MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 16043 bp
Accession: NZ_CP020872 Location: 1016659..1032701 Organism: Dickeya fangzhongdai strain PA1 Replicon: chromosome
Accession: NZ_CP020872 Location: 1016659..1032701 Organism: Dickeya fangzhongdai strain PA1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B6N31_RS04570 () | 1012734..1013540 | + | 807 | WP_121479760.1 | oxidoreductase | - |
| B6N31_RS04575 () | 1013779..1014146 | + | 368 | Protein_878 | GNAT family N-acetyltransferase | - |
| B6N31_RS04580 () | 1014384..1015526 | + | 1143 | WP_038918034.1 | Fic family protein | - |
| B6N31_RS22115 () | 1015549..1015659 | - | 111 | Protein_880 | IS3 family transposase | - |
| B6N31_RS04585 () | 1015749..1015991 | + | 243 | WP_071605161.1 | helix-turn-helix domain-containing protein | - |
| B6N31_RS04590 () | 1016317..1016541 | + | 225 | WP_038918035.1 | DUF1778 domain-containing protein | - |
| B6N31_RS04595 () | 1016659..1017783 | + | 1125 | WP_038918036.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| B6N31_RS04600 () | 1018035..1019930 | + | 1896 | WP_038918037.1 | N-6 DNA methylase | - |
| B6N31_RS04605 () | 1019917..1020879 | + | 963 | WP_071605162.1 | restriction endonuclease subunit S | - |
| B6N31_RS04615 () | 1021583..1022152 | - | 570 | WP_038918038.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| B6N31_RS22120 () | 1022118..1022330 | - | 213 | WP_023638430.1 | hypothetical protein | - |
| B6N31_RS04620 () | 1022375..1025029 | + | 2655 | WP_205571548.1 | N-6 DNA methylase | - |
| B6N31_RS04625 () | 1025022..1027031 | + | 2010 | WP_193745938.1 | ATP-dependent helicase | - |
| B6N31_RS04630 () | 1027033..1028298 | + | 1266 | WP_038918041.1 | GIY-YIG nuclease family protein | - |
| B6N31_RS04635 () | 1028409..1028714 | - | 306 | WP_038918043.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| B6N31_RS04640 () | 1028717..1028935 | - | 219 | WP_038918044.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| B6N31_RS04645 () | 1028994..1029737 | - | 744 | WP_038918045.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| B6N31_RS04655 () | 1030641..1030982 | - | 342 | WP_121479762.1 | hypothetical protein | - |
| B6N31_RS04660 () | 1031439..1032701 | - | 1263 | WP_038918047.1 | hypothetical protein ; Integrase | Integrase |
| B6N31_RS04670 () | 1033603..1035756 | + | 2154 | WP_038918048.1 | ornithine decarboxylase | - |
| B6N31_RS04675 () | 1035826..1037283 | - | 1458 | WP_038918049.1 | L-asparagine permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|