MGE detailed information
MGE type: IScluster/Tn MGE length: 35102 bp
Accession: NZ_CP020343 Location: 32100..67201 Organism: Shigella flexneri 1a strain 0439 Replicon: plasmid unnamed1
Accession: NZ_CP020343 Location: 32100..67201 Organism: Shigella flexneri 1a strain 0439 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BS647_RS25645 (BS647_25755) | 28171..29151 | + | 981 | WP_000431558.1 | ParB family protein | - |
| BS647_RS25650 (BS647_25760) | 29407..29892 | + | 486 | WP_025760655.1 | IS110 family transposase | - |
| BS647_RS25655 (BS647_25765) | 29919..30098 | - | 180 | Protein_42 | transposase domain-containing protein | - |
| BS647_RS25660 (BS647_25770) | 30181..31308 | - | 1128 | WP_014526552.1 | group II intron reverse transcriptase/maturase | - |
| BS647_RS28655 | 31230..31568 | + | 339 | WP_227804374.1 | hypothetical protein | - |
| BS647_RS25670 (BS647_25780) | 31884..32063 | - | 180 | Protein_45 | IS66 family transposase | - |
| BS647_RS25675 (BS647_25785) | 32100..33309 | - | 1210 | Protein_46 | IS3 family transposase | - |
| BS647_RS25680 | 33366..33662 | - | 297 | Protein_47 | IS3 family transposase IS150 | Transposase |
| BS647_RS25685 (BS647_25795) | 33778..33966 | + | 189 | WP_000957853.1 | hypothetical protein | - |
| BS647_RS25690 (BS647_25800) | 33976..35174 | + | 1199 | WP_094081567.1 | IS91 family transposase ISSbo1 | Transposase |
| BS647_RS25695 (BS647_25805) | 35347..36101 | - | 755 | Protein_50 | IS3 family transposase IS150 | Transposase |
| BS647_RS25700 (BS647_25810) | 36112..36471 | + | 360 | Protein_51 | IS21 family transposase IS100 | Transposase |
| BS647_RS25705 (BS647_25815) | 36464..37252 | - | 789 | WP_005116773.1 | AraC family invasion system transcriptional regulator VirF | - |
| BS647_RS25710 (BS647_25820) | 37681..38082 | + | 402 | Protein_53 | integrase core domain-containing protein | - |
| BS647_RS25715 (BS647_25825) | 38264..38530 | + | 267 | WP_000957712.1 | hypothetical protein | VF |
| BS647_RS25720 (BS647_25830) | 38720..39417 | + | 698 | WP_227804301.1 | IS1 family transposase IS1X2 | Transposase |
| BS647_RS25725 (BS647_25835) | 39678..40874 | - | 1197 | WP_005085088.1 | IS110 family transposase ISSfl4 | Transposase |
| BS647_RS25730 (BS647_25840) | 41210..42901 | + | 1692 | WP_000597733.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| BS647_RS25735 (BS647_25845) | 42953..44161 | + | 1209 | Protein_58 | IS3 family transposase | - |
| BS647_RS25740 (BS647_25850) | 44204..44727 | - | 524 | Protein_59 | IS3 family transposase ISSfl11 | Transposase |
| BS647_RS25745 (BS647_25855) | 44795..45277 | - | 483 | WP_000405245.1 | GNAT family N-acetyltransferase | Toxin Detail |
| BS647_RS25750 (BS647_25860) | 45268..45570 | - | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| BS647_RS25760 (BS647_25870) | 45842..46114 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| BS647_RS25765 (BS647_25875) | 46095..47303 | + | 1209 | WP_000198552.1 | IS91 family transposase ISSbo1 | Transposase |
| BS647_RS28020 | 47475..47603 | + | 129 | Protein_64 | IS5/IS1182 family transposase | - |
| BS647_RS25775 (BS647_25885) | 47752..49206 | - | 1455 | WP_000701108.1 | hypothetical protein | VF |
| BS647_RS25780 (BS647_25890) | 49610..50229 | + | 620 | Protein_66 | IS1 family transposase IS1X2 | Transposase |
| BS647_RS25785 (BS647_25895) | 50279..51488 | + | 1210 | Protein_67 | IS3 family transposase | - |
| BS647_RS25790 (BS647_25900) | 51532..51942 | + | 411 | Protein_68 | IS66 family transposase ISEc23 | Transposase |
| BS647_RS25795 (BS647_25905) | 51974..52588 | + | 615 | Protein_69 | IS21 family transposase ISEc10 | Transposase |
| BS647_RS25800 (BS647_25910) | 52757..56851 | - | 4095 | WP_001034121.1 | Serine protease SepA autotransporter | VF |
| BS647_RS25810 (BS647_25920) | 57253..57441 | + | 189 | WP_000957853.1 | hypothetical protein | - |
| BS647_RS25815 (BS647_25925) | 57451..58649 | + | 1199 | WP_094081567.1 | IS91 family transposase ISSbo1 | Transposase |
| BS647_RS25820 | 58818..59324 | - | 507 | Protein_73 | IS3 family transposase | - |
| BS647_RS25825 (BS647_25940) | 59387..59791 | - | 405 | WP_011114759.1 | hypothetical protein | - |
| BS647_RS28660 | 59981..60109 | - | 129 | Protein_75 | IS630 family transposase | - |
| BS647_RS28025 (BS647_25945) | 60343..61059 | - | 717 | WP_011114760.1 | hypothetical protein | - |
| BS647_RS25840 | 61643..62043 | - | 401 | Protein_77 | transposase | - |
| BS647_RS25845 (BS647_25960) | 62076..62530 | - | 455 | Protein_78 | ISL3 family transposase ISKox3 | Transposase |
| BS647_RS25850 (BS647_25965) | 62583..63793 | + | 1211 | Protein_79 | IS3 family transposase | - |
| BS647_RS25860 (BS647_25970) | 63826..63975 | - | 150 | Protein_80 | ISL3 family transposase ISEc53 | Transposase |
| BS647_RS25865 (BS647_25975) | 64150..64579 | - | 430 | Protein_81 | IS91 family transposase IS91 | Transposase |
| BS647_RS25870 (BS647_25980) | 64627..64992 | - | 366 | WP_000124083.1 | hypothetical protein | - |
| BS647_RS28115 | 65745..66143 | - | 399 | Protein_83 | reverse transcriptase/maturase family protein | - |
| BS647_RS25885 | 66146..66512 | - | 367 | Protein_84 | IS3 family transposase IS3F | Transposase |
| BS647_RS25890 | 66514..67201 | - | 688 | Protein_85 | IS3 family transposase IS629 | Transposase |
| BS647_RS25895 (BS647_26010) | 67380..68582 | - | 1203 | WP_001195004.1 | alpha-tubulin-specific protease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|