MGE detailed information
MGE type: Prophage MGE length: 71276 bp
Accession: NZ_CP020467 Location: 2060529..2131804 Organism: Staphylococcus aureus strain CFSAN007896 Replicon: chromosome
Accession: NZ_CP020467 Location: 2060529..2131804 Organism: Staphylococcus aureus strain CFSAN007896 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB477_RS10430 () | 2056067..2056747 | - | 681 | WP_000645732.1 | phenol-soluble modulin export ABC transporter permease subunit PmtB | - |
| AB477_RS10435 () | 2056748..2057644 | - | 897 | WP_000991315.1 | phenol-soluble modulin export ABC transporter ATP-binding protein PmtA | - |
| AB477_RS10440 () | 2057641..2058021 | - | 381 | WP_000691584.1 | GntR family transcriptional regulator | - |
| AB477_RS10445 () | 2058279..2058455 | - | 177 | WP_000681966.1 | hypothetical protein | - |
| AB477_RS10450 () | 2058697..2058795 | - | 99 | WP_000990056.1 | hypothetical protein | - |
| AB477_RS10455 () | 2058995..2060281 | + | 1287 | WP_001068528.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| AB477_RS10460 () | 2060529..2062148 | - | 1620 | WP_107375185.1 | IS1182 family transposase | - |
| AB477_RS10465 () | 2062446..2064515 | - | 2070 | WP_000669728.1 | extracellular adherence protein Eap/Map | - |
| AB477_RS10470 () | 2064901..2065151 | + | 251 | Protein_1945 | sphingomyelin phosphodiesterase | - |
| AB477_RS10475 () | 2065473..2065652 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| AB477_RS10485 () | 2065963..2066223 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| AB477_RS10490 () | 2066276..2066626 | - | 351 | WP_000702263.1 | complement inhibitor SCIN-A | - |
| AB477_RS10495 () | 2067311..2067760 | + | 450 | WP_000727649.1 | chemotaxis-inhibiting protein CHIPS | - |
| AB477_RS10500 () | 2067855..2068190 | - | 336 | Protein_1950 | SH3 domain-containing protein | - |
| AB477_RS10510 () | 2068840..2069331 | - | 492 | WP_000919350.1 | staphylokinase | - |
| AB477_RS10515 () | 2069522..2070277 | - | 756 | WP_107375239.1 | CHAP domain-containing protein | - |
| AB477_RS10520 () | 2070289..2070543 | - | 255 | WP_000611512.1 | phage holin | - |
| AB477_RS10525 () | 2070595..2070702 | + | 108 | WP_001791821.1 | hypothetical protein | - |
| - () | 2070624..2070763 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2070624..2070763 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2070624..2070763 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2070624..2070763 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2070632..2070687 | + | 56 | - | - | Antitoxin Detail |
| AB477_RS10530 () | 2070755..2070931 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| AB477_RS10535 () | 2071081..2071377 | - | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| AB477_RS10540 () | 2071435..2071722 | - | 288 | WP_001040261.1 | hypothetical protein | - |
| AB477_RS10545 () | 2071769..2071921 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| AB477_RS10550 () | 2071911..2075696 | - | 3786 | WP_107375240.1 | hypothetical protein | - |
| AB477_RS10555 () | 2075712..2077196 | - | 1485 | WP_107375241.1 | phage tail family protein | - |
| AB477_RS10560 () | 2077193..2081722 | - | 4530 | WP_001644871.1 | phage tail tape measure protein | - |
| AB477_RS10565 () | 2081967..2082317 | - | 351 | WP_001096353.1 | hypothetical protein | - |
| AB477_RS10570 () | 2082367..2082672 | - | 306 | WP_100209307.1 | Ig-like domain-containing protein | - |
| AB477_RS10575 () | 2082633..2083274 | - | 642 | WP_000268737.1 | phage tail protein | - |
| AB477_RS10580 () | 2083275..2083682 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| AB477_RS10585 () | 2083679..2084083 | - | 405 | WP_000114341.1 | HK97 gp10 family phage protein | - |
| AB477_RS10590 () | 2084080..2084442 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| AB477_RS10595 () | 2084426..2084710 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| AB477_RS10600 () | 2084700..2084984 | - | 285 | WP_070992243.1 | hypothetical protein | - |
