MGE detailed information
MGE type: Conjugative plasmid MGE length: 85008 bp
Accession: NZ_CP020511 Location: 1..85008 Organism: Escherichia coli strain 165 Replicon: plasmid unnamed2
Accession: NZ_CP020511 Location: 1..85008 Organism: Escherichia coli strain 165 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AWB10_RS27365 () | 286..795 | + | 510 | WP_012783913.1 | hypothetical protein | - |
| AWB10_RS29105 () | 1028..1168 | - | 141 | WP_032072206.1 | hypothetical protein | - |
| AWB10_RS27385 () | 1865..2896 | - | 1032 | WP_012783912.1 | replication protein | - |
| AWB10_RS27400 () | 3869..4132 | + | 264 | WP_001749178.1 | ash family protein | - |
| AWB10_RS27405 () | 4050..4337 | + | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| AWB10_RS27415 () | 4779..5312 | + | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| AWB10_RS27425 () | 5566..6249 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| AWB10_RS27435 () | 6422..6973 | + | 552 | WP_000744644.1 | hypothetical protein | - |
| AWB10_RS27440 () | 7135..7389 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| AWB10_RS27445 () | 7556..7852 | + | 297 | WP_000494780.1 | hypothetical protein | - |
| AWB10_RS27460 () | 8476..9542 | + | 1067 | Protein_11 | hypothetical protein | VF |
| AWB10_RS27465 () | 9542..9979 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| AWB10_RS27470 () | 9993..11675 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| AWB10_RS27475 () | 11668..12963 | + | 1296 | WP_012783946.1 | type 4b pilus protein PilO2 | - |
| AWB10_RS27480 () | 12950..13402 | + | 453 | WP_012783945.1 | hypothetical protein | VF |
| AWB10_RS27485 () | 13413..14966 | + | 1554 | WP_001492932.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| AWB10_RS27490 () | 14979..16076 | + | 1098 | WP_001492931.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| AWB10_RS27495 () | 16094..16708 | + | 615 | WP_001542527.1 | hypothetical protein | VF |
| AWB10_RS27500 () | 16718..17278 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| AWB10_RS27505 () | 17263..17919 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| AWB10_RS27510 () | 17919..19289 | + | 1371 | WP_001393542.1 | hypothetical protein | VF |
| AWB10_RS29110 () | 19876..20073 | + | 198 | WP_032159596.1 | hypothetical protein | - |
| AWB10_RS27525 () | 20070..20318 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| AWB10_RS29115 () | 20367..20492 | - | 126 | Protein_24 | prepilin, shufflon protein A | - |
| AWB10_RS27530 () | 20476..21630 | + | 1155 | WP_001139955.1 | integrase | - |
| AWB10_RS27535 () | 21781..22605 | + | 825 | WP_001238932.1 | conjugal transfer protein TraE | - |
| AWB10_RS27540 () | 22691..23893 | + | 1203 | WP_086528365.1 | conjugal transfer protein TraF | - |
| AWB10_RS27545 () | 23953..24537 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| AWB10_RS27550 () | 24931..25389 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| AWB10_RS27555 () | 25386..26204 | + | 819 | WP_000646097.1 | hypothetical protein | VF |
| AWB10_RS27560 () | 26201..27349 | + | 1149 | WP_001024971.1 | putative protein YggR | VF |
| AWB10_RS27565 () | 27346..27636 | + | 291 | WP_001314267.1 | hypothetical protein | - |
| AWB10_RS27570 () | 27651..28202 | + | 552 | WP_012783942.1 | Phospholipase D | VF |
| AWB10_RS27575 () | 28292..32059 | + | 3768 | WP_012783940.1 | SogL protein | - |
| AWB10_RS27580 () | 32077..32424 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| AWB10_RS27585 () | 32421..33113 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| AWB10_RS27590 () | 33124..34107 | + | 984 | WP_001191880.1 | hypothetical protein | VF |
| AWB10_RS27595 () | 34110..35399 | + | 1290 | WP_011264042.1 | conjugal transfer protein TraO | - |
| AWB10_RS27600 () | 35399..36103 | + | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| AWB10_RS27605 () | 36103..36630 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| AWB10_RS27610 () | 36681..37085 | + | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| AWB10_RS27615 () | 37149..37337 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| AWB10_RS27620 () | 37321..38121 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| AWB10_RS27625 () | 38211..41255 | + | 3045 | WP_012783939.1 | IncI1-type conjugal transfer protein TraU | - |
| AWB10_RS27630 () | 41255..41869 | + | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| AWB10_RS27635 () | 41836..43038 | + | 1203 | WP_012783938.1 | IncI1-type conjugal transfer protein TraW | - |
| AWB10_RS27640 () | 43067..43651 | + | 585 | WP_012783937.1 | conjugal transfer protein TraX | - |
| AWB10_RS27645 () | 43748..45916 | + | 2169 | WP_015508354.1 | DotA/TraY family protein | - |
