MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 48172 bp
Accession: NZ_CP020497 Location: 1..48172 Organism: Escherichia coli strain 103 Replicon: plasmid unnamed2
Accession: NZ_CP020497 Location: 1..48172 Organism: Escherichia coli strain 103 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPA47_RS26255 () | 7..198 | + | 192 | WP_016240769.1 | hypothetical protein | - |
| CPA47_RS26260 () | 200..409 | + | 210 | WP_016240770.1 | hypothetical protein | - |
| CPA47_RS26265 () | 406..813 | + | 408 | WP_097509654.1 | hypothetical protein | - |
| CPA47_RS26275 () | 1199..1594 | + | 396 | WP_001271967.1 | phage holin family protein | - |
| CPA47_RS26280 () | 1581..1877 | + | 297 | WP_000254764.1 | phage holin family protein | - |
| CPA47_RS26285 () | 1861..2406 | + | 546 | WP_024180651.1 | glycoside hydrolase family 108 protein | - |
| CPA47_RS26290 () | 2403..2681 | + | 279 | WP_023908959.1 | hypothetical protein | - |
| CPA47_RS26300 () | 3359..3946 | + | 588 | WP_135092932.1 | S-adenosylmethionine-binding protein | - |
| CPA47_RS26305 () | 4058..4327 | + | 270 | WP_000867916.1 | hypothetical protein | - |
| CPA47_RS26310 () | 4327..4524 | + | 198 | WP_001222808.1 | hypothetical protein | - |
| CPA47_RS26315 () | 4598..4897 | + | 300 | WP_001141358.1 | hypothetical protein | - |
| CPA47_RS26810 () | 5084..5236 | + | 153 | WP_004105298.1 | hypothetical protein | - |
| CPA47_RS26325 () | 5285..5695 | + | 411 | Protein_13 | hypothetical protein | - |
| CPA47_RS26330 () | 5930..6553 | + | 624 | WP_023908957.1 | ParB/Srx family N-terminal domain-containing protein | - |
| CPA47_RS26335 () | 6553..7926 | + | 1374 | WP_004105305.1 | ParB N-terminal domain-containing protein | - |
| CPA47_RS26340 () | 7967..8662 | + | 696 | WP_001705017.1 | hypothetical protein | - |
| CPA47_RS26345 () | 9220..9810 | + | 591 | WP_001185429.1 | ParB/Srx family N-terminal domain-containing protein | - |
| CPA47_RS26350 () | 9810..10361 | + | 552 | WP_135092933.1 | hypothetical protein | - |
| CPA47_RS26355 () | 10367..12223 | + | 1857 | WP_001406385.1 | phage terminase large subunit family protein | - |
| CPA47_RS26360 () | 12235..12474 | + | 240 | WP_001058287.1 | hypothetical protein | - |
| CPA47_RS26365 () | 12471..14045 | + | 1575 | WP_001022885.1 | phage portal protein | - |
| CPA47_RS26370 () | 14038..15102 | + | 1065 | WP_181020442.1 | Clp protease ClpP | - |
| CPA47_RS26375 () | 15112..15495 | + | 384 | WP_050015670.1 | hypothetical protein | - |
| CPA47_RS26380 () | 15516..16559 | + | 1044 | WP_050015672.1 | major capsid protein | - |
| CPA47_RS26385 () | 16560..16952 | + | 393 | WP_171846853.1 | hypothetical protein | - |
| CPA47_RS26390 () | 16952..17296 | + | 345 | WP_050015674.1 | sugar transporter | - |
| CPA47_RS26395 () | 17293..17778 | + | 486 | WP_050015676.1 | hypothetical protein | - |
| CPA47_RS26400 () | 17779..18069 | + | 291 | WP_001284546.1 | hypothetical protein | - |
| CPA47_RS26405 () | 18069..19532 | + | 1464 | WP_000542268.1 | phage tail protein | - |
| CPA47_RS26410 () | 19549..20070 | + | 522 | WP_004105328.1 | phage major tail tube protein | - |
| CPA47_RS26415 () | 20080..20361 | + | 282 | WP_000450805.1 | phage tail assembly protein | - |
| CPA47_RS26420 () | 20516..23308 | + | 2793 | WP_135092934.1 | phage tail tape measure protein | - |
| CPA47_RS26430 () | 23509..24510 | + | 1002 | WP_050015686.1 | late control D family protein | - |
