MGE detailed information
MGE type: Prophage MGE length: 98621 bp
Accession: NZ_CP020516 Location: 2338900..2437520 Organism: Escherichia coli strain 222 Replicon: chromosome
Accession: NZ_CP020516 Location: 2338900..2437520 Organism: Escherichia coli strain 222 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9P13_RS12145 () | 2334595..2335359 | + | 765 | WP_001308626.1 | gamma-glutamyl-gamma-aminobutyrate hydrolase | - |
| A9P13_RS12150 () | 2335386..2335943 | + | 558 | WP_001278727.1 | HTH-type transcriptional regulator PuuR | - |
| A9P13_RS12155 () | 2336093..2337580 | + | 1488 | WP_001009159.1 | aldehyde dehydrogenase PuuC | - |
| A9P13_RS12160 () | 2337582..2338862 | + | 1281 | WP_020233230.1 | gamma-glutamylputrescine oxidase | - |
| A9P13_RS12165 () | 2338900..2340165 | + | 1266 | WP_000069237.1 | hypothetical protein | VF |
| A9P13_RS12170 () | 2340282..2341629 | - | 1348 | Protein_2236 | IS3 family transposase | - |
| A9P13_RS12175 () | 2341720..2342697 | - | 978 | WP_000852835.1 | hypothetical protein | VF |
| A9P13_RS12180 () | 2342864..2343532 | + | 669 | WP_000511025.1 | phage shock protein PspA | - |
| A9P13_RS12185 () | 2343586..2343810 | + | 225 | WP_001274963.1 | envelope stress response membrane protein PspB | - |
| A9P13_RS12190 () | 2343810..2344169 | + | 360 | WP_000907387.1 | envelope stress response membrane protein PspC | - |
| A9P13_RS12195 () | 2344178..2344399 | + | 222 | WP_001295585.1 | phage shock protein PspD | - |
| A9P13_RS12200 () | 2344474..2344788 | + | 315 | WP_000473128.1 | thiosulfate sulfurtransferase PspE | - |
| A9P13_RS12205 () | 2345002..2346681 | + | 1680 | WP_000810511.1 | glucosylglycerate phosphorylase | - |
| A9P13_RS12210 () | 2346696..2347988 | + | 1293 | WP_001523138.1 | ABC transporter substrate-binding protein | - |
| A9P13_RS12215 () | 2348009..2348890 | + | 882 | WP_001080790.1 | sugar ABC transporter permease | - |
| A9P13_RS12220 () | 2348877..2349719 | + | 843 | WP_000224659.1 | carbohydrate ABC transporter permease | - |
| A9P13_RS12225 () | 2349750..2350802 | + | 1053 | WP_001523140.1 | zinc-binding alcohol dehydrogenase | - |
| A9P13_RS12230 () | 2350821..2351609 | + | 789 | WP_001523146.1 | sugar phosphate isomerase/epimerase | - |
| A9P13_RS12235 () | 2351619..2352674 | + | 1056 | WP_000833579.1 | Gfo/Idh/MocA family oxidoreductase | - |
| A9P13_RS12240 () | 2352671..2354938 | + | 2268 | WP_021523070.1 | kojibiose phosphorylase | - |
| A9P13_RS12245 () | 2354935..2355594 | + | 660 | WP_001523149.1 | beta-phosphoglucomutase | - |
| A9P13_RS12250 () | 2355608..2356690 | + | 1083 | WP_000057972.1 | hypothetical protein | VF |
| A9P13_RS12255 () | 2356735..2357640 | + | 906 | WP_000735247.1 | monomeric porin OmpG | - |
| A9P13_RS12260 () | 2357751..2358749 | - | 999 | WP_000075360.1 | LacI family transcriptional regulator | - |
| A9P13_RS12265 () | 2358904..2360301 | + | 1398 | WP_000825768.1 | YcjX family protein | - |
| A9P13_RS12270 () | 2360298..2361359 | + | 1062 | WP_000138728.1 | YcjF family protein | - |
| A9P13_RS12275 () | 2361507..2363048 | + | 1542 | WP_001306544.1 | hypothetical protein | VF |
| A9P13_RS12280 () | 2363092..2363598 | - | 507 | WP_000084387.1 | thiol peroxidase | - |
| A9P13_RS12285 () | 2363717..2364682 | + | 966 | WP_001366252.1 | L-Ala-D/L-Glu epimerase | - |
| A9P13_RS12290 () | 2364657..2365385 | - | 729 | WP_000219121.1 | murein tripeptide amidase MpaA | - |
| A9P13_RS12295 () | 2365676..2366314 | - | 639 | WP_001523154.1 | SDR family oxidoreductase | - |
| A9P13_RS12300 () | 2366385..2367305 | - | 921 | WP_001523155.1 | alpha/beta hydrolase | - |
| A9P13_RS12305 () | 2367443..2368342 | + | 900 | WP_000817700.1 | hypothetical protein | VF |
| A9P13_RS12310 () | 2368679..2370292 | + | 1614 | WP_000683027.1 | murein tripeptide ABC transporter substrate-binding protein MppA | - |
| A9P13_RS12315 () | 2370343..2371374 | - | 1032 | WP_000559903.1 | low conductance mechanosensitive channel YnaI | - |
| A9P13_RS12320 () | 2371618..2371875 | + | 258 | WP_000605090.1 | DUF2534 family protein | - |
| A9P13_RS12325 () | 2371925..2372875 | - | 951 | WP_001262123.1 | universal stress protein UspE | - |
