MGE detailed information
MGE type: Prophage MGE length: 48647 bp
Accession: NZ_CP020835 Location: 3761675..3810321 Organism: Escherichia coli strain CFSAN051542 Replicon: chromosome
Accession: NZ_CP020835 Location: 3761675..3810321 Organism: Escherichia coli strain CFSAN051542 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCD20_RS19615 () | 3756716..3757603 | + | 888 | WP_001005473.1 | heat resistance protein YfdX2 | - |
| BCD20_RS19620 () | 3757693..3758304 | + | 612 | WP_001090787.1 | heat resistance membrane protein HdeD-GI | - |
| BCD20_RS19625 () | 3758384..3759529 | + | 1146 | WP_057107660.1 | hypothetical protein | - |
| BCD20_RS19630 () | 3759519..3759959 | + | 441 | WP_000786815.1 | heat resistance system thioredoxin Trx-GI | - |
| BCD20_RS19635 () | 3759963..3761678 | + | 1716 | WP_044864659.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| BCD20_RS19640 () | 3761675..3762172 | + | 498 | WP_000843382.1 | heat resistance protein PsiE-GI | - |
| BCD20_RS19645 () | 3762150..3763115 | + | 966 | WP_044864660.1 | M48 family metalloprotease | - |
| BCD20_RS19650 () | 3763140..3764291 | + | 1152 | WP_000323729.1 | Putative serine protease HhoB | VF |
| BCD20_RS19655 () | 3764516..3765085 | - | 570 | Protein_3606 | IS5 family transposase ISThi1 | Transposase |
| BCD20_RS19660 () | 3765081..3765775 | - | 695 | Protein_3607 | IS5 family transposase ISThi1 | Transposase |
| BCD20_RS19670 () | 3765904..3766601 | + | 698 | Protein_3608 | IS1 family transposase IS1R | Transposase |
| BCD20_RS19680 () | 3766984..3767847 | + | 864 | WP_001065555.1 | GTPase family protein | - |
| BCD20_RS19685 () | 3767939..3768760 | + | 822 | WP_085381467.1 | DUF945 domain-containing protein | - |
| BCD20_RS19690 () | 3768977..3769678 | + | 702 | WP_023326104.1 | WYL domain-containing protein | - |
| BCD20_RS19695 () | 3769719..3769955 | + | 237 | WP_057107659.1 | hypothetical protein | - |
| BCD20_RS19700 () | 3769955..3770398 | + | 444 | WP_016239438.1 | phage transcriptional regulator | - |
| BCD20_RS19705 () | 3770422..3770889 | + | 468 | WP_057107658.1 | hypothetical protein | - |
| BCD20_RS19710 () | 3770966..3771205 | + | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| BCD20_RS19715 () | 3771303..3771761 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| BCD20_RS19720 () | 3771777..3772252 | + | 476 | Protein_3617 | RadC family protein | - |
| BCD20_RS19725 () | 3772261..3772482 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| BCD20_RS19730 () | 3772501..3772818 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| BCD20_RS19735 () | 3772839..3773180 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| BCD20_RS19740 () | 3773720..3774934 | + | 1215 | WP_033801639.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| BCD20_RS19745 () | 3774970..3775248 | - | 279 | WP_033801635.1 | hypothetical protein | - |
| BCD20_RS19750 () | 3775587..3777452 | - | 1866 | WP_045148748.1 | cell envelope integrity protein TolA | - |
| BCD20_RS19755 () | 3777445..3777642 | - | 198 | WP_033801633.1 | hypothetical protein | - |
| BCD20_RS19765 () | 3777991..3778350 | - | 360 | WP_033801631.1 | hypothetical protein | - |
| BCD20_RS19770 () | 3778347..3778562 | - | 216 | WP_033801630.1 | hypothetical protein | - |
| BCD20_RS19775 () | 3778653..3779350 | + | 698 | Protein_3627 | IS1 family transposase IS1R | Transposase |
| BCD20_RS19780 () | 3780009..3780347 | - | 339 | WP_085381469.1 | hypothetical protein | - |
| BCD20_RS19785 () | 3780340..3780576 | - | 237 | WP_085381539.1 | hypothetical protein | - |
| BCD20_RS26065 () | 3781131..3781424 | - | 294 | WP_157108329.1 | hypothetical protein | - |
| BCD20_RS19800 () | 3781566..3782263 | - | 698 | Protein_3631 | IS1 family transposase IS1R | Transposase |
