MGE detailed information
MGE type: Prophage MGE length: 73403 bp
Accession: NZ_CP020107 Location: 2472525..2545927 Organism: Escherichia coli strain 13E0767 Replicon: chromosome
Accession: NZ_CP020107 Location: 2472525..2545927 Organism: Escherichia coli strain 13E0767 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EC767_RS12475 () | 2468424..2469644 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| EC767_RS12480 () | 2469769..2470464 | + | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| EC767_RS12485 () | 2470417..2471709 | - | 1293 | WP_072039433.1 | voltage-gated ClC-type chloride channel ClcB | - |
| EC767_RS12490 () | 2471868..2472482 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| EC767_RS12495 () | 2472525..2473379 | - | 855 | WP_040092555.1 | dimethyl sulfoxide reductase anchor subunit | - |
| EC767_RS12500 () | 2473381..2473998 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| EC767_RS12505 () | 2474009..2476432 | - | 2424 | WP_001342196.1 | dimethyl sulfoxide reductase subunit A | - |
| EC767_RS12510 () | 2476493..2478919 | - | 2427 | WP_024245274.1 | dimethyl sulfoxide reductase subunit A | - |
| EC767_RS12515 () | 2479118..2479423 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| EC767_RS12520 () | 2479531..2480241 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| EC767_RS12525 () | 2480244..2480804 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| EC767_RS12530 () | 2480839..2481180 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| EC767_RS12535 () | 2481315..2481664 | + | 350 | Protein_2294 | YnfA family protein | - |
| EC767_RS12545 () | 2481845..2483059 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| EC767_RS12550 () | 2483071..2484090 | + | 1020 | WP_000836082.1 | Zn-dependent oxidoreductase | - |
| EC767_RS12555 () | 2484148..2484276 | + | 129 | WP_001389342.1 | hypothetical protein | - |
| EC767_RS12560 () | 2484278..2485558 | - | 1281 | WP_040092553.1 | Putative defective protein IntQ ; Integrase | Integrase |
| EC767_RS12565 () | 2485593..2485844 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| EC767_RS12570 () | 2485917..2488388 | - | 2472 | WP_040092551.1 | exonuclease | - |
| EC767_RS12575 () | 2488482..2488673 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| EC767_RS12580 () | 2488670..2488858 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| EC767_RS25870 () | 2489258..2489422 | + | 165 | WP_001331716.1 | hypothetical protein | - |
| EC767_RS12590 () | 2489426..2489644 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| EC767_RS12600 () | 2489804..2489959 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| EC767_RS12605 () | 2490126..2490533 | - | 408 | WP_040089727.1 | DNA-binding transcriptional dual regulator DicA | - |
| EC767_RS12610 () | 2490617..2490847 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| EC767_RS12615 () | 2490831..2491352 | + | 522 | WP_000705355.1 | hypothetical protein | - |
| EC767_RS12620 () | 2491333..2492298 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| EC767_RS12625 () | 2492339..2492761 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| EC767_RS12630 () | 2492758..2493114 | + | 357 | WP_001374839.1 | class I SAM-dependent methyltransferase | - |
| EC767_RS26130 () | 2493725..2494012 | + | 288 | Protein_2312 | hypothetical protein | - |
| EC767_RS12650 () | 2494781..2496122 | + | 1342 | Protein_2313 | ISNCY family transposase ISCARN112 | Transposase |
| EC767_RS12655 () | 2496559..2496891 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| EC767_RS12660 () | 2497094..2497399 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| EC767_RS12665 () | 2497424..2497663 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EC767_RS12670 () | 2497663..2497950 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EC767_RS12675 () | 2498022..2498177 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EC767_RS12680 () | 2498394..2498645 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| EC767_RS12685 () | 2498712..2498990 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| EC767_RS12690 () | 2498992..2500041 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| EC767_RS12695 () | 2500055..2500807 | + | 753 | WP_001047135.1 | antitermination protein | - |
| EC767_RS25875 () | 2501085..2501174 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| EC767_RS12700 () | 2501229..2501441 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| EC767_RS12705 () | 2501742..2501957 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| EC767_RS26240 () | 2502321..2502491 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| EC767_RS12710 () | 2502711..2502926 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| EC767_RS12715 () | 2502931..2503242 | + | 312 | WP_000189915.1 | YdfR family protein | - |
| EC767_RS12720 () | 2503239..2503772 | + | 534 | WP_001092971.1 | lysozyme | - |
| EC767_RS12725 () | 2503769..2504266 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| EC767_RS12730 () | 2504630..2504842 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| EC767_RS12735 () | 2504853..2505041 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| EC767_RS25880 () | 2505044..2505109 | + | 66 | WP_122134696.1 | hypothetical protein | - |