| A9P13_RS12330 () | 2373027..2373779 | - | 753 | WP_000611911.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| A9P13_RS12335 () | 2373974..2374489 | - | 516 | WP_000945046.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| A9P13_RS12340 () | 2374500..2376026 | - | 1527 | WP_000062969.1 | p-aminobenzoyl-glutamate transporter | - |
| A9P13_RS12350 () | 2376063..2377508 | - | 1446 | WP_001523161.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| A9P13_RS12355 () | 2377508..2378818 | - | 1311 | WP_001523163.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| A9P13_RS12360 () | 2378994..2379902 | + | 909 | WP_000885457.1 | LysR family transcriptional regulator | - |
| A9P13_RS12370 () | 2380075..2380890 | - | 816 | WP_000156573.1 | hypothetical protein | VF |
| A9P13_RS12375 () | 2380987..2382015 | + | 1029 | WP_001523164.1 | hypothetical protein | VF |
| A9P13_RS12380 () | 2382012..2383526 | + | 1515 | WP_020233354.1 | DHA2 family efflux MFS transporter permease subunit | - |
| A9P13_RS12385 () | 2383721..2384284 | + | 564 | WP_001046832.1 | DNA endonuclease SmrA | - |
| A9P13_RS12390 () | 2384305..2385237 | - | 933 | WP_020233353.1 | sensor domain-containing diguanylate cyclase | - |
| A9P13_RS12395 () | 2385302..2385999 | + | 698 | Protein_2279 | IS1 family transposase | - |
| A9P13_RS12400 () | 2386015..2386314 | - | 300 | Protein_2280 | sensor domain-containing diguanylate cyclase | - |
| A9P13_RS29120 () | 2386508..2386555 | + | 48 | WP_211180494.1 | protein YnaN | - |
| A9P13_RS12405 () | 2386569..2387552 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| A9P13_RS12415 () | 2388030..2389403 | + | 1374 | WP_000123748.1 | ATP-dependent RNA helicase DbpA | - |
| A9P13_RS12420 () | 2389532..2390467 | - | 936 | WP_001523172.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| A9P13_RS12425 () | 2390519..2391754 | - | 1236 | WP_000040839.1 | hypothetical protein ; Integrase | Integrase |
| A9P13_RS12430 () | 2391756..2391971 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| A9P13_RS12435 () | 2392071..2392259 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 2392075..2392253 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2392075..2392253 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2392075..2392253 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2392075..2392253 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| A9P13_RS12440 () | 2392297..2392446 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| A9P13_RS12445 () | 2392502..2393311 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| A9P13_RS12450 () | 2393304..2395904 | - | 2601 | WP_000105140.1 | exodeoxyribonuclease VIII | - |
| A9P13_RS12455 () | 2396006..2396281 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| A9P13_RS12460 () | 2396356..2396526 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| A9P13_RS12465 () | 2396526..2396747 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| A9P13_RS12475 () | 2397189..2397677 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| A9P13_RS12480 () | 2397674..2397829 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| A9P13_RS12495 () | 2398262..2398681 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| A9P13_RS12500 () | 2398761..2399015 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| A9P13_RS12505 () | 2399012..2399434 | + | 423 | WP_000693803.1 | hypothetical protein | - |
| A9P13_RS12510 () | 2399512..2400300 | + | 789 | WP_001396581.1 | hypothetical protein | - |
| A9P13_RS12515 () | 2400307..2401053 | + | 747 | WP_020233967.1 | ATP-binding protein | - |
| A9P13_RS12520 () | 2401076..2401837 | + | 762 | WP_000450716.1 | DUF1627 domain-containing protein | - |
| A9P13_RS12525 () | 2401853..2402275 | + | 423 | WP_029702111.1 | DUF977 family protein | - |
| A9P13_RS28700 () | 2402437..2402940 | + | 504 | WP_000137958.1 | hypothetical protein | - |
| A9P13_RS12540 () | 2403061..2403834 | - | 774 | WP_000200358.1 | KilA-N domain-containing protein | - |
| A9P13_RS12545 () | 2404357..2404482 | + | 126 | WP_001445775.1 | type I toxin-antitoxin system Hok family toxin | - |
| A9P13_RS12550 () | 2404565..2404906 | - | 342 | WP_001445776.1 | DUF1971 domain-containing protein | - |
