MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 100161 bp
Accession: NZ_CP020870 Location: 1358970..1459130 Organism: Xylella fastidiosa subsp. pauca strain De Donno Replicon: chromosome
Accession: NZ_CP020870 Location: 1358970..1459130 Organism: Xylella fastidiosa subsp. pauca strain De Donno Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B9J09_RS06710 () | 1355042..1355851 | + | 810 | WP_046419714.1 | DUF481 domain-containing protein | - |
| B9J09_RS06715 () | 1355905..1356822 | - | 918 | WP_046419711.1 | hydroxymethylbilane synthase | - |
| B9J09_RS06720 () | 1356839..1357597 | - | 759 | WP_010894122.1 | LytTR family DNA-binding domain-containing protein | - |
| B9J09_RS06725 () | 1357623..1358621 | - | 999 | WP_004084959.1 | sensor histidine kinase | - |
| B9J09_RS06730 () | 1358677..1359351 | - | 675 | WP_046419709.1 | alpha/beta hydrolase | - |
| B9J09_RS06735 () | 1359380..1361284 | - | 1905 | WP_046419909.1 | glucans biosynthesis glucosyltransferase MdoH | - |
| B9J09_RS06740 () | 1362778..1364145 | + | 1368 | WP_046419706.1 | serine hydrolase | - |
| B9J09_RS06745 () | 1364265..1365119 | - | 855 | WP_046419704.1 | hypothetical protein | - |
| B9J09_RS06750 () | 1366379..1367308 | + | 930 | WP_010894113.1 | ArsR family transcriptional regulator | - |
| B9J09_RS06755 () | 1367369..1367605 | + | 237 | Protein_1233 | EexN family lipoprotein | - |
| B9J09_RS06765 () | 1368430..1369929 | + | 1500 | WP_080939590.1 | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | - |
| B9J09_RS06770 () | 1370307..1371512 | - | 1206 | WP_046419701.1 | AGE family epimerase/isomerase | - |
| B9J09_RS06775 () | 1371509..1372525 | - | 1017 | WP_046419699.1 | carbohydrate kinase | - |
| B9J09_RS06780 () | 1372522..1373802 | - | 1281 | WP_046419696.1 | L-fucose-proton symporter | VF |
| B9J09_RS06785 () | 1374672..1375307 | - | 636 | WP_046419693.1 | DUF2058 domain-containing protein | - |
| B9J09_RS06790 () | 1375353..1375589 | - | 237 | WP_046419691.1 | SlyX family protein | - |
| B9J09_RS06795 () | 1375582..1376934 | - | 1353 | WP_046419690.1 | UDP-glucose 6-dehydrogenase TuaD | VF |
| B9J09_RS06800 () | 1376959..1377915 | - | 957 | WP_023906638.1 | putative FKBP-type peptidyl-prolyl cis-trans isomerase FkpA | VF |
| B9J09_RS06805 () | 1378557..1379048 | - | 492 | WP_171817079.1 | glutathione peroxidase | - |
| B9J09_RS12410 () | 1379501..1379662 | - | 162 | WP_010894100.1 | hypothetical protein | - |
| B9J09_RS06815 () | 1379881..1380756 | + | 876 | WP_023906641.1 | ABC transporter ATP-binding protein | - |
| B9J09_RS06820 () | 1380753..1381730 | + | 978 | WP_046419683.1 | hypothetical protein | - |
| B9J09_RS06825 () | 1381972..1382418 | + | 447 | WP_031336674.1 | hypothetical protein | - |
| B9J09_RS06830 () | 1382608..1382827 | - | 220 | Protein_1247 | tail fiber protein | - |
| B9J09_RS06835 () | 1383019..1383315 | + | 297 | WP_046419679.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| B9J09_RS06840 () | 1383318..1383611 | + | 294 | WP_004085592.1 | putative addiction module antidote protein | Antitoxin Detail |
| B9J09_RS06845 () | 1383667..1384020 | - | 354 | WP_046419676.1 | hypothetical protein | - |
| B9J09_RS06850 () | 1384017..1384397 | - | 381 | Protein_1251 | hypothetical protein | - |
| B9J09_RS06855 () | 1384935..1385951 | + | 1017 | WP_060870179.1 | Protease PrtS | VF |
| B9J09_RS06860 () | 1385938..1386312 | + | 375 | WP_060870180.1 | hypothetical protein | - |
| B9J09_RS06865 () | 1386336..1386608 | + | 273 | WP_060871504.1 | helix-turn-helix domain-containing protein | - |
| B9J09_RS06870 () | 1386580..1387146 | + | 567 | WP_081089935.1 | SocA family protein | - |
| B9J09_RS06875 () | 1387146..1387373 | + | 228 | WP_046419974.1 | hypothetical protein | - |
| B9J09_RS06880 () | 1387374..1388537 | - | 1164 | WP_046419971.1 | phage tail protein | - |
| B9J09_RS06885 () | 1388541..1389101 | - | 561 | WP_046419969.1 | DUF2612 domain-containing protein | - |
