MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 47674 bp
Accession: NZ_CP020088 Location: 1..47674 Organism: Shigella flexneri 1a strain 0670 Replicon: plasmid unnamed2
Accession: NZ_CP020088 Location: 1..47674 Organism: Shigella flexneri 1a strain 0670 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B4376_RS26645 (B4376_26795) | 33..1037 | + | 1005 | Protein_0 | IS3 family transposase | - |
| B4376_RS26650 (B4376_26800) | 1025..4083 | - | 3059 | Protein_1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| B4376_RS26660 (B4376_26805) | 4247..4804 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| B4376_RS26665 (B4376_26810) | 4987..5847 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| B4376_RS26670 (B4376_26815) | 5963..6337 | + | 375 | WP_216080271.1 | hypothetical protein | - |
| B4376_RS26675 (B4376_26820) | 6716..7690 | + | 975 | WP_068863057.1 | Abi family protein | - |
| B4376_RS26680 (B4376_26825) | 7779..8570 | - | 792 | WP_052921319.1 | hypothetical protein | - |
| B4376_RS26685 (B4376_26830) | 8767..9411 | - | 645 | WP_024127744.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| B4376_RS26690 (B4376_26835) | 9792..10454 | + | 663 | WP_000516402.1 | division plane positioning ATPase MipZ | - |
| B4376_RS26695 (B4376_26840) | 10552..10833 | + | 282 | WP_001185482.1 | hypothetical protein | - |
| B4376_RS26700 (B4376_26845) | 10858..11835 | + | 978 | WP_024127745.1 | hypothetical protein | - |
| B4376_RS26705 (B4376_26850) | 11832..12188 | - | 357 | WP_052921318.1 | DNA distortion polypeptide 3 | - |
| B4376_RS26710 (B4376_26855) | 12325..12771 | - | 447 | WP_001074386.1 | hypothetical protein | - |
| B4376_RS26715 (B4376_26860) | 12796..13650 | - | 855 | WP_001239324.1 | replication initiation protein | - |
| B4376_RS26725 (B4376_26870) | 14712..14963 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| B4376_RS26730 (B4376_26875) | 14953..15234 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| B4376_RS26735 (B4376_26880) | 15380..15703 | + | 324 | WP_001181903.1 | hypothetical protein | - |
| B4376_RS26740 (B4376_26885) | 15748..15993 | + | 246 | WP_001550454.1 | hypothetical protein | - |
| B4376_RS26745 (B4376_26890) | 15983..16198 | + | 216 | WP_052921379.1 | hypothetical protein | - |
| B4376_RS26750 (B4376_26895) | 16291..16620 | + | 330 | WP_000866648.1 | hypothetical protein | - |
| B4376_RS26755 (B4376_26900) | 16663..16842 | + | 180 | WP_000439078.1 | hypothetical protein | - |
| B4376_RS28050 (B4376_26905) | 16912..17061 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| B4376_RS26765 (B4376_26910) | 17074..17346 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| B4376_RS26770 (B4376_26915) | 17672..18217 | + | 546 | WP_000757693.1 | DNA distortion polypeptide 1 | - |
| B4376_RS26775 (B4376_26920) | 18220..19386 | + | 1167 | WP_000539529.1 | hypothetical protein | Relaxase |
| B4376_RS26780 (B4376_26925) | 19739..20257 | + | 519 | WP_024127747.1 | transcription termination/antitermination NusG family protein | - |
| B4376_RS26785 (B4376_26930) | 20187..20399 | + | 213 | WP_000125172.1 | hypothetical protein | - |
| B4376_RS26790 (B4376_26935) | 20432..21079 | + | 648 | WP_000953529.1 | Type IV secretion system protein virB1 | VF |
| B4376_RS26795 (B4376_26940) | 21057..21353 | + | 297 | WP_000916182.1 | TrbC/VirB2 family protein | - |
| B4376_RS28635 | 21372..21560 | + | 189 | Protein_29 | Type IV secretion system protein virB4 | VF |
| B4376_RS26800 (B4376_26945) | 22131..24125 | + | 1995 | WP_072107035.1 | Type IV secretion system protein virB4 | VF |
| B4376_RS26805 (B4376_26950) | 24136..24894 | + | 759 | WP_000744200.1 | type IV secretion system protein | - |
| B4376_RS26810 (B4376_26955) | 24895..25182 | + | 288 | WP_000835347.1 | EexN family lipoprotein | - |
| B4376_RS26815 (B4376_26960) | 25191..26321 | + | 1131 | WP_024127751.1 | type IV secretion system protein | - |
| B4376_RS28640 | 26449..26577 | + | 129 | WP_001328099.1 | hypothetical protein | - |
| B4376_RS26820 (B4376_26965) | 26567..27280 | + | 714 | WP_000394613.1 | type IV secretion system protein | - |
| B4376_RS26825 (B4376_26970) | 27285..28214 | + | 930 | WP_024127752.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| B4376_RS26830 (B4376_26975) | 28211..29416 | + | 1206 | WP_052921380.1 | Type IV secretion system protein virB10 | VF |
| B4376_RS26835 (B4376_26980) | 29418..30449 | + | 1032 | WP_052921381.1 | Type IV secretion system protein VirB11 | VF |
| B4376_RS26840 (B4376_26985) | 30452..32287 | + | 1836 | WP_024127754.1 | type IV secretory system conjugative DNA transfer family protein | - |
| B4376_RS26845 (B4376_26990) | 32284..32697 | + | 414 | WP_024127755.1 | cag pathogenicity island Cag12 family protein | - |
| B4376_RS26850 (B4376_26995) | 32694..32996 | + | 303 | WP_000717627.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| B4376_RS26855 (B4376_27000) | 33083..35236 | + | 2154 | WP_024127756.1 | type IA DNA topoisomerase | - |
| B4376_RS26860 (B4376_27005) | 35233..35439 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| B4376_RS26865 (B4376_27010) | 35455..35901 | + | 447 | WP_024127757.1 | H-NS family nucleoid-associated regulatory protein | - |
| B4376_RS26870 (B4376_27015) | 35984..37888 | + | 1905 | WP_024127758.1 | NACHT domain-containing protein | - |
| B4376_RS26875 (B4376_27020) | 38220..39347 | - | 1128 | WP_024127759.1 | hypothetical protein | - |
| B4376_RS26880 (B4376_27030) | 40911..42139 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| B4376_RS27720 | 42064..42606 | - | 543 | WP_068863055.1 | hypothetical protein | - |
| B4376_RS26885 (B4376_27035) | 42603..42803 | - | 201 | WP_052921392.1 | hypothetical protein | - |
| B4376_RS26890 (B4376_27040) | 43193..43738 | + | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| B4376_RS26895 (B4376_27045) | 43875..44447 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| B4376_RS26900 (B4376_27050) | 44484..45875 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| B4376_RS26905 (B4376_27055) | 45908..46336 | + | 429 | Protein_53 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| B4376_RS26910 (B4376_27060) | 46655..47311 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|