| A9P13_RS12555 () | 2405774..2406373 | + | 600 | WP_000940344.1 | DUF1367 family protein | - |
| A9P13_RS12560 () | 2406373..2406663 | + | 291 | WP_000228032.1 | DUF1364 domain-containing protein | - |
| A9P13_RS12565 () | 2406660..2407202 | + | 543 | WP_000640106.1 | DUF1133 family protein | - |
| A9P13_RS12570 () | 2407424..2407993 | + | 570 | WP_001208722.1 | hypothetical protein | - |
| A9P13_RS12575 () | 2407962..2408264 | - | 303 | WP_001328752.1 | hypothetical protein | - |
| A9P13_RS12580 () | 2408341..2408682 | + | 342 | WP_000781775.1 | phage holin, lambda family | - |
| A9P13_RS12585 () | 2408686..2409162 | + | 477 | WP_023153991.1 | glycoside hydrolase family protein | - |
| A9P13_RS12590 () | 2409379..2409564 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| A9P13_RS12595 () | 2409761..2411218 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| A9P13_RS12605 () | 2411356..2412147 | + | 792 | WP_001291105.1 | ParB/Srx family N-terminal domain-containing protein | - |
| A9P13_RS12610 () | 2412140..2413072 | + | 933 | WP_020233805.1 | hypothetical protein | - |
| A9P13_RS12615 () | 2413008..2413259 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| A9P13_RS12620 () | 2413263..2414357 | + | 1095 | WP_000089448.1 | terminase small subunit | - |
| A9P13_RS12625 () | 2414338..2415639 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| A9P13_RS12630 () | 2415642..2417048 | + | 1407 | WP_000763701.1 | DUF4055 domain-containing protein | - |
| A9P13_RS12635 () | 2417032..2418144 | + | 1113 | WP_001363932.1 | hypothetical protein | - |
| A9P13_RS12640 () | 2418249..2419013 | + | 765 | WP_029702112.1 | hypothetical protein | - |
| A9P13_RS12645 () | 2419112..2420251 | + | 1140 | WP_020233804.1 | hypothetical protein | - |
| A9P13_RS28910 () | 2420294..2420470 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| A9P13_RS12650 () | 2420474..2420869 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| A9P13_RS12655 () | 2420869..2421252 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| A9P13_RS12660 () | 2421253..2421633 | + | 381 | WP_001029815.1 | hypothetical protein | - |
| A9P13_RS12665 () | 2421630..2422022 | + | 393 | WP_000673077.1 | hypothetical protein | - |
| A9P13_RS12670 () | 2422049..2423011 | + | 963 | WP_001328756.1 | hypothetical protein | - |
| A9P13_RS12675 () | 2423162..2423521 | + | 360 | WP_122452218.1 | hypothetical protein | - |
| A9P13_RS12680 () | 2423629..2423829 | + | 201 | WP_032139919.1 | hypothetical protein | - |
| A9P13_RS12685 () | 2423993..2427225 | + | 3233 | Protein_2333 | phage tail tape measure protein | - |
| A9P13_RS12690 () | 2427218..2427556 | + | 339 | WP_000024051.1 | phage tail protein | - |
| A9P13_RS12695 () | 2427556..2428254 | + | 699 | WP_001152432.1 | phage minor tail protein L | - |
| A9P13_RS12700 () | 2428260..2429003 | + | 744 | WP_001351716.1 | C40 family peptidase | - |
| A9P13_RS12705 () | 2428940..2429542 | + | 603 | WP_049286672.1 | tail assembly protein | - |
| A9P13_RS12710 () | 2429603..2433082 | + | 3480 | WP_021523093.1 | host specificity protein J | - |
| A9P13_RS12715 () | 2433150..2433749 | + | 600 | WP_001542091.1 | hypothetical protein | VF |
| A9P13_RS12720 () | 2433814..2436189 | + | 2376 | WP_042099016.1 | prophage tail fiber N-terminal domain-containing protein | - |
| A9P13_RS12725 () | 2436189..2436470 | + | 282 | WP_000654155.1 | hypothetical protein | - |
| A9P13_RS12730 () | 2436480..2437520 | + | 1041 | WP_001314683.1 | tail fiber domain-containing protein | - |
| A9P13_RS12735 () | 2437563..2437856 | + | 294 | WP_001405873.1 | hypothetical protein | - |
| A9P13_RS12740 () | 2438126..2438277 | - | 152 | Protein_2344 | DinI-like family protein | - |
| A9P13_RS12745 () | 2438402..2439196 | - | 795 | WP_000354607.1 | hypothetical protein | - |
| A9P13_RS12750 () | 2439669..2440526 | - | 858 | WP_000968125.1 | iron/manganese ABC transporter permease subunit SitD | - |
| A9P13_RS12755 () | 2440523..2441380 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| A9P13_RS12760 () | 2441377..2442204 | - | 828 | WP_029702064.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|