| B9J09_RS06890 () | 1389098..1390243 | - | 1146 | WP_046419967.1 | baseplate J/gp47 family protein | - |
| B9J09_RS06895 () | 1390346..1390642 | + | 297 | WP_004085590.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| B9J09_RS06900 () | 1390645..1390938 | + | 294 | WP_004085592.1 | putative addiction module antidote protein | Antitoxin Detail |
| B9J09_RS06905 () | 1390994..1391347 | - | 354 | WP_046419963.1 | hypothetical protein | - |
| B9J09_RS06910 () | 1391344..1391985 | - | 642 | WP_046419962.1 | hypothetical protein | - |
| B9J09_RS06915 () | 1391982..1392812 | - | 831 | WP_046419672.1 | hypothetical protein | - |
| B9J09_RS06920 () | 1392809..1393126 | - | 318 | WP_046419669.1 | hypothetical protein | - |
| B9J09_RS06925 () | 1393126..1393896 | - | 771 | WP_046419667.1 | hypothetical protein | - |
| B9J09_RS06930 () | 1394304..1394561 | - | 258 | WP_046419904.1 | Blp family class II bacteriocin | - |
| B9J09_RS06935 () | 1394866..1396755 | - | 1890 | WP_046419664.1 | hypothetical protein | - |
| B9J09_RS12640 () | 1396712..1396876 | - | 165 | WP_171817074.1 | hypothetical protein | - |
| B9J09_RS06940 () | 1396903..1397325 | - | 423 | WP_046419661.1 | hypothetical protein | - |
| B9J09_RS06945 () | 1397322..1397759 | - | 438 | WP_004087249.1 | DUF3277 family protein | - |
| B9J09_RS06950 () | 1397769..1399265 | - | 1497 | WP_046419658.1 | DUF3383 domain-containing protein | - |
| B9J09_RS06955 () | 1399266..1399799 | - | 534 | WP_171817073.1 | hypothetical protein | - |
| B9J09_RS06960 () | 1399723..1400103 | - | 381 | WP_171817072.1 | hypothetical protein | - |
| B9J09_RS06965 () | 1400078..1400557 | - | 480 | WP_046419654.1 | hypothetical protein | - |
| B9J09_RS06970 () | 1400554..1400922 | - | 369 | WP_046419652.1 | DUF4054 domain-containing protein | - |
| B9J09_RS06975 () | 1400922..1401275 | - | 354 | WP_046419651.1 | hypothetical protein | - |
| B9J09_RS06980 () | 1401341..1402324 | - | 984 | WP_046419650.1 | DUF2184 domain-containing protein | - |
| B9J09_RS06985 () | 1402334..1402816 | - | 483 | WP_046419648.1 | hypothetical protein | - |
| B9J09_RS06990 () | 1402844..1404034 | - | 1191 | WP_046419647.1 | DUF2213 domain-containing protein | - |
| B9J09_RS06995 () | 1404034..1404879 | - | 846 | WP_046419646.1 | phage head morphogenesis protein | - |
| B9J09_RS07000 () | 1404952..1405290 | + | 339 | WP_046419644.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| B9J09_RS07005 () | 1405287..1405568 | + | 282 | WP_046419643.1 | helix-turn-helix domain-containing protein | - |
| B9J09_RS07010 () | 1405617..1407005 | - | 1389 | WP_171817071.1 | DUF1073 domain-containing protein | - |
| B9J09_RS07015 () | 1407002..1408552 | - | 1551 | WP_046419640.1 | phage terminase large subunit | - |
| B9J09_RS07020 () | 1408503..1408901 | - | 399 | WP_046419638.1 | hypothetical protein | - |
| B9J09_RS07025 () | 1408993..1409268 | - | 276 | WP_196484578.1 | hypothetical protein | - |
| B9J09_RS07030 () | 1409207..1409668 | - | 462 | WP_046419636.1 | hypothetical protein | - |
| B9J09_RS07035 () | 1409658..1409987 | - | 330 | WP_046419634.1 | phage holin family protein | - |
| B9J09_RS07040 () | 1409980..1410477 | - | 498 | WP_023907472.1 | lysozyme | - |
| B9J09_RS07045 () | 1410682..1411020 | - | 339 | WP_004085696.1 | BrnA antitoxin family protein | - |
| B9J09_RS07050 () | 1411007..1411273 | - | 267 | WP_010894061.1 | BrnT family toxin | - |
| B9J09_RS07055 () | 1411461..1412159 | - | 699 | WP_046419632.1 | hypothetical protein | - |
| B9J09_RS07060 () | 1412288..1412749 | - | 462 | WP_171817069.1 | hypothetical protein | - |
| B9J09_RS07065 () | 1412746..1413510 | - | 765 | WP_171817068.1 | hypothetical protein | - |
| B9J09_RS07070 () | 1413416..1414394 | - | 979 | Protein_1296 | DUF1376 domain-containing protein | - |
| B9J09_RS07075 () | 1414391..1414789 | - | 399 | Protein_1297 | hypothetical protein | - |