| AB477_RS10605 () | 2085004..2086149 | - | 1146 | WP_107375242.1 | phage major capsid protein | - |
| AB477_RS10610 () | 2086173..2086910 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
| AB477_RS10615 () | 2086894..2088081 | - | 1188 | WP_000025274.1 | phage portal protein | - |
| AB477_RS10620 () | 2088097..2089758 | - | 1662 | WP_000625088.1 | terminase large subunit | - |
| AB477_RS10625 () | 2089755..2090099 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| AB477_RS10630 () | 2090230..2090529 | - | 300 | WP_000988336.1 | HNH endonuclease | - |
| AB477_RS10635 () | 2090761..2091177 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| AB477_RS10640 () | 2091205..2091405 | - | 201 | WP_000265042.1 | DUF1514 family protein | - |
| AB477_RS10645 () | 2091405..2092055 | - | 651 | WP_001005262.1 | hypothetical protein | - |
| AB477_RS10650 () | 2092214..2092363 | - | 150 | WP_000237868.1 | transcriptional activator RinB | - |
| AB477_RS10655 () | 2092366..2092566 | - | 201 | WP_001125015.1 | hypothetical protein | - |
| AB477_RS10660 () | 2092541..2092729 | - | 189 | WP_000195782.1 | DUF1381 domain-containing protein | - |
| AB477_RS10665 () | 2092726..2092971 | - | 246 | WP_001282074.1 | hypothetical protein | - |
| AB477_RS10670 () | 2093008..2093517 | - | 510 | WP_000185636.1 | dUTP pyrophosphatase | - |
| AB477_RS10675 () | 2093510..2093758 | - | 249 | WP_001065065.1 | DUF1024 family protein | - |
| AB477_RS10680 () | 2093799..2094047 | - | 249 | WP_015994229.1 | hypothetical protein | - |
| AB477_RS10685 () | 2094056..2094256 | - | 201 | WP_000235325.1 | hypothetical protein | - |
| AB477_RS10690 () | 2094259..2094516 | - | 258 | WP_000022720.1 | DUF3310 domain-containing protein | - |
| AB477_RS10695 () | 2094516..2094887 | - | 372 | WP_001140291.1 | hypothetical protein | - |
| AB477_RS10700 () | 2094888..2095073 | - | 186 | WP_001187244.1 | DUF3113 family protein | - |
| AB477_RS10705 () | 2095078..2095482 | - | 405 | WP_015997090.1 | DUF1064 domain-containing protein | - |
| AB477_RS10710 () | 2095492..2095713 | - | 222 | WP_001123688.1 | DUF3269 family protein | - |
| AB477_RS10715 () | 2095726..2095884 | - | 159 | WP_000256597.1 | hypothetical protein | - |
| AB477_RS10720 () | 2095878..2096657 | - | 780 | WP_000803070.1 | ATP-binding protein | - |
| AB477_RS10725 () | 2096667..2097458 | - | 792 | WP_064289498.1 | phage replisome organizer N-terminal domain-containing protein | - |
| AB477_RS10730 () | 2097430..2098122 | - | 693 | WP_001644874.1 | hypothetical protein | - |
| AB477_RS10735 () | 2098135..2098686 | - | 552 | WP_000704705.1 | single-stranded DNA-binding protein | - |
| AB477_RS10740 () | 2098715..2099503 | - | 789 | WP_001644875.1 | ATP-binding protein | - |
| AB477_RS10745 () | 2099496..2099717 | - | 222 | WP_000815403.1 | DUF2483 family protein | - |
| AB477_RS10750 () | 2099727..2099987 | - | 261 | WP_001644876.1 | DUF1108 family protein | - |
| AB477_RS10755 () | 2099968..2100297 | - | 330 | WP_000138304.1 | hypothetical protein | - |
| AB477_RS10760 () | 2100387..2100548 | - | 162 | WP_000066017.1 | DUF1270 domain-containing protein | - |
| AB477_RS10765 () | 2100545..2100865 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| AB477_RS10770 () | 2100924..2101462 | + | 539 | Protein_2003 | hypothetical protein | - |
| AB477_RS10775 () | 2101486..2101746 | - | 261 | WP_000435341.1 | transcriptional regulator | - |
| AB477_RS10780 () | 2101759..2102001 | - | 243 | WP_000639923.1 | DUF739 family protein | - |
| AB477_RS10785 () | 2102165..2102881 | + | 717 | WP_001083975.1 | LexA family transcriptional regulator | - |
| AB477_RS10790 () | 2102893..2103747 | + | 855 | WP_001557601.1 | HIRAN domain-containing protein | - |
| AB477_RS14805 () | 2103821..2103967 | + | 147 | WP_000345949.1 | hypothetical protein | - |
| AB477_RS10795 () | 2103964..2104149 | + | 186 | WP_000100503.1 | hypothetical protein | - |
