MGE detailed information
MGE type: IScluster/Tn MGE length: 3653 bp
Accession: NZ_CP020871 Location: 18192..21844 Organism: Xylella fastidiosa subsp. pauca strain De Donno Replicon: plasmid pXF-De_Donno
Accession: NZ_CP020871 Location: 18192..21844 Organism: Xylella fastidiosa subsp. pauca strain De Donno Replicon: plasmid pXF-De_Donno
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B9J09_RS11980 () | 13522..13884 | + | 363 | WP_046417499.1 | hypothetical protein | - |
| B9J09_RS11985 () | 13890..18005 | + | 4116 | WP_046417500.1 | DUF1738 domain-containing protein | - |
| B9J09_RS11990 () | 18192..18749 | - | 558 | WP_046417502.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| B9J09_RS11995 () | 18837..19124 | - | 288 | WP_004085905.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| B9J09_RS12000 () | 19117..19359 | - | 243 | WP_004085758.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| B9J09_RS12005 () | 19777..20097 | + | 321 | WP_046417511.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| B9J09_RS12010 () | 20227..20553 | + | 327 | WP_004091396.1 | DNA-binding protein | - |
| B9J09_RS12510 () | 20928..21101 | - | 174 | WP_155641416.1 | hypothetical protein | - |
| B9J09_RS12015 () | 21103..21375 | - | 273 | WP_046417513.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| B9J09_RS12020 () | 21347..21844 | + | 498 | Protein_23 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| B9J09_RS12025 () | 21875..22456 | - | 582 | Protein_24 | conjugal transfer protein TrbN | - |
| B9J09_RS12030 () | 22462..23859 | - | 1398 | WP_046417516.1 | P-type conjugative transfer protein TrbL | - |
| B9J09_RS12515 () | 23865..24179 | - | 315 | WP_155561293.1 | EexN family lipoprotein | - |
| B9J09_RS12040 () | 24192..24977 | - | 786 | WP_046417519.1 | P-type conjugative transfer protein TrbJ | - |
| B9J09_RS12045 () | 24996..26396 | - | 1401 | WP_046417521.1 | TrbI/VirB10 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|