MGE detailed information
MGE type: IS/Tn MGE length: 1329 bp
Accession: NZ_CP020753 Location: 407735..409063 Organism: Shigella flexneri 1c strain Y394 Replicon: chromosome
Accession: NZ_CP020753 Location: 407735..409063 Organism: Shigella flexneri 1c strain Y394 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7485_RS01965 (404271) | 404271..404609 | + | 339 | WP_000780338.1 | P-II family nitrogen regulator | - |
| B7485_RS01970 (404639) | 404639..405925 | + | 1287 | WP_000685036.1 | ammonium transporter AmtB | - |
| B7485_RS01975 (405974) | 405974..406834 | - | 861 | WP_000075874.1 | acyl-CoA thioesterase II | - |
| B7485_RS01980 (407052) | 407052..407624 | + | 573 | WP_000779831.1 | YbaY family lipoprotein | - |
| B7485_RS01985 (407717) | 407717..409063 | + | 1347 | WP_005061315.1 | IS4-like element IS4 family transposase | - |
| B7485_RS01990 (409093) | 409093..409404 | - | 312 | WP_000409911.1 | MGMT family protein | - |
| B7485_RS02000 (409783) | 409783..410136 | + | 354 | WP_000878140.1 | DUF1428 domain-containing protein | - |
| B7485_RS02005 (410178) | 410178..411728 | - | 1551 | WP_005106783.1 | cyclic-guanylate-specific phosphodiesterase PdeB | - |
| B7485_RS02010 (411892) | 411892..412362 | - | 471 | WP_000136192.1 | YlaC family protein | - |
| B7485_RS02015 (412478) | 412478..413029 | - | 552 | WP_000102577.1 | maltose O-acetyltransferase | - |
| B7485_RS02020 (413201) | 413201..413419 | - | 219 | WP_001291435.1 | HHA domain-containing protein | Toxin Detail |
| B7485_RS02025 (413445) | 413445..413819 | - | 375 | WP_000344797.1 | Hha toxicity modulator TomB | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Shigella flexneri 5a str. M90T | NZ_CP037923 | 1937675..1939003 | 0.001 |