MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 50369 bp
Accession: NZ_CP020374 Location: 1..50369 Organism: Shewanella khirikhana strain TH2012 Replicon: plasmid pSTH1
Accession: NZ_CP020374 Location: 1..50369 Organism: Shewanella khirikhana strain TH2012 Replicon: plasmid pSTH1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Location: 1022..2152 (1131 bp)
Type: Others
Protein ID: WP_126169612.1
Type: Others
Protein ID: WP_126169612.1
Location: 2163..2759 (597 bp)
Type: Others
Protein ID: WP_126169613.1
Type: Others
Protein ID: WP_126169613.1
Location: 2847..4382 (1536 bp)
Type: Others
Protein ID: WP_164551323.1
Type: Others
Protein ID: WP_164551323.1
Location: 4394..5425 (1032 bp)
Type: Others
Protein ID: WP_126169615.1
Type: Others
Protein ID: WP_126169615.1
Location: 5658..6023 (366 bp)
Type: Others
Protein ID: WP_126169667.1
Type: Others
Protein ID: WP_126169667.1
Location: 6032..6544 (513 bp)
Type: Others
Protein ID: WP_126169616.1
Type: Others
Protein ID: WP_126169616.1
Location: 6541..7506 (966 bp)
Type: Others
Protein ID: WP_126169617.1
Type: Others
Protein ID: WP_126169617.1
Location: 7518..8195 (678 bp)
Type: Others
Protein ID: WP_126169618.1
Type: Others
Protein ID: WP_126169618.1
Location: 8268..8522 (255 bp)
Type: Antitoxin
Protein ID: WP_126169619.1
Type: Antitoxin
Protein ID: WP_126169619.1
Location: 8522..8851 (330 bp)
Type: Toxin
Protein ID: WP_126169620.1
Type: Toxin
Protein ID: WP_126169620.1
Location: 8953..9948 (996 bp)
Type: Others
Protein ID: WP_126169621.1
Type: Others
Protein ID: WP_126169621.1
Location: 10011..10679 (669 bp)
Type: Others
Protein ID: WP_126169622.1
Type: Others
Protein ID: WP_126169622.1
Location: 11360..11851 (492 bp)
Type: Others
Protein ID: WP_126169669.1
Type: Others
Protein ID: WP_126169669.1
Location: 11876..12127 (252 bp)
Type: Others
Protein ID: WP_126169623.1
Type: Others
Protein ID: WP_126169623.1
Location: 12099..13007 (909 bp)
Type: Others
Protein ID: WP_126169624.1
Type: Others
Protein ID: WP_126169624.1
Location: 13838..15721 (1884 bp)
Type: Others
Protein ID: WP_126169627.1
Type: Others
Protein ID: WP_126169627.1
Location: 15818..16132 (315 bp)
Type: Others
Protein ID: WP_126169628.1
Type: Others
Protein ID: WP_126169628.1
Location: 16145..18199 (2055 bp)
Type: Others
Protein ID: WP_126169629.1
Type: Others
Protein ID: WP_126169629.1
Location: 18276..18461 (186 bp)
Type: Others
Protein ID: WP_126169630.1
Type: Others
Protein ID: WP_126169630.1
Location: 18454..19353 (900 bp)
Type: Others
Protein ID: Protein_23
Type: Others
Protein ID: Protein_23
Location: 21813..22283 (471 bp)
Type: Others
Protein ID: WP_126169631.1
Type: Others
Protein ID: WP_126169631.1
Location: 25437..25757 (321 bp)
Type: Others
Protein ID: WP_126169634.1
Type: Others
Protein ID: WP_126169634.1
Location: 25767..26492 (726 bp)
Type: Others
Protein ID: WP_126169635.1
Type: Others
Protein ID: WP_126169635.1
Location: 26489..26926 (438 bp)
Type: Others
Protein ID: WP_126169636.1
Type: Others
Protein ID: WP_126169636.1
Location: 31526..31756 (231 bp)
Type: Others
Protein ID: WP_126169645.1