| EC767_RS12740 () | 2505189..2505344 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| EC767_RS12745 () | 2505516..2505689 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| EC767_RS12750 () | 2505841..2506251 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| EC767_RS12755 () | 2506309..2506542 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| EC767_RS12765 () | 2506931..2507476 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| EC767_RS12770 () | 2507451..2509376 | + | 1926 | WP_001027295.1 | phage terminase large subunit family protein | - |
| EC767_RS12775 () | 2509373..2509579 | + | 207 | WP_000198149.1 | gpW family protein | - |
| EC767_RS12780 () | 2509576..2511176 | + | 1601 | Protein_2341 | phage portal protein | - |
| EC767_RS12785 () | 2511157..2512476 | + | 1320 | WP_080029809.1 | S49 family peptidase | - |
| EC767_RS12790 () | 2512486..2512818 | + | 333 | WP_001358225.1 | head decoration protein | - |
| EC767_RS12795 () | 2512874..2513119 | + | 246 | Protein_2344 | major capsid protein | - |
| EC767_RS12800 () | 2513282..2514517 | + | 1236 | WP_024046419.1 | Prophage integrase IntS ; Integrase | Integrase |
| EC767_RS12805 () | 2514519..2514743 | + | 225 | WP_024046420.1 | AlpA family phage regulatory protein | - |
| EC767_RS12810 () | 2514757..2516160 | + | 1404 | WP_024046421.1 | hypothetical protein | - |
| EC767_RS12815 () | 2516211..2516390 | - | 180 | WP_040092232.1 | DUF3950 domain-containing protein | - |
| EC767_RS12820 () | 2516530..2516895 | + | 366 | WP_040092231.1 | host cell division inhibitor Icd-like protein | - |
| EC767_RS12825 () | 2516888..2517112 | + | 225 | WP_000999172.1 | hypothetical protein | - |
| EC767_RS12830 () | 2517116..2517403 | + | 288 | WP_000790824.1 | DUF4222 domain-containing protein | - |
| EC767_RS12835 () | 2517400..2519220 | + | 1821 | WP_000817024.1 | DNA primase | - |
| EC767_RS12840 () | 2519508..2519753 | + | 246 | WP_000125506.1 | hypothetical protein | - |
| EC767_RS12845 () | 2519750..2520199 | + | 450 | WP_000126719.1 | single-stranded DNA-binding protein | - |
| EC767_RS12850 () | 2520417..2521457 | + | 1041 | WP_040092230.1 | major capsid protein | - |
| EC767_RS12855 () | 2521467..2521808 | + | 342 | WP_000190778.1 | head decoration protein | - |
| EC767_RS12860 () | 2521820..2522203 | + | 384 | WP_001179421.1 | AlpA family phage regulatory protein | - |
| EC767_RS12865 () | 2522196..2522411 | + | 216 | WP_071780743.1 | hypothetical protein | - |
| EC767_RS12870 () | 2522629..2522871 | + | 243 | WP_000496061.1 | hypothetical protein | - |
| EC767_RS12875 () | 2522967..2523653 | + | 687 | WP_000918608.1 | hypothetical protein | - |
| EC767_RS12880 () | 2523846..2524133 | - | 288 | WP_021540094.1 | DUF3892 domain-containing protein | - |
| EC767_RS12885 () | 2524352..2525140 | + | 789 | Protein_2362 | major capsid protein | - |
| EC767_RS12890 () | 2525182..2525577 | + | 396 | WP_000158875.1 | DNA-packaging protein FI | - |
| EC767_RS12895 () | 2525589..2525942 | + | 354 | WP_000785282.1 | head-tail joining protein | - |
| EC767_RS12900 () | 2525954..2526532 | + | 579 | WP_000975081.1 | phage tail protein | - |
| EC767_RS12905 () | 2526529..2526924 | + | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| EC767_RS12910 () | 2526932..2527672 | + | 741 | WP_001543784.1 | phage tail protein | - |
| EC767_RS12915 () | 2527688..2527924 | + | 237 | Protein_2368 | phage minor tail protein G | - |
| EC767_RS12920 () | 2527996..2529173 | + | 1178 | WP_085968792.1 | IS3 family transposase ISCfr6 | Transposase |
| EC767_RS12925 () | 2529198..2529371 | + | 174 | WP_077904247.1 | phage minor tail protein G | - |
| EC767_RS12930 () | 2529353..2529787 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| EC767_RS12935 () | 2529780..2532359 | + | 2580 | WP_000840337.1 | phage tail tape measure protein | - |
| EC767_RS12940 () | 2532356..2532685 | + | 330 | WP_000847331.1 | phage tail protein | - |
| EC767_RS12945 () | 2532685..2533383 | + | 699 | WP_001152624.1 | phage minor tail protein L | - |
| EC767_RS12950 () | 2533389..2534132 | + | 744 | WP_000194780.1 | C40 family peptidase | - |
| EC767_RS12955 () | 2534069..2534701 | + | 633 | WP_000090891.1 | tail assembly protein | - |
| EC767_RS12960 () | 2534762..2538241 | + | 3480 | WP_080029810.1 | host specificity protein J | - |
| EC767_RS12965 () | 2538309..2538908 | + | 600 | WP_001568881.1 | Outer membrane protein X | VF |
| EC767_RS12970 () | 2538973..2542044 | + | 3072 | WP_072024347.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EC767_RS12975 () | 2542044..2542619 | + | 576 | WP_040093009.1 | tail fiber assembly protein | - |
| EC767_RS12980 () | 2542717..2543307 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EC767_RS12985 () | 2543624..2543857 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| EC767_RS25885 () | 2543926..2544039 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| EC767_RS12990 () | 2544644..2545927 | + | 1284 | Protein_2384 | MHS family MFS transporter YdfJ | - |
| EC767_RS12995 () | 2546016..2547476 | + | 1461 | WP_000527756.1 | mannitol dehydrogenase family protein | - |
| EC767_RS13000 () | 2547512..2547715 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EC767_RS13005 () | 2547893..2548579 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| EC767_RS13010 () | 2548668..2549414 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|