| B9J09_RS07080 () | 1414768..1415088 | + | 321 | WP_080939588.1 | DUF4224 domain-containing protein | - |
| B9J09_RS07085 () | 1415088..1416107 | + | 1020 | WP_046419629.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| B9J09_RS07090 () | 1416252..1417661 | - | 1410 | WP_046419886.1 | class II fumarate hydratase | - |
| B9J09_RS07095 () | 1417766..1417906 | - | 141 | WP_155641460.1 | hypothetical protein | - |
| B9J09_RS07100 () | 1418250..1419617 | + | 1368 | WP_046419626.1 | adenylosuccinate lyase | - |
| B9J09_RS07105 () | 1419788..1421056 | + | 1269 | WP_046419624.1 | cupin domain-containing protein | - |
| B9J09_RS07110 () | 1422251..1425079 | + | 2829 | WP_046419622.1 | 2-oxoglutarate dehydrogenase E1 component | - |
| B9J09_RS07115 () | 1425121..1426296 | + | 1176 | WP_046419619.1 | dihydrolipoyllysine-residue succinyltransferase | - |
| B9J09_RS07120 () | 1426312..1426740 | + | 429 | WP_023906676.1 | hypothetical protein | - |
| B9J09_RS07125 () | 1426733..1428169 | + | 1437 | WP_031337879.1 | dihydrolipoyl dehydrogenase | - |
| B9J09_RS07130 () | 1429344..1429805 | - | 462 | WP_046419616.1 | glycine zipper 2TM domain-containing protein | - |
| B9J09_RS07135 () | 1430520..1431350 | + | 831 | WP_010894044.1 | tRNA threonylcarbamoyladenosine dehydratase | - |
| B9J09_RS12645 () | 1431919..1432056 | + | 138 | WP_162493532.1 | hypothetical protein | - |
| B9J09_RS07145 () | 1432667..1433356 | - | 690 | WP_046419884.1 | cAMP-activated global transcriptional regulator CRP | - |
| B9J09_RS07150 () | 1433499..1434293 | + | 795 | WP_004083667.1 | adenosylmethionine decarboxylase | - |
| B9J09_RS07155 () | 1434461..1435114 | - | 654 | WP_046419882.1 | 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase | - |
| B9J09_RS07160 () | 1435335..1435763 | + | 429 | WP_010894037.1 | 50S ribosomal protein L13 | - |
| B9J09_RS07165 () | 1435768..1436160 | + | 393 | WP_046419612.1 | 30S ribosomal protein S9 | - |
| B9J09_RS07170 () | 1436378..1437667 | - | 1290 | WP_010894035.1 | citrate synthase | - |
| B9J09_RS07175 () | 1437895..1438137 | - | 243 | WP_004083672.1 | type B 50S ribosomal protein L31 | - |
| B9J09_RS07180 () | 1438454..1439143 | - | 690 | WP_046419608.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
| B9J09_RS07185 () | 1439269..1440204 | - | 936 | WP_031336710.1 | Hydrogen peroxide-inducible genes activator | VF |
| B9J09_RS07190 () | 1440309..1441904 | - | 1596 | WP_046419606.1 | Alkyl hydroperoxide reductase subunit F | VF |
| B9J09_RS07195 () | 1442102..1442662 | - | 561 | WP_020852892.1 | peroxiredoxin | - |
| B9J09_RS07200 () | 1443041..1447882 | - | 4842 | WP_085808108.1 | YadA-like family protein | - |
| B9J09_RS07210 () | 1448676..1451003 | - | 2328 | WP_046419602.1 | type II secretion system secretin GspD | - |
| B9J09_RS07215 () | 1451048..1451815 | - | 768 | WP_010894027.1 | hypothetical protein | - |
| B9J09_RS07220 () | 1451805..1452437 | - | 633 | WP_046419599.1 | type II secretion system protein M | - |
| B9J09_RS07225 () | 1452418..1453548 | - | 1131 | WP_046419596.1 | PilN domain-containing protein | - |
| B9J09_RS07230 () | 1453545..1454390 | - | 846 | WP_010894024.1 | hypothetical protein | VF |
| B9J09_RS07235 () | 1454390..1455016 | - | 627 | WP_010894023.1 | type II secretion system protein J | - |
| B9J09_RS07240 () | 1455013..1455411 | - | 399 | WP_010894022.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| B9J09_RS07245 () | 1455408..1455914 | - | 507 | WP_010894021.1 | Tfp pilus assembly protein FimT/FimU | - |
| B9J09_RS07250 () | 1455920..1456354 | - | 435 | WP_004083686.1 | Type II secretion system protein G | VF |
| B9J09_RS07255 () | 1456571..1457788 | - | 1218 | WP_010894019.1 | Type II secretion system protein F | VF |
| B9J09_RS07260 () | 1457824..1459524 | - | 1701 | WP_046419592.1 | type II secretion system ATPase GspE | - |
| B9J09_RS07265 () | 1459816..1462809 | - | 2994 | WP_046419589.1 | YadA-like family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|