Type: Others
Protein ID: WP_126169645.1
Location: 38084..38707 (624 bp)
Type: Others
Protein ID: WP_126169655.1
Type: Others
Protein ID: WP_126169655.1
Location: 38846..39031 (186 bp)
Type: Others
Protein ID: WP_126169656.1
Type: Others
Protein ID: WP_126169656.1
Location: 39630..40556 (927 bp)
Type: VF
Protein ID: WP_126169657.1
Type: VF
Protein ID: WP_126169657.1
Location: 40565..40888 (324 bp)
Type: Others
Protein ID: WP_126169658.1
Type: Others
Protein ID: WP_126169658.1
Location: 40901..41194 (294 bp)
Type: Others
Protein ID: WP_126169659.1
Type: Others
Protein ID: WP_126169659.1
Location: 41197..43632 (2436 bp)
Type: Others
Protein ID: WP_126169660.1
Type: Others
Protein ID: WP_126169660.1
Location: 43633..44406 (774 bp)
Type: Others
Protein ID: WP_126169661.1
Type: Others
Protein ID: WP_126169661.1
Location: 44417..45775 (1359 bp)
Type: Others
Protein ID: WP_126169662.1
Type: Others
Protein ID: WP_126169662.1
Location: 45783..46475 (693 bp)
Type: Others
Protein ID: WP_126169663.1
Type: Others
Protein ID: WP_126169663.1
Location: 46475..47329 (855 bp)
Type: Others
Protein ID: WP_126169664.1
Type: Others
Protein ID: WP_126169664.1
Location: 47334..47774 (441 bp)
Type: Others
Protein ID: WP_126169665.1
Type: Others
Protein ID: WP_126169665.1
Location: 47767..49068 (1302 bp)
Type: Others
Protein ID: WP_126169666.1
Type: Others
Protein ID: WP_126169666.1
Location: 49145..49888 (744 bp)
Type: Others
Protein ID: WP_126169671.1
Type: Others
Protein ID: WP_126169671.1
Location: 10866..11231 (366 bp)
Type: Others
Protein ID: WP_126169668.1
Type: Others
Protein ID: WP_126169668.1
Location: 13052..13435 (384 bp)
Type: Others
Protein ID: WP_126169625.1
Type: Others
Protein ID: WP_126169625.1
Location: 13446..13745 (300 bp)
Type: Others
Protein ID: WP_126169626.1
Type: Others
Protein ID: WP_126169626.1
Location: 22541..24694 (2154 bp)
Type: Relaxase
Protein ID: WP_126169632.1
Type: Relaxase
Protein ID: WP_126169632.1
Location: 24691..25080 (390 bp)
Type: Others
Protein ID: WP_126169633.1
Type: Others
Protein ID: WP_126169633.1
Location: 26950..27219 (270 bp)
Type: VF
Protein ID: WP_126169637.1
Type: VF
Protein ID: WP_126169637.1
Location: 27534..27926 (393 bp)
Type: Others
Protein ID: WP_126169639.1
Type: Others
Protein ID: WP_126169639.1
Location: 27954..28574 (621 bp)
Type: Transposase
Protein ID: WP_126169640.1
Type: Transposase
Protein ID: WP_126169640.1
Location: 28725..28931 (207 bp)
Type: Others
Protein ID: WP_126169641.1
Type: Others
Protein ID: WP_126169641.1
Location: 28937..30175 (1239 bp)
Type: Others
Protein ID: WP_126169642.1
Type: Others
Protein ID: WP_126169642.1
Location: 30207..30569 (363 bp)
Type: Others
Protein ID: WP_126169643.1
Type: Others
Protein ID: WP_126169643.1
Location: 30562..31254 (693 bp)
Type: Others
Protein ID: WP_126169644.1
Type: Others
Protein ID: WP_126169644.1
Location: 32191..32469 (279 bp)
Type: Others
Protein ID: WP_126169646.1
Type: Others
Protein ID: WP_126169646.1
Location: 32485..32670 (186 bp)
Type: Others
Protein ID: WP_126169647.1
Type: Others
Protein ID: WP_126169647.1
Location: 32751..33071 (321 bp)
