MGE detailed information
MGE type: Genomic_island MGE length: 45819 bp
Accession: NZ_CP020495 Location: 4630607..4676425 Organism: Escherichia coli strain 103 Replicon: chromosome
Accession: NZ_CP020495 Location: 4630607..4676425 Organism: Escherichia coli strain 103 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPA47_RS22950 () | 4626126..4627322 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| CPA47_RS22955 () | 4627607..4627888 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| CPA47_RS22960 () | 4627910..4628695 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| CPA47_RS22965 () | 4628756..4630273 | + | 1518 | WP_000997839.1 | propanediol utilization system aldehyde dehydrogenase GrpJ | - |
| CPA47_RS22970 () | 4630297..4630596 | + | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| CPA47_RS22975 () | 4630607..4631182 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| CPA47_RS22980 () | 4631231..4633783 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| CPA47_RS22985 () | 4633892..4634809 | + | 918 | WP_001564043.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| CPA47_RS22990 () | 4634946..4635851 | + | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| CPA47_RS23000 () | 4636463..4636832 | + | 370 | Protein_4404 | reverse transcriptase/maturase | - |
| CPA47_RS23005 () | 4636832..4637425 | + | 594 | Protein_4405 | maturase | - |
| CPA47_RS23015 () | 4637975..4639237 | + | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| CPA47_RS23020 () | 4639254..4640309 | + | 1056 | WP_001564046.1 | HTH-type transcriptional activator Btr | VF |
| CPA47_RS23025 () | 4640438..4641589 | + | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| CPA47_RS23030 () | 4641634..4642179 | + | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| CPA47_RS23035 () | 4642536..4642829 | - | 294 | Protein_4410 | helix-turn-helix domain-containing protein | - |
| CPA47_RS23040 () | 4642852..4643502 | - | 651 | WP_001564048.1 | TetR/AcrR family transcriptional regulator | - |
| CPA47_RS23045 () | 4643623..4644780 | - | 1158 | Protein_4412 | Multidrug resistance protein MexB | VF |
| CPA47_RS23050 () | 4644871..4645137 | + | 267 | Protein_4413 | IS3 family transposase IS2 | Transposase |
| CPA47_RS23055 () | 4645199..4645424 | - | 226 | Protein_4414 | hypothetical protein | - |
| CPA47_RS23060 () | 4645436..4645669 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| CPA47_RS23065 () | 4645738..4646313 | - | 576 | WP_001564054.1 | hypothetical protein | - |
| CPA47_RS23070 () | 4646571..4647137 | - | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| CPA47_RS23075 () | 4648483..4649577 | + | 1095 | WP_000370278.1 | sugar kinase | - |
| CPA47_RS23080 () | 4649596..4650846 | - | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| CPA47_RS23085 () | 4650930..4651865 | - | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| CPA47_RS23090 () | 4651858..4652793 | - | 936 | WP_000332862.1 | pseudouridine kinase | - |
| CPA47_RS23095 () | 4653329..4653781 | - | 453 | WP_000558152.1 | N-acetyltransferase | - |
| CPA47_RS23105 () | 4654302..4655033 | - | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| CPA47_RS23115 () | 4655703..4656233 | + | 531 | WP_000778605.1 | hypothetical protein | - |
| CPA47_RS23120 () | 4657396..4658619 | - | 1224 | WP_001107219.1 | hypothetical protein | - |
| CPA47_RS23130 () | 4658720..4659604 | + | 885 | WP_001116795.1 | 50S ribosome-binding GTPase | - |
| CPA47_RS23135 () | 4659807..4660487 | + | 681 | WP_029702103.1 | WYL domain-containing protein | - |
| CPA47_RS23140 () | 4660635..4661312 | + | 678 | WP_001097302.1 | hypothetical protein | - |
| CPA47_RS23145 () | 4661318..4661551 | + | 234 | WP_001278293.1 | DUF905 family protein | - |
| CPA47_RS23150 () | 4661641..4662459 | + | 819 | WP_001175165.1 | DUF945 domain-containing protein | - |
| CPA47_RS23155 () | 4662725..4663204 | + | 480 | WP_001564060.1 | antirestriction protein | - |
| CPA47_RS23160 () | 4663220..4663696 | + | 477 | WP_021553055.1 | RadC family protein | - |
| CPA47_RS23165 () | 4663761..4663982 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| CPA47_RS23170 () | 4664145..4664513 | + | 369 | WP_021553056.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CPA47_RS23175 () | 4664603..4664980 | + | 378 | WP_029701676.1 | TA system toxin CbtA family protein | Toxin Detail |
| CPA47_RS23180 () | 4664977..4665126 | + | 150 | Protein_4436 | hypothetical protein | - |
| CPA47_RS23185 () | 4665205..4665399 | + | 195 | WP_024181941.1 | DUF957 domain-containing protein | - |
| CPA47_RS23190 () | 4665484..4666326 | + | 843 | WP_022645115.1 | DUF4942 domain-containing protein | - |
| CPA47_RS23195 () | 4667075..4668613 | + | 1539 | WP_001187196.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| CPA47_RS23205 () | 4668978..4670312 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| CPA47_RS23210 () | 4670392..4672539 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| CPA47_RS23215 () | 4672598..4674055 | + | 1458 | WP_000856827.1 | dipeptide/tripeptide permease DtpC | - |
| CPA47_RS23220 () | 4674292..4675809 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| CPA47_RS23225 () | 4675928..4676101 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| CPA47_RS23230 () | 4676129..4676425 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| CPA47_RS23235 () | 4676654..4676926 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| CPA47_RS23240 () | 4676938..4677168 | - | 231 | WP_000373291.1 | (4Fe-4S)-binding protein | - |
| CPA47_RS23245 () | 4677349..4678980 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| CPA47_RS23250 () | 4678977..4679696 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|