MGE detailed information
MGE type: Prophage MGE length: 24796 bp
Accession: NZ_CP020350 Location: 4406609..4431404 Organism: Pectobacterium brasiliense strain SX309 Replicon: chromosome
Accession: NZ_CP020350 Location: 4406609..4431404 Organism: Pectobacterium brasiliense strain SX309 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B5S52_RS19705 () | 4403613..4404605 | + | 993 | WP_039462861.1 | hypothetical protein | - |
| B5S52_RS19710 () | 4404615..4406591 | + | 1977 | Protein_3808 | VWA domain-containing protein | - |
| B5S52_RS19715 () | 4406609..4407276 | + | 668 | Protein_3809 | Vitamin B12 import ATP-binding protein BtuD | VF |
| B5S52_RS19720 () | 4407257..4408479 | + | 1223 | Protein_3810 | ABC transporter permease | - |
| B5S52_RS19725 () | 4408495..4409998 | + | 1504 | Protein_3811 | hypothetical protein | VF |
| B5S52_RS19730 () | 4410021..4410725 | + | 705 | WP_014913963.1 | hypothetical protein | - |
| B5S52_RS19735 () | 4410736..4411218 | + | 483 | WP_014913962.1 | hypothetical protein | - |
| B5S52_RS19740 () | 4411536..4412048 | - | 513 | WP_080164106.1 | AAA family ATPase | - |
| B5S52_RS19745 () | 4412096..4412371 | - | 276 | WP_080164107.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| B5S52_RS19750 () | 4412375..4412623 | - | 249 | WP_039345626.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| B5S52_RS19755 () | 4412806..4413923 | + | 1118 | Protein_3817 | IS3 family transposase | - |
| B5S52_RS19765 () | 4414404..4415351 | - | 948 | WP_080164109.1 | hypothetical protein | - |
| B5S52_RS19770 () | 4415509..4416749 | - | 1241 | Protein_3819 | hypothetical protein ; Integrase | Integrase |
| B5S52_RS19775 () | 4416994..4418715 | - | 1722 | WP_080164111.1 | ATP-binding protein | - |
| B5S52_RS19780 () | 4418715..4420010 | - | 1296 | WP_080164112.1 | SIR2 family protein | - |
| B5S52_RS19785 () | 4420201..4420524 | - | 324 | WP_080164114.1 | DNA-binding transcriptional regulator | - |
| B5S52_RS19790 () | 4421648..4422526 | + | 879 | WP_080164115.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| B5S52_RS19795 () | 4422529..4422729 | + | 201 | WP_080164117.1 | AlpA family transcriptional regulator | - |
| B5S52_RS19800 () | 4422726..4423262 | + | 537 | WP_080164118.1 | ash family protein | - |
| B5S52_RS19805 () | 4423255..4425291 | + | 2037 | WP_080164120.1 | AAA family ATPase | - |
| B5S52_RS19810 () | 4425566..4425886 | + | 321 | WP_080164121.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| B5S52_RS19815 () | 4425876..4426160 | + | 285 | WP_005971242.1 | helix-turn-helix domain-containing protein | - |
| B5S52_RS19820 () | 4426411..4427364 | - | 954 | WP_080164123.1 | hypothetical protein | - |
| B5S52_RS19825 () | 4427415..4428674 | - | 1260 | WP_080164124.1 | hypothetical protein ; Integrase | Integrase |
| B5S52_RS19835 () | 4429213..4430289 | - | 1077 | WP_080164126.1 | LPS export ABC transporter permease LptG | - |
| B5S52_RS19840 () | 4430289..4431404 | - | 1116 | WP_039510108.1 | LPS export ABC transporter permease LptF | - |
| B5S52_RS19845 () | 4431687..4433198 | + | 1512 | WP_010284628.1 | leucyl aminopeptidase | - |
| B5S52_RS19850 () | 4433326..4433775 | + | 450 | WP_005973664.1 | DNA polymerase III subunit chi | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|