MGE detailed information
MGE type: Prophage MGE length: 51607 bp
Accession: NZ_CP020106 Location: 2401916..2453522 Organism: Escherichia coli strain 13E0780 Replicon: chromosome
Accession: NZ_CP020106 Location: 2401916..2453522 Organism: Escherichia coli strain 13E0780 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EC780_RS12790 () | 2397432..2399243 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| EC780_RS12795 () | 2399280..2399921 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| EC780_RS12800 () | 2399977..2401155 | - | 1179 | WP_000173474.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| EC780_RS12805 () | 2401289..2401579 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| EC780_RS12810 () | 2401646..2402002 | + | 357 | WP_001397206.1 | protein YebF | - |
| EC780_RS12815 () | 2402329..2402988 | + | 660 | WP_000024759.1 | tellurite resistance TerB family protein | - |
| EC780_RS12825 () | 2403197..2405255 | + | 2059 | Protein_2345 | oligopeptidase B | - |
| EC780_RS12830 () | 2405252..2405914 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| EC780_RS12835 () | 2405938..2406594 | - | 657 | WP_000011652.1 | carbon-nitrogen hydrolase family protein | - |
| EC780_RS12840 () | 2406696..2406926 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| EC780_RS12845 () | 2407065..2407439 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| EC780_RS12850 () | 2407443..2408315 | + | 873 | WP_000879298.1 | copper homeostasis membrane protein CopD | - |
| EC780_RS12855 () | 2408328..2408669 | + | 342 | WP_000976476.1 | YebY family protein | - |
| EC780_RS12860 () | 2409062..2410138 | - | 1077 | WP_001189085.1 | hypothetical protein ; Integrase | Integrase |
| EC780_RS12865 () | 2410104..2410385 | - | 282 | WP_001311878.1 | excisionase | - |
| EC780_RS12870 () | 2410492..2410680 | - | 189 | WP_024165285.1 | DUF1187 family protein | - |
| - () | 2410496..2410674 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2410496..2410674 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2410496..2410674 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2410496..2410674 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| EC780_RS12875 () | 2410673..2410867 | - | 195 | WP_001307771.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| EC780_RS12880 () | 2410899..2411579 | - | 681 | WP_000186708.1 | YqaJ viral recombinase family protein | - |
| EC780_RS12885 () | 2411576..2412361 | - | 786 | WP_001484907.1 | phage recombination protein Bet | - |
| EC780_RS12890 () | 2412367..2412663 | - | 297 | WP_001484906.1 | host-nuclease inhibitor protein Gam | - |
| EC780_RS12895 () | 2412641..2414657 | - | 2017 | Protein_2359 | hypothetical protein | - |
| EC780_RS12900 () | 2414759..2415034 | - | 276 | WP_001358843.1 | hypothetical protein | - |
| EC780_RS12905 () | 2415109..2415285 | - | 177 | WP_000258918.1 | hypothetical protein | - |
| EC780_RS12910 () | 2415279..2415500 | - | 222 | WP_000560228.1 | killing protein KilR | - |
| EC780_RS12915 () | 2415547..2416395 | - | 849 | WP_000935601.1 | Rha family phage regulatory protein | - |
| EC780_RS12925 () | 2416824..2416976 | - | 153 | WP_001169149.1 | DUF1391 family protein | - |
| EC780_RS12935 () | 2417357..2417821 | - | 465 | WP_001253182.1 | helix-turn-helix domain-containing protein | - |
| EC780_RS12940 () | 2417926..2418201 | + | 276 | WP_000171139.1 | helix-turn-helix domain-containing protein | - |
| EC780_RS12945 () | 2418185..2418607 | + | 423 | WP_000702023.1 | hypothetical protein | - |
| EC780_RS12950 () | 2418620..2419477 | + | 858 | WP_000899743.1 | DUF1376 domain-containing protein | - |
| EC780_RS12955 () | 2419484..2420230 | + | 747 | WP_000788990.1 | ATP-binding protein | - |
| EC780_RS12960 () | 2420252..2421022 | + | 771 | WP_050923614.1 | DUF1627 domain-containing protein | - |
| EC780_RS12965 () | 2421038..2421430 | + | 393 | WP_001141093.1 | DUF977 family protein | - |
| EC780_RS12970 () | 2421487..2422071 | + | 585 | WP_000206794.1 | DUF551 domain-containing protein | - |
