 | + | 120 | WP_000927517.1 | hypothetical protein | - |
| B9W17_RS08400 () | 1704640..1707900 | + | 3261 | Protein_1588 | AIDA repeat-containing protein | - |
| B9W17_RS08410 () | 1708638..1709120 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| B9W17_RS08415 () | 1709291..1709728 | + | 438 | WP_001341638.1 | type II toxin-antitoxin system toxin RatA | - |
| B9W17_RS08420 () | 1709718..1710008 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| B9W17_RS08425 () | 1710070..1710411 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|