| CPA47_RS26435 () | 24513..25133 | + | 621 | WP_050015688.1 | phage baseplate assembly protein V | - |
| CPA47_RS26440 () | 25130..25597 | + | 468 | WP_050015690.1 | phage tail protein | - |
| CPA47_RS26445 () | 25594..25914 | + | 321 | WP_001406393.1 | hypothetical protein | - |
| CPA47_RS26450 () | 25911..27035 | + | 1125 | WP_104122895.1 | baseplate J/gp47 family protein | - |
| CPA47_RS26455 () | 27028..27609 | + | 582 | WP_072019928.1 | phage tail protein I | - |
| CPA47_RS26460 () | 27640..30018 | + | 2379 | WP_167577991.1 | tail fiber protein | - |
| CPA47_RS26465 () | 30018..30296 | + | 279 | WP_050015643.1 | hypothetical protein | - |
| CPA47_RS26900 () | 30744..31346 | + | 603 | Protein_41 | phage tail protein | - |
| CPA47_RS26475 () | 31348..31875 | + | 528 | WP_050015645.1 | tail fiber assembly protein | - |
| CPA47_RS26480 () | 32227..33063 | + | 837 | WP_001139597.1 | hypothetical protein | - |
| CPA47_RS26485 () | 33707..33994 | + | 288 | WP_000356589.1 | hypothetical protein | - |
| CPA47_RS26490 () | 34018..34281 | + | 264 | WP_000424604.1 | hypothetical protein | - |
| CPA47_RS26495 () | 34526..34873 | + | 348 | WP_000269912.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CPA47_RS26500 () | 34873..35172 | + | 300 | WP_001259436.1 | XRE family transcriptional regulator | Antitoxin Detail |
| CPA47_RS26505 () | 35336..35716 | + | 381 | WP_001523084.1 | hypothetical protein | - |
| CPA47_RS26510 () | 35820..36245 | - | 426 | WP_016240784.1 | hypothetical protein | - |
| CPA47_RS26515 () | 36347..36598 | + | 252 | WP_039052397.1 | helix-turn-helix domain-containing protein | - |
| CPA47_RS26520 () | 37254..37889 | + | 636 | WP_032154031.1 | hypothetical protein | - |
| CPA47_RS26525 () | 37924..39066 | - | 1143 | WP_032154032.1 | ORF6N domain-containing protein | - |
| CPA47_RS26530 () | 39063..39254 | - | 192 | WP_000183351.1 | hypothetical protein | - |
| CPA47_RS26535 () | 40364..40612 | - | 249 | WP_000730008.1 | hypothetical protein | - |
| CPA47_RS26540 () | 40656..41309 | - | 654 | WP_000156167.1 | ParA family protein | - |
| CPA47_RS26545 () | 41460..41834 | - | 375 | WP_097324697.1 | hypothetical protein | - |
| CPA47_RS26550 () | 41927..42583 | - | 657 | WP_000839976.1 | helix-turn-helix domain-containing protein | - |
| CPA47_RS26555 () | 42758..43252 | + | 495 | WP_001523091.1 | hypothetical protein | - |
| CPA47_RS26560 () | 43249..43764 | + | 516 | WP_108943738.1 | hypothetical protein | - |
| CPA47_RS26565 () | 43761..43994 | + | 234 | WP_000100624.1 | hypothetical protein | - |
| CPA47_RS26570 () | 43994..44398 | + | 405 | WP_001014473.1 | hypothetical protein | - |
| CPA47_RS26575 () | 44395..44727 | + | 333 | WP_001270825.1 | DUF1064 domain-containing protein | - |
| CPA47_RS26580 () | 44731..45107 | + | 377 | Protein_63 | hypothetical protein | - |
| CPA47_RS26585 () | 45277..46344 | + | 1068 | WP_024227027.1 | DUF3560 domain-containing protein | - |
| CPA47_RS26590 () | 46422..46703 | + | 282 | WP_000823235.1 | hypothetical protein | - |
| CPA47_RS26595 () | 46700..47065 | + | 366 | WP_001521425.1 | hypothetical protein | - |
| CPA47_RS26600 () | 47095..47253 | + | 159 | WP_001706266.1 | hypothetical protein | - |
| CPA47_RS26605 () | 47250..47942 | + | 693 | WP_104122896.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|