MGE detailed information
MGE type: Prophage MGE length: 19119 bp
Accession: NZ_CP020339 Location: 895327..914445 Organism: Shigella flexneri 4c strain 0702 Replicon: chromosome
Accession: NZ_CP020339 Location: 895327..914445 Organism: Shigella flexneri 4c strain 0702 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BS653_RS05055 (891989) | 891989..893635 | - | 1647 | WP_005050037.1 | medium-chain fatty-acid--CoA ligase | - |
| BS653_RS05060 (893692) | 893692..893985 | - | 294 | WP_000081083.1 | ferredoxin family protein | - |
| BS653_RS05065 (893982) | 893982..895271 | - | 1290 | WP_001278524.1 | FAD-dependent oxidoreductase | - |
| BS653_RS05070 (895327) | 895327..896265 | - | 939 | WP_000080702.1 | electron transfer flavoprotein subunit alpha | - |
| BS653_RS05075 (896285) | 896285..897049 | - | 765 | WP_000692136.1 | electron transfer flavoprotein | - |
| BS653_RS05085 (897368) | 897368..897847 | + | 480 | Protein_935 | cupin domain-containing protein | - |
| BS653_RS05090 (897902) | 897902..898599 | + | 698 | WP_242445273.1 | IS1 family transposase IS1X2 | Transposase |
| BS653_RS05095 (898593) | 898593..898760 | - | 168 | WP_005062520.1 | hypothetical protein | - |
| BS653_RS05100 (899162) | 899162..899923 | - | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
| BS653_RS05105 (899991) | 899991..900194 | - | 204 | WP_000543395.1 | two-component system connector SafA | - |
| BS653_RS05110 (900442) | 900442..902721 | - | 2280 | WP_000726666.1 | acid resistance putative oxidoreductase YdeP | - |
| BS653_RS05115 (903055) | 903055..903804 | - | 750 | Protein_941 | Type 1 fimbrin D-mannose specific adhesin | VF |
| BS653_RS05120 (903860) | 903860..904557 | + | 698 | WP_227804319.1 | IS1 family transposase IS1X2 | Transposase |
| BS653_RS05125 (904575) | 904575..905453 | + | 879 | Protein_943 | IS3 family transposase IS600 | Transposase |
| BS653_RS05130 (905478) | 905478..905657 | - | 180 | WP_000372594.1 | class II holin family protein | - |
| BS653_RS26895 (905807) | 905807..905968 | - | 162 | WP_001323614.1 | hypothetical protein | - |
| BS653_RS05140 (905968) | 905968..906153 | - | 186 | Protein_946 | DUF1737 domain-containing protein | - |
| BS653_RS05145 (906413) | 906413..906748 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| BS653_RS26160 (907029) | 907029..907137 | - | 109 | Protein_948 | DUF3927 family protein | - |
| BS653_RS05170 (908058) | 908058..908879 | - | 822 | WP_000762882.1 | antitermination protein | - |
| BS653_RS05175 (908894) | 908894..909250 | - | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| BS653_RS05180 (909263) | 909263..910312 | - | 1050 | WP_001265249.1 | DUF968 domain-containing protein | - |
| BS653_RS05185 (910314) | 910314..910592 | - | 279 | Protein_952 | hypothetical protein | - |
| BS653_RS05190 (910659) | 910659..910910 | - | 252 | WP_000980987.1 | protein Rem | - |
| BS653_RS05195 (911128) | 911128..911283 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| BS653_RS05200 (911355) | 911355..911642 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| BS653_RS05205 (911642) | 911642..911881 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| BS653_RS05210 (911906) | 911906..912211 | + | 306 | WP_071818640.1 | hypothetical protein | - |
| BS653_RS05215 (912208) | 912208..913364 | - | 1157 | Protein_958 | IS3 family transposase IS600 | Transposase |
| BS653_RS05220 (913426) | 913426..914445 | + | 1020 | Protein_959 | MHS family MFS transporter YdfJ | - |
| BS653_RS05225 (914534) | 914534..915994 | + | 1461 | WP_000527804.1 | mannitol dehydrogenase family protein | - |
| BS653_RS05230 (916030) | 916030..916233 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| BS653_RS05235 (916411) | 916411..917097 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| BS653_RS05240 (917186) | 917186..917932 | - | 747 | WP_005050098.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|