MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP020368 Location: 4251527..4260878 Organism: Escherichia coli strain BLR(DE3) Replicon: chromosome
Accession: NZ_CP020368 Location: 4251527..4260878 Organism: Escherichia coli strain BLR(DE3) Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B5762_RS21830 () | 4248253..4248972 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| B5762_RS21835 () | 4248969..4250605 | - | 1637 | Protein_4003 | sensor histidine kinase | - |
| B5762_RS21840 () | 4250786..4251016 | + | 231 | WP_001070602.1 | (4Fe-4S)-binding protein | - |
| B5762_RS21845 () | 4251028..4251300 | + | 273 | WP_000405651.1 | N-acetyltransferase | - |
| B5762_RS21855 () | 4251527..4251823 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| B5762_RS21860 () | 4251851..4252024 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| B5762_RS21865 () | 4252143..4253660 | - | 1518 | WP_001295090.1 | lysine--tRNA ligase | - |
| B5762_RS21870 () | 4253897..4255354 | - | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| B5762_RS21875 () | 4255413..4257560 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| B5762_RS21880 () | 4257640..4258974 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| B5762_RS21890 () | 4259340..4260878 | - | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| B5762_RS21905 () | 4261677..4262252 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| B5762_RS21910 () | 4262289..4263986 | - | 1698 | WP_000068928.1 | protein-disulfide reductase DsbD | - |
| B5762_RS21915 () | 4263962..4264300 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| B5762_RS21920 () | 4264416..4265717 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.004 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.004 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.004 |