| BCD20_RS19810 () | 3782321..3782527 | + | 207 | Protein_3632 | IS3 family transposase ISEc48 | Transposase |
| BCD20_RS19815 () | 3782569..3783312 | - | 744 | WP_000246052.1 | AraC family transcriptional regulator | - |
| BCD20_RS19825 () | 3783837..3784817 | - | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
| BCD20_RS19835 () | 3785076..3786239 | + | 1164 | WP_000051905.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| BCD20_RS19845 () | 3786412..3787812 | + | 1401 | WP_001407714.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| BCD20_RS19850 () | 3787929..3788369 | + | 441 | WP_000224818.1 | hypothetical protein | - |
| BCD20_RS19855 () | 3788366..3788590 | + | 225 | WP_001272156.1 | helix-turn-helix domain-containing protein | - |
| BCD20_RS19860 () | 3788709..3789563 | + | 855 | WP_023567973.1 | hypothetical protein | - |
| BCD20_RS19865 () | 3789590..3790171 | + | 582 | Protein_3640 | recombinase family protein | - |
| BCD20_RS19870 () | 3790226..3791439 | + | 1214 | WP_139371347.1 | IS3 family transposase IS629 | Transposase |
| BCD20_RS19875 () | 3791482..3791601 | + | 120 | Protein_3642 | winged helix-turn-helix transcriptional regulator | - |
| BCD20_RS19880 () | 3791871..3792497 | + | 627 | WP_032416083.1 | inovirus Gp2 family protein | - |
| BCD20_RS19885 () | 3792585..3793376 | - | 792 | WP_023567978.1 | hypothetical protein | - |
| BCD20_RS19890 () | 3793491..3794669 | - | 1179 | WP_041520800.1 | GIY-YIG nuclease family protein | - |
| BCD20_RS19895 () | 3794662..3796707 | - | 2046 | WP_023567979.1 | DEAD/DEAH box helicase family protein | - |
| BCD20_RS19900 () | 3796704..3799487 | - | 2784 | WP_085381542.1 | class I SAM-dependent DNA methyltransferase | - |
| BCD20_RS19905 () | 3800019..3801290 | - | 1272 | WP_085381471.1 | Y-family DNA polymerase | - |
| BCD20_RS26230 () | 3801290..3801376 | - | 87 | Protein_3649 | peptidase | - |
| BCD20_RS19910 () | 3801648..3802580 | - | 933 | WP_000811015.1 | 2-hydroxyacid dehydrogenase | - |
| BCD20_RS19915 () | 3802594..3803904 | - | 1311 | WP_001090735.1 | MFS transporter | - |
| BCD20_RS19920 () | 3804003..3805151 | - | 1149 | WP_000705120.1 | galactonate dehydratase | - |
| BCD20_RS19925 () | 3805148..3805765 | - | 618 | WP_001198679.1 | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | - |
| BCD20_RS19930 () | 3805749..3806627 | - | 879 | WP_000204077.1 | 2-dehydro-3-deoxygalactonokinase | - |
| BCD20_RS19935 () | 3806624..3807313 | - | 690 | WP_000156556.1 | D-galactonate utilization transcriptional regulator DgoR | - |
| BCD20_RS19945 () | 3807882..3808073 | - | 192 | Protein_3656 | HAD hydrolase family protein | - |
| BCD20_RS19950 () | 3808064..3808324 | - | 261 | Protein_3657 | transposase | - |
| BCD20_RS19955 () | 3808324..3808662 | + | 339 | WP_085381473.1 | theronine dehydrogenase | - |
| BCD20_RS19960 () | 3808700..3809397 | - | 698 | Protein_3659 | IS1 family transposase | - |
| BCD20_RS19965 () | 3809455..3810321 | + | 867 | Protein_3660 | hypothetical protein | - |
| BCD20_RS19970 () | 3810444..3811319 | + | 876 | WP_023567988.1 | GTPase family protein | - |
| BCD20_RS19980 () | 3811580..3812293 | + | 714 | WP_023567990.1 | sporulation transcriptional regulator SpoIIID | - |
| BCD20_RS26235 () | 3812295..3812444 | + | 150 | WP_001458941.1 | hypothetical protein | - |
| BCD20_RS19985 () | 3812456..3812671 | + | 216 | WP_023567991.1 | hypothetical protein | - |
| BCD20_RS19990 () | 3812724..3813668 | + | 945 | WP_077255291.1 | hypothetical protein | - |
| BCD20_RS19995 () | 3813756..3813989 | + | 234 | WP_023567993.1 | DUF905 domain-containing protein | - |
| BCD20_RS20000 () | 3814100..3814921 | + | 822 | WP_023567994.1 | DUF945 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|