| EC780_RS12975 () | 2422187..2422291 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| EC780_RS12985 () | 2422537..2422692 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EC780_RS12990 () | 2422901..2423080 | + | 180 | WP_000119356.1 | hypothetical protein | - |
| EC780_RS12995 () | 2423099..2423584 | + | 486 | WP_000818166.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| EC780_RS29560 () | 2423813..2423986 | + | 174 | WP_000687447.1 | hypothetical protein | - |
| EC780_RS13000 () | 2424046..2424645 | + | 600 | WP_000940340.1 | DUF1367 family protein | - |
| EC780_RS13005 () | 2424645..2424935 | + | 291 | WP_000228018.1 | DUF1364 domain-containing protein | - |
| EC780_RS13010 () | 2424932..2425486 | + | 555 | WP_000640170.1 | DUF1133 family protein | - |
| EC780_RS13020 () | 2425757..2426314 | + | 558 | Protein_2381 | ORF6N domain-containing protein | - |
| EC780_RS13030 () | 2427028..2428974 | + | 1947 | WP_080029432.1 | DUF1737 domain-containing protein | - |
| EC780_RS13035 () | 2429111..2429290 | + | 180 | WP_000143463.1 | DUF1378 family protein | - |
| EC780_RS13040 () | 2429331..2429576 | + | 246 | WP_001290230.1 | DUF826 domain-containing protein | - |
| EC780_RS13045 () | 2429654..2429869 | + | 216 | WP_001072901.1 | class II holin family protein | - |
| EC780_RS13050 () | 2429874..2430407 | + | 534 | WP_062871796.1 | lysozyme | - |
| EC780_RS29565 () | 2430404..2430871 | + | 468 | WP_001255338.1 | lysis protein | - |
| EC780_RS13060 () | 2430895..2431119 | + | 225 | WP_029786607.1 | hypothetical protein | - |
| EC780_RS13075 () | 2431538..2432014 | + | 477 | WP_000373407.1 | DUF1441 family protein | - |
| EC780_RS13080 () | 2432011..2434133 | + | 2123 | Protein_2390 | phage terminase large subunit family protein | - |
| EC780_RS13085 () | 2434130..2434342 | + | 213 | WP_000102415.1 | hypothetical protein | - |
| EC780_RS13090 () | 2434342..2435844 | + | 1503 | WP_000974564.1 | phage portal protein | - |
| EC780_RS29570 () | 2435789..2437812 | + | 2024 | Protein_2393 | Putative antitoxin VapB45 | VF |
| EC780_RS13100 () | 2437900..2438226 | + | 327 | WP_001097065.1 | DUF2190 family protein | - |
| EC780_RS13105 () | 2438219..2438500 | + | 282 | WP_001281350.1 | DNA breaking-rejoining protein | - |
| EC780_RS13110 () | 2438503..2439126 | + | 624 | WP_080029433.1 | phage tail protein | - |
| EC780_RS13115 () | 2439139..2439537 | + | 399 | WP_000682716.1 | tail protein | - |
| EC780_RS13120 () | 2439545..2440297 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| EC780_RS13125 () | 2440311..2440733 | + | 423 | WP_044707580.1 | phage minor tail protein G | - |
| EC780_RS13130 () | 2440760..2441068 | + | 309 | WP_000533450.1 | phage tail assembly protein T | - |
| EC780_RS13135 () | 2441112..2443757 | + | 2646 | WP_080025946.1 | phage tail tape measure protein | - |
| EC780_RS13140 () | 2443754..2444083 | + | 330 | WP_000847298.1 | phage tail protein | - |
| EC780_RS13145 () | 2444083..2444781 | + | 699 | WP_024236480.1 | phage minor tail protein L | - |
| EC780_RS13150 () | 2444787..2445530 | + | 744 | WP_001443526.1 | C40 family peptidase | - |
| EC780_RS13155 () | 2445476..2446105 | + | 630 | WP_122994373.1 | tail assembly protein | - |
| EC780_RS13160 () | 2446346..2449822 | + | 3477 | WP_080029435.1 | host specificity protein J | - |
| EC780_RS13165 () | 2449889..2450488 | + | 600 | WP_001230398.1 | putative ABC transporter-binding protein | VF |
| EC780_RS13170 () | 2450553..2451866 | + | 1314 | WP_045893719.1 | ISNCY family transposase KIS | Transposase |
| EC780_RS13175 () | 2451868..2452137 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| EC780_RS13180 () | 2452866..2453522 | + | 657 | WP_000812720.1 | protein-serine/threonine phosphatase | - |
| EC780_RS13185 () | 2453523..2453714 | - | 192 | WP_001296140.1 | YebW family protein | - |
| EC780_RS13190 () | 2453819..2454055 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| EC780_RS13195 () | 2454173..2455612 | - | 1440 | WP_001443441.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| EC780_RS13200 () | 2455692..2458325 | - | 2634 | WP_032314101.1 | lipid-binding membrane homeostasis protein YebT | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|