MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 14280 bp
Accession: NZ_CP020350 Location: 4274052..4288331 Organism: Pectobacterium brasiliense strain SX309 Replicon: chromosome
Accession: NZ_CP020350 Location: 4274052..4288331 Organism: Pectobacterium brasiliense strain SX309 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B5S52_RS19100 () | 4269575..4269907 | + | 333 | WP_080164047.1 | divalent cation tolerance protein CutA | - |
| B5S52_RS19105 () | 4269883..4271613 | + | 1731 | WP_080164048.1 | protein-disulfide reductase DsbD | - |
| B5S52_RS19110 () | 4271777..4272352 | + | 576 | WP_014914059.1 | transcriptional regulator | - |
| B5S52_RS19115 () | 4272349..4272939 | - | 591 | WP_080164050.1 | LysE family translocator | - |
| B5S52_RS19120 () | 4272975..4273820 | - | 846 | WP_080164052.1 | AraC family transcriptional regulator | - |
| B5S52_RS19130 () | 4274230..4275489 | + | 1260 | WP_039302994.1 | hypothetical protein ; Integrase | Integrase |
| B5S52_RS19135 () | 4275584..4275778 | - | 195 | WP_012773549.1 | DUF3950 domain-containing protein | - |
| B5S52_RS19140 () | 4275964..4276305 | + | 342 | WP_039302990.1 | hypothetical protein | - |
| B5S52_RS19150 () | 4277208..4277951 | + | 744 | WP_039308950.1 | hypothetical protein | - |
| B5S52_RS19155 () | 4278010..4278228 | + | 219 | WP_039308948.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| B5S52_RS19160 () | 4278231..4278536 | + | 306 | WP_039308945.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| B5S52_RS19165 () | 4278924..4279463 | + | 540 | WP_039308942.1 | SLATT domain-containing protein | - |
| B5S52_RS19170 () | 4279456..4280829 | + | 1374 | WP_039308940.1 | reverse transcriptase | - |
| B5S52_RS19175 () | 4280995..4282368 | - | 1374 | WP_039308937.1 | deoxyguanosinetriphosphate triphosphohydrolase family protein | - |
| B5S52_RS19180 () | 4282840..4283409 | + | 570 | WP_197061602.1 | DNA adenine methylase | - |
| B5S52_RS19185 () | 4283406..4284251 | + | 846 | WP_039308933.1 | 8-oxoguanine DNA glycosylase | - |
| B5S52_RS19190 () | 4284195..4284878 | - | 684 | WP_080164053.1 | dehydrogenase | - |
| B5S52_RS19195 () | 4284847..4285452 | - | 606 | WP_039308929.1 | 7-cyano-7-deazaguanine synthase | - |
| B5S52_RS19200 () | 4285449..4286711 | - | 1263 | WP_080164055.1 | nucleoside 2-deoxyribosyltransferase | - |
| B5S52_RS19205 () | 4286708..4287043 | - | 336 | WP_039308927.1 | hypothetical protein | - |
| B5S52_RS19210 () | 4287607..4287867 | + | 261 | WP_131526239.1 | IS3 family transposase ISEal1 | Transposase |
| B5S52_RS19215 () | 4288416..4288658 | - | 243 | WP_080164056.1 | helix-turn-helix domain-containing protein | - |
| B5S52_RS19220 () | 4288779..4289039 | + | 261 | WP_080164058.1 | helix-turn-helix domain-containing protein | - |
| B5S52_RS19225 () | 4289142..4289408 | + | 267 | WP_080164060.1 | helix-turn-helix domain-containing protein | - |
| B5S52_RS22690 () | 4289827..4290417 | + | 591 | WP_167375493.1 | hypothetical protein | - |
| B5S52_RS19235 () | 4290401..4291354 | + | 954 | WP_205939773.1 | DUF4868 domain-containing protein | - |
| B5S52_RS19240 () | 4291493..4293214 | - | 1722 | WP_080164063.1 | DUF87 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|