MGE detailed information
MGE type: IScluster/Tn MGE length: 22125 bp
Accession: NZ_CP020337 Location: 129850..151974 Organism: Shigella flexneri 4c strain 1602 Replicon: plasmid unnamed1
Accession: NZ_CP020337 Location: 129850..151974 Organism: Shigella flexneri 4c strain 1602 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BS654_RS25995 (BS654_26175) | 126071..126973 | + | 903 | WP_015683198.1 | DUF1281 domain-containing protein | - |
| BS654_RS26000 (BS654_26180) | 126970..127281 | + | 312 | WP_011114770.1 | hypothetical protein | - |
| BS654_RS26005 (BS654_26185) | 127345..128028 | + | 684 | WP_000086135.1 | DNA methylase | - |
| BS654_RS26010 (BS654_26190) | 128029..128250 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| BS654_RS28145 | 128210..128696 | + | 487 | Protein_143 | DUF1380 domain-containing protein | - |
| BS654_RS26025 (BS654_26205) | 128741..129511 | + | 771 | WP_001006196.1 | hypothetical protein | - |
| BS654_RS26035 (BS654_26215) | 129850..130569 | - | 720 | Protein_145 | IS110 family transposase ISSfl8 | Transposase |
| BS654_RS26040 (BS654_26220) | 130578..131639 | - | 1062 | Protein_146 | IS66 family transposase ISSfl3 | Transposase |
| BS654_RS26050 (BS654_26230) | 132895..133446 | - | 552 | Protein_148 | IS66 family transposase ISSfl3 | Transposase |
| BS654_RS26055 (BS654_26235) | 133443..133793 | - | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| BS654_RS26060 (BS654_26240) | 133790..134464 | - | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| BS654_RS26065 (BS654_26245) | 134663..135133 | + | 471 | Protein_151 | IS1 family transposase IS1N | Transposase |
| BS654_RS26070 (BS654_26250) | 135292..135930 | + | 639 | WP_000607009.1 | hypothetical protein | VF |
| BS654_RS28155 | 136045..136314 | + | 270 | Protein_153 | IS3 family transposase ISEc48 | Transposase |
| BS654_RS26080 (BS654_26260) | 136402..137444 | + | 1043 | Protein_154 | IS3 family transposase IS2 | Transposase |
| BS654_RS26085 (BS654_26265) | 137524..138198 | + | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| BS654_RS26090 (BS654_26270) | 138195..138542 | + | 348 | WP_000631708.1 | IS66 family transposase ISSfl3 | Transposase |
| BS654_RS26095 (BS654_26275) | 138562..140163 | + | 1602 | WP_011110603.1 | IS66 family transposase ISSfl3 | Transposase |
| BS654_RS26100 (BS654_26280) | 140352..140537 | + | 186 | Protein_158 | IS21 family transposase IS100 | Transposase |
| BS654_RS28595 (BS654_26285) | 140637..140846 | - | 210 | Protein_159 | peptidoglycan-binding protein | - |
| BS654_RS26110 (BS654_26290) | 140896..141147 | - | 252 | WP_015683204.1 | transporter | - |
| BS654_RS26120 (BS654_26300) | 141599..141883 | + | 285 | WP_011114774.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| BS654_RS26125 (BS654_26305) | 141883..142158 | + | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BS654_RS26140 (BS654_26320) | 143137..144090 | + | 954 | Protein_164 | IS66 family transposase ISEc49 | Transposase |
| BS654_RS26145 (BS654_26325) | 144626..144844 | + | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| BS654_RS26150 (BS654_26330) | 144846..145151 | + | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| BS654_RS26160 (BS654_26335) | 145544..147181 | + | 1638 | WP_000936806.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| BS654_RS26165 (BS654_26340) | 147389..147658 | + | 270 | Protein_168 | type II toxin-antitoxin system antitoxin YacA | - |
| BS654_RS29270 | 147658..147827 | + | 170 | Protein_169 | type II toxin-antitoxin system toxin YacB | - |
| BS654_RS26170 (BS654_26345) | 147910..148500 | + | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| BS654_RS26180 (BS654_26355) | 148857..149123 | + | 267 | Protein_171 | IS66 family transposase ISCro1 | Transposase |
| BS654_RS26185 (BS654_26360) | 149186..150454 | + | 1269 | Protein_172 | IS4 family transposase IS4 | Transposase |
| BS654_RS26190 (BS654_26365) | 150511..151720 | + | 1210 | Protein_173 | IS3 family transposase | - |
| BS654_RS29275 | 151761..151841 | + | 81 | Protein_174 | hypothetical protein | - |
| BS654_RS28700 (BS654_26370) | 151855..152046 | - | 192 | Protein_175 | IS66 family transposase ISCro1 | Transposase |
| BS654_RS26200 (BS654_26375) | 152044..152368 | + | 325 | Protein_176 | IS3 family transposase | - |
| BS654_RS26205 (BS654_26380) | 152398..155310 | - | 2913 | WP_011114777.1 | ankyrin repeat domain-containing protein | - |
| BS654_RS26220 (BS654_26390) | 155793..156635 | + | 843 | WP_000931197.1 | polysaccharide deacetylase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|