MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 9745 bp
Accession: NZ_CP020350 Location: 3847091..3856835 Organism: Pectobacterium brasiliense strain SX309 Replicon: chromosome
Accession: NZ_CP020350 Location: 3847091..3856835 Organism: Pectobacterium brasiliense strain SX309 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B5S52_RS17175 () | 3842686..3844137 | + | 1452 | WP_039502704.1 | L-asparagine permease | - |
| B5S52_RS17180 () | 3844204..3846357 | - | 2154 | WP_080163914.1 | ornithine decarboxylase | - |
| B5S52_RS17190 () | 3847269..3848528 | + | 1260 | WP_080163915.1 | hypothetical protein ; Integrase | Integrase |
| B5S52_RS17195 () | 3848635..3848829 | - | 195 | WP_080163917.1 | DUF3950 domain-containing protein | - |
| B5S52_RS17200 () | 3849015..3849356 | + | 342 | WP_039309297.1 | hypothetical protein | - |
| B5S52_RS22485 () | 3849948..3850118 | - | 171 | WP_155121810.1 | hypothetical protein | - |
| B5S52_RS17210 () | 3850260..3851003 | + | 744 | WP_080163920.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| B5S52_RS17215 () | 3851062..3851280 | + | 219 | WP_012773205.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| B5S52_RS17220 () | 3851283..3851555 | + | 273 | WP_080163922.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| B5S52_RS17225 () | 3851619..3852769 | + | 1151 | WP_155121799.1 | IS3 family transposase ISEal1 | Transposase |
| B5S52_RS17230 () | 3853036..3853392 | + | 357 | WP_080163924.1 | hypothetical protein | - |
| B5S52_RS17235 () | 3853521..3856178 | + | 2658 | WP_080163925.1 | hypothetical protein | - |
| B5S52_RS17240 () | 3856871..3858187 | - | 1317 | WP_080163927.1 | IS4 family transposase | - |
| B5S52_RS17245 () | 3858465..3858683 | + | 219 | WP_080163928.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| B5S52_RS17250 () | 3859101..3859466 | - | 366 | WP_014914374.1 | cyanovirin containing protein | - |
| B5S52_RS17255 () | 3859955..3860713 | + | 759 | Protein_3333 | transposase | - |
| B5S52_RS17260 () | 3860835..3861335 | - | 501 | WP_014914371.1 | serine acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|