MGE detailed information
MGE type: Prophage MGE length: 24315 bp
Accession: NZ_CP020342 Location: 3364363..3388677 Organism: Shigella flexneri 1a strain 0439 Replicon: chromosome
Accession: NZ_CP020342 Location: 3364363..3388677 Organism: Shigella flexneri 1a strain 0439 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BS647_RS17965 (3359621) | 3359621..3360286 | - | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| BS647_RS17970 (3360494) | 3360494..3360928 | + | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| BS647_RS17975 (3360948) | 3360948..3361331 | + | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| BS647_RS17980 (3361363) | 3361363..3361581 | + | 219 | WP_000803661.1 | multiple antibiotic resistance protein MarB | - |
| BS647_RS17985 (3361612) | 3361612..3362511 | - | 900 | WP_000087224.1 | O-acetylserine/cysteine exporter | - |
| BS647_RS17990 (3362775) | 3362775..3363893 | + | 1119 | WP_000212732.1 | efflux MFS transporter YdeE | - |
| BS647_RS17995 (3364020) | 3364020..3364115 | + | 96 | WP_000901367.1 | protein MgtS | - |
| BS647_RS28490 (3364115) | 3364115..3364218 | + | 104 | Protein_3250 | protein MgtT | - |
| BS647_RS18000 (3364363) | 3364363..3365519 | - | 1157 | Protein_3251 | IS3 family transposase IS600 | Transposase |
| BS647_RS18005 (3365585) | 3365585..3365809 | - | 225 | Protein_3252 | YdeI family stress tolerance OB fold protein | - |
| BS647_RS18010 (3366085) | 3366085..3366603 | + | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| BS647_RS18020 (3366648) | 3366648..3368693 | - | 2046 | WP_005068122.1 | peptidyl-dipeptidase Dcp | - |
| BS647_RS18030 (3368830) | 3368830..3369576 | + | 747 | WP_005050098.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| BS647_RS18035 (3369665) | 3369665..3370351 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| BS647_RS18040 (3370529) | 3370529..3370732 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| BS647_RS18045 (3370768) | 3370768..3372228 | - | 1461 | WP_000527804.1 | mannitol dehydrogenase family protein | - |
| BS647_RS18050 (3372317) | 3372317..3373336 | - | 1020 | Protein_3259 | MHS family MFS transporter YdfJ | - |
| BS647_RS18055 (3373398) | 3373398..3374554 | + | 1157 | Protein_3260 | IS3 family transposase IS600 | Transposase |
| BS647_RS18060 (3374551) | 3374551..3374856 | - | 306 | WP_071818640.1 | hypothetical protein | - |
| BS647_RS18065 (3374881) | 3374881..3375120 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| BS647_RS18070 (3375120) | 3375120..3375407 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| BS647_RS18075 (3375479) | 3375479..3375634 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| BS647_RS18080 (3375852) | 3375852..3376103 | + | 252 | WP_000980987.1 | protein Rem | - |
| BS647_RS18085 (3376170) | 3376170..3376448 | + | 279 | Protein_3266 | hypothetical protein | - |
| BS647_RS18090 (3376450) | 3376450..3377499 | + | 1050 | WP_001265249.1 | DUF968 domain-containing protein | - |
| BS647_RS18095 (3377512) | 3377512..3377868 | + | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| BS647_RS18100 (3377883) | 3377883..3378704 | + | 822 | WP_000762882.1 | antitermination protein | - |
| BS647_RS27375 (3379625) | 3379625..3379733 | + | 109 | Protein_3270 | DUF3927 family protein | - |
| BS647_RS18125 (3380014) | 3380014..3380349 | - | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| BS647_RS18130 (3380620) | 3380620..3380805 | + | 186 | Protein_3272 | DUF1737 domain-containing protein | - |
| BS647_RS27880 (3380805) | 3380805..3380966 | + | 162 | WP_001323614.1 | hypothetical protein | - |
| BS647_RS18140 (3381116) | 3381116..3381295 | + | 180 | WP_000372594.1 | class II holin family protein | - |
| BS647_RS18145 (3381320) | 3381320..3382198 | - | 879 | Protein_3275 | IS3 family transposase IS600 | Transposase |
| BS647_RS18155 (3382969) | 3382969..3383718 | + | 750 | Protein_3277 | Type 1 fimbrin D-mannose specific adhesin | VF |
| BS647_RS18160 (3384052) | 3384052..3386331 | + | 2280 | WP_000726666.1 | acid resistance putative oxidoreductase YdeP | - |
| BS647_RS18165 (3386579) | 3386579..3386782 | + | 204 | WP_000543395.1 | two-component system connector SafA | - |
| BS647_RS18170 (3386850) | 3386850..3387611 | + | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
| BS647_RS18175 (3388013) | 3388013..3388159 | + | 147 | Protein_3281 | sulfatase | - |
| BS647_RS18185 (3388926) | 3388926..3389405 | - | 480 | Protein_3283 | cupin domain-containing protein | - |
| BS647_RS18195 (3389723) | 3389723..3390487 | + | 765 | WP_000692136.1 | electron transfer flavoprotein | - |
| BS647_RS18200 (3390507) | 3390507..3391445 | + | 939 | WP_000080702.1 | electron transfer flavoprotein subunit alpha | - |
| BS647_RS18205 (3391501) | 3391501..3392790 | + | 1290 | WP_001278524.1 | FAD-dependent oxidoreductase | - |
| BS647_RS18210 (3392787) | 3392787..3393080 | + | 294 | WP_000081083.1 | ferredoxin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|