MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 45544 bp
Accession: NZ_CP020872 Location: 1868996..1914539 Organism: Dickeya fangzhongdai strain PA1 Replicon: chromosome
Accession: NZ_CP020872 Location: 1868996..1914539 Organism: Dickeya fangzhongdai strain PA1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B6N31_RS08275 () | 1864669..1865760 | - | 1092 | WP_121480004.1 | alpha/beta hydrolase | - |
| B6N31_RS08280 () | 1865842..1866990 | - | 1149 | WP_121480005.1 | iron-containing alcohol dehydrogenase | - |
| B6N31_RS08285 () | 1867284..1868294 | + | 1011 | WP_205571541.1 | AraC family transcriptional regulator | - |
| B6N31_RS08290 () | 1868344..1868769 | + | 426 | WP_049855231.1 | hypothetical protein | - |
| B6N31_RS08300 () | 1869331..1871064 | - | 1734 | WP_121480006.1 | ATP-binding protein | - |
| B6N31_RS08305 () | 1871074..1872087 | - | 1014 | WP_121480007.1 | SIR2 family protein | - |
| B6N31_RS08310 () | 1872301..1872930 | - | 630 | WP_162942922.1 | hypothetical protein | - |
| B6N31_RS08315 () | 1873472..1874419 | + | 948 | WP_121480009.1 | DUF1738 domain-containing protein | - |
| B6N31_RS08320 () | 1874747..1874983 | + | 237 | WP_121480010.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| B6N31_RS08325 () | 1874986..1875300 | + | 315 | WP_121480011.1 | CcdB family protein | Toxin Detail |
| B6N31_RS08335 () | 1875804..1876400 | + | 597 | WP_036112524.1 | hypothetical protein | - |
| B6N31_RS08340 () | 1876550..1877296 | - | 747 | WP_121480012.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| B6N31_RS08345 () | 1877305..1879167 | - | 1863 | WP_121480013.1 | type IV secretion system DNA-binding domain-containing protein | - |
| B6N31_RS08355 () | 1879863..1880165 | - | 303 | WP_038908373.1 | conjugal transfer protein | - |
| B6N31_RS08360 () | 1880206..1881222 | - | 1017 | WP_121480015.1 | hypothetical protein | VF |
| B6N31_RS08365 () | 1881212..1882420 | - | 1209 | WP_121480016.1 | TrbI/VirB10 family protein | - |
| B6N31_RS08370 () | 1882417..1883310 | - | 894 | WP_205571542.1 | P-type conjugative transfer protein VirB9 | - |
| B6N31_RS08375 () | 1883307..1883990 | - | 684 | WP_121480018.1 | hypothetical protein | VF |
| B6N31_RS22160 () | 1883983..1884123 | - | 141 | WP_162942923.1 | hypothetical protein | - |
| B6N31_RS08380 () | 1884211..1885239 | - | 1029 | WP_121480019.1 | type IV secretion system protein | - |
| B6N31_RS08385 () | 1885315..1885590 | - | 276 | WP_121480020.1 | EexN family lipoprotein | - |
| B6N31_RS08390 () | 1885601..1886320 | - | 720 | WP_121480021.1 | type IV secretion system protein | - |
| B6N31_RS08395 () | 1886345..1889092 | - | 2748 | WP_121480022.1 | hypothetical protein | VF |
| B6N31_RS08400 () | 1889102..1889377 | - | 276 | WP_033581363.1 | hypothetical protein | VF |
| B6N31_RS08405 () | 1889397..1890044 | - | 648 | WP_121480023.1 | hypothetical protein | VF |
| B6N31_RS08410 () | 1890115..1890348 | - | 234 | WP_121480024.1 | hypothetical protein | - |
| B6N31_RS08415 () | 1891239..1894019 | + | 2781 | WP_121480025.1 | class I SAM-dependent DNA methyltransferase | - |
| B6N31_RS08420 () | 1894016..1896061 | + | 2046 | WP_121480026.1 | DEAD/DEAH box helicase | - |
| B6N31_RS08425 () | 1896054..1897232 | + | 1179 | WP_121480027.1 | GIY-YIG nuclease family protein | - |
| B6N31_RS08430 () | 1897333..1897896 | + | 564 | Protein_1620 | IS110 family transposase | - |
| B6N31_RS08435 () | 1898001..1898930 | - | 930 | WP_121480028.1 | hypothetical protein | - |
| B6N31_RS08445 () | 1899454..1899663 | - | 210 | WP_121480029.1 | TraR/DksA family transcriptional regulator | - |
| B6N31_RS08450 () | 1899653..1900237 | - | 585 | WP_121480030.1 | DUF2857 domain-containing protein | - |
| B6N31_RS08455 () | 1900254..1900448 | - | 195 | WP_012884167.1 | AlpA family transcriptional regulator | - |
| B6N31_RS08460 () | 1901106..1901363 | - | 258 | WP_012769229.1 | helix-turn-helix domain-containing protein | - |
| B6N31_RS08465 () | 1901477..1901755 | - | 279 | WP_121480031.1 | hypothetical protein | VF |
| B6N31_RS08470 () | 1901888..1902175 | + | 288 | WP_042857867.1 | helix-turn-helix domain-containing protein | - |
| B6N31_RS08475 () | 1902873..1903391 | + | 519 | WP_022633128.1 | hypothetical protein | VF |
| B6N31_RS08480 () | 1903506..1905359 | + | 1854 | WP_121480032.1 | hypothetical protein | VF |
| B6N31_RS08485 () | 1905374..1905781 | + | 408 | WP_121480033.1 | DUF1795 domain-containing protein | - |
| B6N31_RS08490 () | 1905793..1909707 | + | 3915 | Protein_1631 | PAAR domain-containing protein | - |
| B6N31_RS08495 () | 1910065..1910415 | + | 351 | WP_121480034.1 | hypothetical protein | - |
| B6N31_RS08500 () | 1910663..1911589 | - | 927 | WP_121480035.1 | hypothetical protein | - |
| B6N31_RS08510 () | 1912612..1912923 | + | 312 | WP_121480037.1 | DUF736 domain-containing protein | - |
| B6N31_RS08515 () | 1913078..1914361 | - | 1284 | WP_121480038.1 | hypothetical protein ; Integrase | Integrase |
| B6N31_RS08525 () | 1914709..1915500 | - | 792 | WP_107759121.1 | DgsA anti-repressor MtfA | - |
| B6N31_RS08535 () | 1916086..1916433 | + | 348 | WP_121480039.1 | DUF3168 domain-containing protein | - |
| B6N31_RS08540 () | 1916538..1918616 | + | 2079 | WP_107759123.1 | discoidin domain-containing protein | - |
| B6N31_RS08545 () | 1918773..1918940 | + | 168 | WP_038918679.1 | YqaE/Pmp3 family membrane protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|