MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 37362 bp
Accession: NZ_CP020836 Location: 1..37362 Organism: Escherichia coli strain CFSAN051542 Replicon: plasmid pCFSAN051542
Accession: NZ_CP020836 Location: 1..37362 Organism: Escherichia coli strain CFSAN051542 Replicon: plasmid pCFSAN051542
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCD20_RS25540 () | 1558..1971 | + | 414 | WP_085381548.1 | conjugal transfer protein | - |
| BCD20_RS25545 () | 1968..2270 | + | 303 | WP_085381549.1 | conjugal transfer protein | - |
| BCD20_RS26270 () | 2431..2577 | + | 147 | WP_000382584.1 | hypothetical protein | - |
| BCD20_RS25550 () | 2581..3156 | + | 576 | WP_001198968.1 | hypothetical protein | - |
| BCD20_RS25555 () | 3161..5314 | + | 2154 | WP_085381550.1 | type IA DNA topoisomerase | - |
| BCD20_RS25560 () | 5311..5517 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| BCD20_RS25565 () | 5532..6238 | - | 707 | Protein_7 | IS1 family transposase | - |
| BCD20_RS25570 () | 6520..7110 | + | 591 | WP_014106760.1 | hypothetical protein | VF |
| BCD20_RS25575 () | 7206..7907 | + | 702 | WP_000820818.1 | putative fimbrial chaperone YadV | VF |
| BCD20_RS25580 () | 7919..10405 | + | 2487 | WP_000813718.1 | Outer membrane usher protein HtrE | VF |
| BCD20_RS25585 () | 10396..11391 | + | 996 | WP_085381551.1 | Fimbria adhesin protein | VF |
| BCD20_RS25590 () | 11405..12040 | + | 636 | WP_085381552.1 | hypothetical protein | VF |
| BCD20_RS25600 () | 12121..12817 | + | 697 | Protein_13 | IS1 family transposase | - |
| BCD20_RS25605 () | 14115..14294 | + | 180 | WP_012291479.1 | hypothetical protein | - |
| BCD20_RS25610 () | 14410..15054 | - | 645 | WP_000203199.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| BCD20_RS25615 () | 15349..15969 | + | 621 | WP_000864788.1 | ParA family protein | - |
| BCD20_RS25620 () | 16021..16251 | + | 231 | WP_000051066.1 | partitioning protein | - |
| BCD20_RS25625 () | 16675..17739 | + | 1065 | WP_012291478.1 | AAA family ATPase | - |
| BCD20_RS25635 () | 18277..18699 | - | 423 | WP_179364589.1 | DNA distortion polypeptide 3 | - |
| BCD20_RS25640 () | 18767..19213 | - | 447 | WP_085381553.1 | hypothetical protein | - |
| BCD20_RS25645 () | 19253..20089 | - | 837 | WP_001575533.1 | replication initiation protein | - |
| BCD20_RS25655 () | 21349..21600 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| BCD20_RS25660 () | 21590..21871 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BCD20_RS25665 () | 22017..22340 | + | 324 | WP_001181909.1 | hypothetical protein | - |
| BCD20_RS25670 () | 22385..22630 | + | 246 | WP_000356542.1 | hypothetical protein | - |
| BCD20_RS25675 () | 22620..22835 | + | 216 | WP_001180117.1 | hypothetical protein | - |
| BCD20_RS25680 () | 22928..23257 | + | 330 | WP_000866654.1 | hypothetical protein | - |
| BCD20_RS25685 () | 23300..23479 | + | 180 | WP_012301145.1 | hypothetical protein | - |
| BCD20_RS25695 () | 23711..23983 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| BCD20_RS26275 () | 24240..24314 | + | 75 | Protein_30 | DNA distortion polypeptide 3 | - |
| BCD20_RS25700 () | 24309..24854 | + | 546 | WP_012301143.1 | hypothetical protein | - |
| BCD20_RS25705 () | 24857..26023 | + | 1167 | WP_122987139.1 | hypothetical protein | Relaxase |
| BCD20_RS25710 () | 26376..26894 | + | 519 | WP_012301141.1 | ActX protein | - |
| BCD20_RS25715 () | 26824..27036 | + | 213 | WP_000125172.1 | hypothetical protein | - |
| BCD20_RS25720 () | 27069..27716 | + | 648 | WP_012301140.1 | Type IV secretion system protein virB1 | VF |
| BCD20_RS25725 () | 27694..27990 | + | 297 | WP_000916182.1 | TrbC/VirB2 family protein | - |
| BCD20_RS25730 () | 28009..30762 | + | 2754 | WP_085381556.1 | Type IV secretion system protein virB4 | VF |
| BCD20_RS25735 () | 30773..31531 | + | 759 | WP_000744200.1 | pilus assembly protein | - |
| BCD20_RS25740 () | 31532..31819 | + | 288 | WP_000835347.1 | EexN family lipoprotein | - |
| BCD20_RS25745 () | 31828..32958 | + | 1131 | WP_085381557.1 | type IV secretion system protein | - |
| BCD20_RS25750 () | 33203..33916 | + | 714 | WP_000394612.1 | type IV secretion system protein | - |
| BCD20_RS25755 () | 33921..34850 | + | 930 | WP_000783372.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| BCD20_RS25760 () | 34847..36052 | + | 1206 | WP_085381558.1 | Type IV secretion system protein virB10 | VF |
| BCD20_RS25765 () | 36054..37085 | + | 1032 | WP_085381559.1 | Type IV secretion system protein VirB11 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|