MGE detailed information
MGE type: Prophage MGE length: 50645 bp
Accession: NZ_CP020495 Location: 2645108..2695752 Organism: Escherichia coli strain 103 Replicon: chromosome
Accession: NZ_CP020495 Location: 2645108..2695752 Organism: Escherichia coli strain 103 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPA47_RS13065 () | 2640424..2641251 | + | 828 | WP_029702064.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| CPA47_RS13070 () | 2641248..2642105 | + | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| CPA47_RS13075 () | 2642102..2642959 | + | 858 | WP_000968125.1 | iron/manganese ABC transporter permease subunit SitD | - |
| CPA47_RS13080 () | 2643432..2644226 | + | 795 | WP_000354607.1 | hypothetical protein | - |
| CPA47_RS13085 () | 2644351..2644502 | + | 152 | Protein_2526 | DinI-like family protein | - |
| CPA47_RS13090 () | 2644772..2645065 | - | 294 | WP_001405873.1 | hypothetical protein | - |
| CPA47_RS13095 () | 2645108..2646148 | - | 1041 | WP_001314683.1 | tail fiber domain-containing protein | - |
| CPA47_RS13100 () | 2646158..2646439 | - | 282 | WP_000654155.1 | hypothetical protein | - |
| CPA47_RS13105 () | 2646439..2648814 | - | 2376 | WP_042099016.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CPA47_RS13110 () | 2648879..2649478 | - | 600 | WP_001542091.1 | Outer membrane protein X | VF |
| CPA47_RS13115 () | 2649546..2653025 | - | 3480 | WP_021523093.1 | host specificity protein J | - |
| CPA47_RS13120 () | 2653086..2653688 | - | 603 | WP_049286672.1 | tail assembly protein | - |
| CPA47_RS13125 () | 2653625..2654368 | - | 744 | WP_032153655.1 | C40 family peptidase | - |
| CPA47_RS13130 () | 2654374..2655072 | - | 699 | WP_001551186.1 | phage minor tail protein L | - |
| CPA47_RS13135 () | 2655072..2655401 | - | 330 | WP_000847345.1 | phage tail protein | - |
| CPA47_RS13140 () | 2655398..2657959 | - | 2562 | WP_135092929.1 | phage tail tape measure protein | - |
| CPA47_RS13145 () | 2657952..2658386 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| CPA47_RS13150 () | 2658368..2658790 | - | 423 | WP_000479153.1 | phage minor tail protein G | - |
| CPA47_RS13155 () | 2658806..2659546 | - | 741 | WP_001349920.1 | phage tail protein | - |
| CPA47_RS13160 () | 2659554..2659949 | - | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| CPA47_RS13165 () | 2659946..2660524 | - | 579 | WP_000975070.1 | phage tail protein | - |
| CPA47_RS13170 () | 2660536..2660889 | - | 354 | WP_000752979.1 | head-tail joining protein | - |
| CPA47_RS13175 () | 2660901..2661299 | - | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| CPA47_RS13180 () | 2661341..2662366 | - | 1026 | WP_000063277.1 | major capsid protein | - |
| CPA47_RS13185 () | 2662421..2662753 | - | 333 | WP_001708751.1 | head decoration protein | - |
| CPA47_RS13190 () | 2662763..2664082 | - | 1320 | WP_020233915.1 | S49 family peptidase | - |
| CPA47_RS13195 () | 2664063..2665664 | - | 1602 | WP_001356819.1 | phage portal protein | - |
| CPA47_RS13200 () | 2665661..2665867 | - | 207 | WP_000198149.1 | gpW family protein | - |
| CPA47_RS13205 () | 2665864..2667789 | - | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| CPA47_RS13210 () | 2667764..2668309 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| CPA47_RS13215 () | 2668698..2668931 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| CPA47_RS13220 () | 2668989..2669399 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| CPA47_RS13225 () | 2669551..2669724 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| CPA47_RS13230 () | 2669896..2670051 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| CPA47_RS13235 () | 2670131..2670196 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| CPA47_RS13240 () | 2670199..2670387 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| CPA47_RS13245 () | 2670398..2670610 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| CPA47_RS13250 () | 2670973..2671470 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| CPA47_RS13255 () | 2671467..2672000 | - | 534 | WP_001092971.1 | lysozyme | - |
