MGE detailed information
MGE type: Genomic_island MGE length: 16545 bp
Accession: NZ_CP020495 Location: 4378317..4394861 Organism: Escherichia coli strain 103 Replicon: chromosome
Accession: NZ_CP020495 Location: 4378317..4394861 Organism: Escherichia coli strain 103 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPA47_RS21545 () | 4374848..4375573 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| CPA47_RS21550 () | 4375610..4376149 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| CPA47_RS21555 () | 4376214..4376762 | - | 549 | WP_000695557.1 | type 1 fimbrial major subunit FimA | - |
| CPA47_RS21560 () | 4377243..4377839 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| CPA47_RS21565 () | 4378317..4378919 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| CPA47_RS21570 () | 4380375..4381091 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| CPA47_RS21575 () | 4381111..4382217 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| CPA47_RS21580 () | 4382282..4383262 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| CPA47_RS21585 () | 4383845..4385085 | - | 1241 | Protein_4148 | helicase YjhR | - |
| CPA47_RS21590 () | 4385201..4385446 | + | 246 | Protein_4149 | GNAT family N-acetyltransferase | - |
| CPA47_RS21595 () | 4385823..4386080 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| CPA47_RS21600 () | 4386092..4386637 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| CPA47_RS21605 () | 4386693..4387439 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| CPA47_RS21610 () | 4387608..4387826 | + | 219 | Protein_4153 | hypothetical protein | - |
| CPA47_RS26870 () | 4387864..4387980 | + | 117 | Protein_4154 | VOC family protein | - |
| CPA47_RS21615 () | 4388225..4389346 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| CPA47_RS21620 () | 4389343..4389621 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| CPA47_RS21625 () | 4389633..4390946 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| CPA47_RS21630 () | 4390959..4391765 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| CPA47_RS21635 () | 4391896..4392327 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| CPA47_RS21640 () | 4392339..4392971 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| CPA47_RS21645 () | 4392988..4393770 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| CPA47_RS21650 () | 4394073..4394861 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| CPA47_RS21655 () | 4394866..4395771 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| CPA47_RS21660 () | 4395782..4397749 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| CPA47_RS21665 () | 4397856..4399205 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|