Type: Others
Protein ID: WP_126169648.1
Type: Others
Protein ID: WP_126169648.1
Location: 33082..33291 (210 bp)
Type: Others
Protein ID: WP_126169649.1
Type: Others
Protein ID: WP_126169649.1
Location: 33304..33546 (243 bp)
Type: Others
Protein ID: WP_126169650.1
Type: Others
Protein ID: WP_126169650.1
Location: 33555..33785 (231 bp)
Type: Others
Protein ID: WP_126169651.1
Type: Others
Protein ID: WP_126169651.1
Location: 33860..34090 (231 bp)
Type: Others
Protein ID: WP_126169670.1
Type: Others
Protein ID: WP_126169670.1
Location: 34090..34785 (696 bp)
Type: Others
Protein ID: WP_126169652.1
Type: Others
Protein ID: WP_126169652.1
Location: 35454..36200 (747 bp)
Type: Others
Protein ID: WP_126169653.1
Type: Others
Protein ID: WP_126169653.1
Location: 36936..37457 (522 bp)
Type: Others
Protein ID: WP_126169654.1
Type: Others
Protein ID: WP_126169654.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| STH12_RS21075 () | 1022..2152 | + | 1131 | WP_126169612.1 | hypothetical protein | - |
| STH12_RS21080 () | 2163..2759 | + | 597 | WP_126169613.1 | hypothetical protein | - |
| STH12_RS21085 () | 2847..4382 | + | 1536 | WP_164551323.1 | Flp pilus assembly complex ATPase component TadA | - |
| STH12_RS21090 () | 4394..5425 | + | 1032 | WP_126169615.1 | hypothetical protein | - |
| STH12_RS21095 () | 5658..6023 | + | 366 | WP_126169667.1 | type II secretion system protein | - |
| STH12_RS21100 () | 6032..6544 | + | 513 | WP_126169616.1 | hypothetical protein | - |
| STH12_RS21105 () | 6541..7506 | + | 966 | WP_126169617.1 | hypothetical protein | - |
| STH12_RS21110 () | 7518..8195 | + | 678 | WP_126169618.1 | hypothetical protein | - |
| STH12_RS21115 () | 8268..8522 | + | 255 | WP_126169619.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| STH12_RS21120 () | 8522..8851 | + | 330 | WP_126169620.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| STH12_RS21125 () | 8953..9948 | + | 996 | WP_126169621.1 | trypsin-like serine protease | - |
| STH12_RS21130 () | 10011..10679 | + | 669 | WP_126169622.1 | hypothetical protein | - |
| STH12_RS21135 () | 10866..11231 | - | 366 | WP_126169668.1 | hypothetical protein | - |
| STH12_RS21140 () | 11360..11851 | + | 492 | WP_126169669.1 | conjugative transfer signal peptidase TraF | - |
| STH12_RS21145 () | 11876..12127 | + | 252 | WP_126169623.1 | hypothetical protein | - |
| STH12_RS21150 () | 12099..13007 | + | 909 | WP_126169624.1 | hypothetical protein | - |
| STH12_RS21155 () | 13052..13435 | - | 384 | WP_126169625.1 | DNA-binding protein | - |
| STH12_RS21160 () | 13446..13745 | - | 300 | WP_126169626.1 | type II toxin-antitoxin system HigB family toxin | - |
| STH12_RS21165 () | 13838..15721 | + | 1884 | WP_126169627.1 | type IV secretory system conjugative DNA transfer family protein | - |
| STH12_RS21170 () | 15818..16132 | + | 315 | WP_126169628.1 | single-stranded DNA-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
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Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| No matching records found | ||||||