MGE detailed information
MGE type: Genomic_island MGE length: 10758 bp
Accession: NZ_CP020495 Location: 3983241..3993998 Organism: Escherichia coli strain 103 Replicon: chromosome
Accession: NZ_CP020495 Location: 3983241..3993998 Organism: Escherichia coli strain 103 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPA47_RS19705 () | 3978587..3979369 | - | 783 | WP_001521911.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| CPA47_RS19710 () | 3979685..3982894 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| CPA47_RS19715 () | 3983055..3983195 | + | 141 | WP_001308408.1 | ash family protein | - |
| CPA47_RS19720 () | 3983241..3983711 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| CPA47_RS26765 () | 3983708..3983810 | + | 103 | Protein_3785 | helix-turn-helix domain-containing protein | - |
| CPA47_RS26770 () | 3983902..3984060 | + | 159 | Protein_3786 | integrase | - |
| CPA47_RS19735 () | 3984265..3985518 | - | 1254 | WP_001521908.1 | glutamate-5-semialdehyde dehydrogenase | - |
| CPA47_RS19740 () | 3985530..3986633 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| CPA47_RS19745 () | 3986921..3987976 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| CPA47_RS19750 () | 3988015..3988416 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| CPA47_RS19755 () | 3988474..3989718 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 3989134..3989214 | - | 81 | NuclAT_11 | - | - |
| - () | 3989134..3989214 | - | 81 | NuclAT_11 | - | - |
| - () | 3989134..3989214 | - | 81 | NuclAT_11 | - | - |
| - () | 3989134..3989214 | - | 81 | NuclAT_11 | - | - |
| CPA47_RS19760 () | 3989810..3990268 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| CPA47_RS19765 () | 3990529..3991986 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| CPA47_RS26855 () | 3992043..3992395 | - | 353 | Protein_3794 | peptide chain release factor H | - |
| CPA47_RS19775 () | 3992391..3992597 | - | 207 | Protein_3795 | RtcB family protein | - |
| CPA47_RS19780 () | 3992842..3993294 | - | 453 | WP_023144376.1 | GNAT family N-acetyltransferase | - |
| CPA47_RS19785 () | 3993304..3993702 | - | 399 | WP_001521903.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| CPA47_RS19790 () | 3993705..3993998 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| CPA47_RS19795 () | 3994050..3995105 | - | 1056 | WP_001226177.1 | DNA polymerase IV | - |
| CPA47_RS19800 () | 3995176..3995961 | - | 786 | WP_000207556.1 | putative lateral flagellar export/assembly protein LafU | - |
| CPA47_RS19805 () | 3995933..3997645 | + | 1713 | Protein_3801 | flagellar biosynthesis protein FlhA | - |
| CPA47_RS19810 () | 3997724..3998077 | + | 354 | WP_024166466.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| CPA47_RS19815 () | 3998134..3998883 | - | 750 | WP_016233951.1 | C40 family peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|