| CPA47_RS13260 () | 2671997..2672308 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| CPA47_RS13265 () | 2672313..2672528 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| CPA47_RS26990 () | 2672748..2672918 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| CPA47_RS13275 () | 2673085..2673543 | - | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| CPA47_RS13285 () | 2673994..2674209 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| CPA47_RS13290 () | 2674510..2674722 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| CPA47_RS13295 () | 2674777..2674866 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| CPA47_RS13300 () | 2675144..2675896 | - | 753 | WP_001047135.1 | antitermination protein | - |
| CPA47_RS13305 () | 2675910..2676959 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| CPA47_RS13310 () | 2676961..2677239 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| CPA47_RS13315 () | 2677306..2677557 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| CPA47_RS13320 () | 2677774..2677929 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CPA47_RS13325 () | 2678001..2678288 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| CPA47_RS13330 () | 2678288..2678527 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| CPA47_RS13335 () | 2678552..2678857 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| CPA47_RS13340 () | 2679060..2679392 | + | 333 | WP_001301033.1 | protein FlxA | - |
| CPA47_RS13345 () | 2679829..2681142 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| CPA47_RS13350 () | 2681626..2682654 | - | 1029 | WP_001345551.1 | DUF4868 domain-containing protein | - |
| CPA47_RS13355 () | 2682651..2683265 | - | 615 | WP_001265627.1 | hypothetical protein | - |
| CPA47_RS13360 () | 2683474..2684139 | - | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| CPA47_RS13365 () | 2684342..2684740 | - | 399 | WP_001151242.1 | DUF977 family protein | - |
| CPA47_RS13370 () | 2684781..2685746 | - | 966 | WP_000054487.1 | hypothetical protein | - |
| CPA47_RS13375 () | 2685727..2686248 | - | 522 | WP_000705355.1 | hypothetical protein | - |
| CPA47_RS13380 () | 2686232..2686459 | - | 228 | WP_000921596.1 | transcriptional regulator | - |
| CPA47_RS13385 () | 2686540..2686947 | + | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| CPA47_RS13390 () | 2687116..2687271 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| CPA47_RS13395 () | 2687273..2687848 | + | 576 | WP_000344950.1 | hypothetical protein | - |
| CPA47_RS13400 () | 2688335..2688523 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| CPA47_RS13405 () | 2688520..2688711 | + | 192 | WP_001083276.1 | lysis protein YdfD | - |
| CPA47_RS13410 () | 2688805..2691276 | + | 2472 | WP_000048363.1 | exonuclease | - |
| CPA47_RS13415 () | 2691349..2691600 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| CPA47_RS13425 () | 2691671..2692348 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| CPA47_RS13430 () | 2692348..2692695 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CPA47_RS13435 () | 2692715..2694286 | + | 1572 | WP_029392005.1 | IS66 family transposase ISCro1 | Transposase |
| CPA47_RS13440 () | 2694342..2695622 | + | 1281 | WP_021523105.1 | Putative defective protein IntQ ; Integrase | Integrase |
| CPA47_RS13450 () | 2695810..2696829 | - | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| CPA47_RS13455 () | 2696841..2698055 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| CPA47_RS13460 () | 2698261..2698587 | - | 327 | WP_001314753.1 | YnfA family protein | - |
| CPA47_RS13465 () | 2698721..2699062 | + | 342 | WP_000705205.1 | DUF1283 family protein | - |
| CPA47_RS13470 () | 2699097..2699657 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| CPA47_RS13475 () | 2699660..2700370 | - | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|