MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 47688 bp
Accession: NZ_CP020341 Location: 1..47688 Organism: Shigella flexneri 4c strain 0702 Replicon: plasmid unnamed2
Accession: NZ_CP020341 Location: 1..47688 Organism: Shigella flexneri 4c strain 0702 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BS653_RS25755 | 651..1848 | - | 1198 | Protein_1 | Type IV secretion system protein virB10 | VF |
| BS653_RS25760 (BS653_25885) | 1845..2774 | - | 930 | Protein_2 | Type IV secretion system protein virB9 | VF |
| BS653_RS25765 (BS653_25890) | 2779..3495 | - | 717 | Protein_3 | type IV secretion system protein | - |
| BS653_RS27800 | 3485..3613 | - | 129 | WP_001328099.1 | hypothetical protein | - |
| BS653_RS25770 (BS653_25895) | 3743..4880 | - | 1138 | Protein_5 | type IV secretion system protein | - |
| BS653_RS25775 (BS653_25900) | 4834..5178 | - | 345 | WP_252988314.1 | EexN family lipoprotein | - |
| BS653_RS25780 (BS653_25905) | 5179..5937 | - | 759 | Protein_7 | type IV secretion system protein | - |
| BS653_RS27805 | 5948..6511 | - | 564 | WP_052892123.1 | Type IV secretion system protein virB4 | VF |
| BS653_RS25785 (BS653_25910) | 6566..8698 | - | 2133 | WP_252988315.1 | Type IV secretion system protein virB4 | VF |
| BS653_RS25790 (BS653_25915) | 8717..9012 | - | 296 | Protein_10 | TrbC/VirB2 family protein | - |
| BS653_RS25795 (BS653_25920) | 8990..9637 | - | 648 | WP_000953529.1 | Type IV secretion system protein virB1 | VF |
| BS653_RS25800 (BS653_25925) | 9670..9882 | - | 213 | WP_000125172.1 | hypothetical protein | - |
| BS653_RS25805 (BS653_25930) | 9812..10330 | - | 519 | WP_024127747.1 | transcription termination/antitermination NusG family protein | - |
| BS653_RS25810 (BS653_25935) | 10682..11848 | - | 1167 | WP_000539529.1 | hypothetical protein | Relaxase |
| BS653_RS25815 (BS653_25940) | 11851..12396 | - | 546 | WP_000757693.1 | DNA distortion polypeptide 1 | - |
| BS653_RS25820 (BS653_25945) | 12722..12994 | - | 273 | WP_000160399.1 | hypothetical protein | - |
| BS653_RS27185 (BS653_25950) | 13007..13156 | - | 150 | WP_000003880.1 | hypothetical protein | - |
| BS653_RS25830 (BS653_25955) | 13226..13405 | - | 180 | WP_000439078.1 | hypothetical protein | - |
| BS653_RS25835 (BS653_25960) | 13447..13776 | - | 330 | WP_000866648.1 | hypothetical protein | - |
| BS653_RS25840 (BS653_25965) | 13869..14084 | - | 216 | WP_052921379.1 | hypothetical protein | - |
| BS653_RS25845 (BS653_25970) | 14074..14319 | - | 246 | WP_001550454.1 | hypothetical protein | - |
| BS653_RS25850 (BS653_25975) | 14364..14687 | - | 324 | WP_001181903.1 | hypothetical protein | - |
| BS653_RS25855 (BS653_25980) | 14833..15114 | - | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BS653_RS25860 (BS653_25985) | 15104..15355 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| BS653_RS25870 (BS653_25995) | 16417..17271 | + | 855 | WP_001239324.1 | replication initiation protein | - |
| BS653_RS25875 (BS653_26000) | 17296..17742 | + | 447 | WP_001074386.1 | hypothetical protein | - |
| BS653_RS25880 (BS653_26005) | 17879..18235 | + | 357 | WP_052921318.1 | DNA distortion polypeptide 3 | - |
| BS653_RS25885 (BS653_26010) | 18232..19209 | - | 978 | WP_024127745.1 | hypothetical protein | - |
| BS653_RS25890 (BS653_26015) | 19234..19515 | - | 282 | WP_001185482.1 | hypothetical protein | - |
| BS653_RS25895 (BS653_26020) | 19613..20275 | - | 663 | WP_000516402.1 | division plane positioning ATPase MipZ | - |
| BS653_RS25900 (BS653_26025) | 20656..21300 | + | 645 | WP_024127744.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| BS653_RS25905 (BS653_26030) | 21497..22288 | + | 792 | WP_052921319.1 | hypothetical protein | - |
| BS653_RS25910 (BS653_26035) | 22377..23351 | - | 975 | WP_068863057.1 | Abi family protein | - |
| BS653_RS25915 (BS653_26040) | 23730..24104 | - | 375 | WP_216080271.1 | hypothetical protein | - |
| BS653_RS25920 (BS653_26045) | 24220..25080 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| BS653_RS25925 (BS653_26050) | 25263..25820 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| BS653_RS25930 (BS653_26055) | 25984..28955 | + | 2972 | Protein_37 | Tn3 family transposase TnpA_Tn3 | Transposase |
| BS653_RS25935 (BS653_26060) | 29031..30046 | - | 1016 | Protein_38 | IS3 family transposase ISEc36 | Transposase |
| BS653_RS25940 (BS653_26065) | 30441..31097 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| BS653_RS25945 (BS653_26070) | 31416..31844 | - | 429 | Protein_40 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| BS653_RS25950 (BS653_26075) | 31877..33268 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| BS653_RS25955 (BS653_26080) | 33305..33877 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| BS653_RS25960 (BS653_26085) | 34014..34559 | - | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| BS653_RS25965 (BS653_26090) | 34949..35149 | + | 201 | WP_052921392.1 | hypothetical protein | - |
| BS653_RS26770 | 35146..35688 | + | 543 | WP_068863055.1 | hypothetical protein | - |
| BS653_RS25970 (BS653_26095) | 35613..36840 | - | 1228 | Protein_46 | IS3-like element IS2 family transposase | - |
| BS653_RS25975 (BS653_26105) | 38404..39531 | + | 1128 | WP_024127759.1 | hypothetical protein | - |
| BS653_RS25980 (BS653_26110) | 39863..41767 | - | 1905 | WP_024127758.1 | NACHT domain-containing protein | - |
| BS653_RS25985 (BS653_26115) | 41850..42296 | - | 447 | WP_024127757.1 | H-NS family nucleoid-associated regulatory protein | - |
| BS653_RS25990 (BS653_26120) | 42312..42518 | - | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| BS653_RS25995 (BS653_26125) | 42515..44668 | - | 2154 | WP_024127756.1 | type IA DNA topoisomerase | - |
| BS653_RS26000 (BS653_26130) | 44755..45057 | - | 303 | WP_000717627.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| BS653_RS26005 (BS653_26135) | 45054..45467 | - | 414 | WP_024127755.1 | cag pathogenicity island Cag12 family protein | - |
| BS653_RS26010 (BS653_26140) | 45464..47299 | - | 1836 | WP_024127754.1 | type IV secretory system conjugative DNA transfer family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|