| AB477_RS10800 () | 2104349..2104531 | + | 183 | WP_000705240.1 | hypothetical protein | - |
| AB477_RS10805 () | 2104609..2105322 | + | 714 | WP_064128183.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| AB477_RS10810 () | 2105513..2106550 | + | 1038 | WP_000857198.1 | site-specific integrase | - |
| AB477_RS10815 () | 2106601..2107431 | + | 831 | Protein_2013 | sphingomyelin phosphodiesterase | - |
| AB477_RS10820 () | 2107688..2108707 | - | 1020 | WP_000595617.1 | leukocidin/hemolysin toxin family protein | - |
| AB477_RS10825 () | 2108729..2109784 | - | 1056 | WP_000791402.1 | leukocidin family pore-forming toxin | - |
| AB477_RS10830 () | 2110216..2111439 | + | 1224 | WP_000206618.1 | ArgE/DapE family deacylase | - |
| AB477_RS10835 () | 2111878..2113185 | + | 1308 | WP_001045073.1 | TrkH family potassium uptake protein | - |
| AB477_RS10845 () | 2113763..2114104 | - | 342 | WP_001573771.1 | hypothetical protein | - |
| AB477_RS10850 () | 2114094..2114390 | - | 297 | WP_001573769.1 | hypothetical protein | - |
| AB477_RS10855 () | 2114387..2114566 | - | 180 | WP_000201397.1 | hypothetical protein | - |
| AB477_RS10860 () | 2115685..2116620 | + | 936 | WP_001239269.1 | TDT family transporter | - |
| AB477_RS10870 () | 2117475..2117702 | - | 228 | WP_000812237.1 | hypothetical protein | - |
| AB477_RS10875 () | 2118121..2118825 | + | 705 | WP_107375243.1 | toxic shock syndrome toxin TSST-1 | - |
| AB477_RS10880 () | 2118980..2119549 | - | 570 | WP_001293073.1 | terminase small subunit | - |
| AB477_RS10885 () | 2119546..2119887 | - | 342 | WP_000358778.1 | hypothetical protein | - |
| AB477_RS10890 () | 2119890..2120417 | - | 528 | WP_000771368.1 | spore coat protein | - |
| AB477_RS10895 () | 2120468..2120686 | - | 219 | WP_000448775.1 | capsid morphogenesis B protein | - |
| AB477_RS10900 () | 2120704..2121282 | - | 579 | WP_000846285.1 | hypothetical protein | - |
| AB477_RS10905 () | 2121294..2121635 | - | 342 | WP_001190608.1 | hypothetical protein | - |
| AB477_RS10910 () | 2122171..2122812 | - | 642 | WP_001019766.1 | hypothetical protein | - |
| AB477_RS10915 () | 2122809..2123189 | - | 381 | WP_000356937.1 | hypothetical protein | - |
| AB477_RS10920 () | 2123501..2125210 | - | 1710 | WP_000447451.1 | DUF927 domain-containing protein | - |
| AB477_RS10925 () | 2125224..2126079 | - | 856 | Protein_2033 | primase alpha helix C-terminal domain-containing protein | - |
| AB477_RS10930 () | 2126143..2126460 | - | 318 | WP_001103930.1 | DUF1474 family protein | - |
| AB477_RS10935 () | 2126461..2126844 | - | 384 | WP_000403839.1 | hypothetical protein | - |
| AB477_RS10940 () | 2126846..2127049 | - | 204 | WP_001231378.1 | hypothetical protein | - |
| AB477_RS10945 () | 2127034..2127189 | - | 156 | WP_000708433.1 | hypothetical protein | - |
| AB477_RS10950 () | 2127186..2127503 | - | 318 | WP_000481967.1 | helix-turn-helix domain-containing protein | - |
| AB477_RS10955 () | 2127508..2127726 | - | 219 | WP_000153640.1 | helix-turn-helix transcriptional regulator | - |
| AB477_RS10960 () | 2127899..2128573 | + | 675 | WP_000620857.1 | helix-turn-helix transcriptional regulator | - |
| AB477_RS10965 () | 2128587..2129759 | + | 1173 | WP_000179345.1 | site-specific integrase | - |
| AB477_RS10970 () | 2129828..2131444 | - | 1617 | WP_107375244.1 | chaperonin GroEL | - |
| AB477_RS10975 () | 2131520..2131804 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| AB477_RS10980 () | 2131979..2132722 | + | 744 | WP_000197638.1 | CPBP family intramembrane metalloprotease | - |
| AB477_RS10985 () | 2132747..2134000 | - | 1254 | WP_061641392.1 | hypothetical protein | - |
| AB477_RS10990 () | 2134197..2134823 | + | 627 | WP_000522388.1 | nitroreductase family protein | - |
| AB477_RS10995 () | 2135184..2135969 | + | 786 | WP_000867948.1 | carbon-nitrogen family hydrolase | - |
| AB477_RS11000 () | 2136571..2136705 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|