| AWB10_RS27650 () | 45987..46649 | + | 663 | WP_012783935.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| AWB10_RS27655 () | 46721..46930 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| AWB10_RS29120 () | 47322..47498 | + | 177 | WP_001054900.1 | hypothetical protein | - |
| AWB10_RS27660 () | 47563..47859 | - | 297 | WP_011264046.1 | hypothetical protein | - |
| AWB10_RS27665 () | 48159..48410 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| AWB10_RS27670 () | 48482..48634 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - () | 48686..48746 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 48686..48746 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 48686..48746 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 48686..48746 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| AWB10_RS27675 () | 48949..50040 | + | 1092 | WP_000426061.1 | hypothetical protein | - |
| - () | 50110..50167 | + | 58 | NuclAT_1 | - | - |
| - () | 50110..50167 | + | 58 | NuclAT_1 | - | - |
| - () | 50110..50167 | + | 58 | NuclAT_1 | - | - |
| - () | 50110..50167 | + | 58 | NuclAT_1 | - | - |
| AWB10_RS27680 () | 50347..51555 | + | 1209 | WP_001703845.1 | IncI1-type conjugal transfer protein TrbA | - |
| AWB10_RS27685 () | 51574..52644 | + | 1071 | WP_012783932.1 | IncI1-type conjugal transfer protein TrbB | - |
| AWB10_RS27690 () | 52637..54928 | + | 2292 | WP_012783931.1 | hypothetical protein | - |
| AWB10_RS27695 () | 54965..57664 | - | 2700 | WP_012783930.1 | Protein TraI | Relaxase |
| AWB10_RS27700 () | 57675..58007 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| AWB10_RS27705 () | 58241..58576 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| AWB10_RS27710 () | 58662..59510 | - | 849 | WP_001077023.1 | DUF4942 domain-containing protein | - |
| AWB10_RS29125 () | 59859..60056 | + | 198 | WP_001161115.1 | hypothetical protein | - |
| AWB10_RS27725 () | 60090..60341 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| AWB10_RS27730 () | 60372..60569 | - | 198 | WP_001348086.1 | hypothetical protein | - |
| AWB10_RS27735 () | 60592..61506 | - | 915 | WP_000038401.1 | Recombination-promoting nuclease RpnA | VF |
| AWB10_RS27740 () | 61571..61837 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| AWB10_RS27745 () | 61931..62365 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| AWB10_RS27760 () | 63094..63594 | - | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| AWB10_RS27770 () | 64056..64652 | - | 597 | WP_062864422.1 | hypothetical protein | - |
| AWB10_RS27775 () | 64649..65368 | - | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| AWB10_RS27780 () | 65365..65799 | - | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| AWB10_RS27785 () | 65854..67812 | - | 1959 | WP_112924451.1 | ParB/RepB/Spo0J family partition protein | - |
| AWB10_RS27790 () | 67871..68104 | - | 234 | WP_000006021.1 | DUF905 domain-containing protein | - |
| AWB10_RS27795 () | 68162..68689 | - | 528 | WP_001276107.1 | single-stranded DNA-binding protein | - |
| AWB10_RS27810 () | 69856..71523 | + | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| AWB10_RS27825 () | 71801..71992 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| AWB10_RS27830 () | 71989..72411 | - | 423 | WP_000271744.1 | DUF1380 family protein | - |
| AWB10_RS27835 () | 72458..72760 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| AWB10_RS29130 () | 73295..74065 | - | 771 | WP_179191425.1 | hypothetical protein | - |
| AWB10_RS27850 () | 74110..74544 | - | 435 | WP_000274484.1 | DUF1380 family protein | - |
| AWB10_RS27855 () | 74558..74779 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| AWB10_RS27860 () | 74780..75463 | - | 684 | WP_000086127.1 | DNA methylase | - |
| AWB10_RS27865 () | 75539..75850 | - | 312 | WP_033863049.1 | hypothetical protein | - |
| AWB10_RS27870 () | 75854..76276 | - | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| AWB10_RS27875 () | 76279..77259 | - | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| AWB10_RS27880 () | 77597..77932 | + | 336 | WP_001340323.1 | hypothetical protein | - |
| AWB10_RS27885 () | 78027..78929 | - | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| AWB10_RS27895 () | 79347..79595 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| AWB10_RS27900 () | 79592..80029 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AWB10_RS27905 () | 80029..81300 | + | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| AWB10_RS27910 () | 81504..82130 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| AWB10_RS29135 () | 82127..82429 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| AWB10_RS27925 () | 82936..84282 | - | 1347 | WP_001703911.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|