MGE detailed information
MGE type: IScluster/Tn MGE length: 46196 bp
Accession: NZ_CP020087 Location: 152546..198741 Organism: Shigella flexneri 1a strain 0670 Replicon: plasmid unnamed1
Accession: NZ_CP020087 Location: 152546..198741 Organism: Shigella flexneri 1a strain 0670 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B4376_RS26185 (B4376_26325) | 150643..150831 | + | 189 | WP_000957853.1 | hypothetical protein | - |
| B4376_RS26190 (B4376_26330) | 150841..152040 | + | 1200 | WP_000947175.1 | IS91 family transposase | - |
| B4376_RS26195 (B4376_26335) | 152253..153061 | + | 809 | WP_094096897.1 | IS5 family transposase ISSfl7 | Transposase |
| B4376_RS26200 (B4376_26345) | 153176..154207 | + | 1032 | WP_004998488.1 | IS630 family transposase IS630 | Transposase |
| B4376_RS26205 (B4376_26355) | 154401..155091 | + | 691 | Protein_191 | IS1 family transposase | - |
| B4376_RS26210 (B4376_26360) | 155108..155287 | - | 180 | Protein_192 | transposase | - |
| B4376_RS26215 (B4376_26365) | 155616..157313 | + | 1698 | WP_010921637.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| B4376_RS26220 (B4376_26370) | 157741..159465 | + | 1725 | WP_010921638.1 | putative E3 ubiquitin-protein ligase ipaH4.5 | VF |
| B4376_RS26225 | 159517..160252 | + | 736 | Protein_195 | IS3 family transposase | - |
| B4376_RS26240 (B4376_26395) | 160925..162433 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| B4376_RS26245 (B4376_26400) | 162523..162995 | + | 473 | Protein_197 | IS3 family transposase IS629 | Transposase |
| B4376_RS28115 (B4376_26405) | 163039..163251 | - | 213 | Protein_198 | DDE-type integrase/transposase/recombinase | - |
| B4376_RS26255 (B4376_26410) | 163526..163801 | + | 276 | WP_227804373.1 | S-type pyocin domain-containing protein | - |
| B4376_RS26260 (B4376_26415) | 163999..165363 | + | 1365 | WP_000051931.1 | MFS transporter | - |
| B4376_RS26265 (B4376_26420) | 165413..165622 | + | 210 | Protein_201 | peptidoglycan-binding protein | - |
| B4376_RS26270 (B4376_26425) | 165716..165907 | - | 192 | Protein_202 | IS21 family transposase IS100 | Transposase |
| B4376_RS26275 (B4376_26430) | 165948..166445 | - | 498 | Protein_203 | IS66 family transposase ISEc47 | Transposase |
| B4376_RS26280 (B4376_26435) | 166548..167020 | - | 473 | Protein_204 | IS3 family transposase IS629 | Transposase |
| B4376_RS26285 (B4376_26440) | 167110..168618 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| B4376_RS26300 | 169291..170026 | - | 736 | Protein_206 | IS3 family transposase | - |
| B4376_RS26305 (B4376_26465) | 170206..170940 | + | 735 | Protein_207 | IS21 family transposase IS100kyp | Transposase |
| B4376_RS26315 (B4376_26475) | 172504..172776 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| B4376_RS26325 (B4376_26480) | 172943..173062 | - | 120 | Protein_210 | IS66 family insertion sequence element accessory protein TnpB | - |
| B4376_RS26330 (B4376_26485) | 173179..174876 | - | 1698 | WP_024259347.1 | hypothetical protein | VF |
| B4376_RS26335 | 174952..175101 | + | 150 | Protein_212 | IS1 family transposase | - |
| B4376_RS26340 (B4376_26490) | 175205..176617 | - | 1413 | WP_001026857.1 | hypothetical protein | VF |
| B4376_RS27710 | 177067..177129 | + | 63 | Protein_214 | IS66 family transposase ISCro1 | Transposase |
| B4376_RS26345 (B4376_26495) | 177150..177371 | - | 222 | Protein_215 | IS66 family transposase ISCro1 | Transposase |
| B4376_RS26350 (B4376_26500) | 177514..177707 | - | 194 | Protein_216 | HNH endonuclease | - |
| B4376_RS26360 (B4376_26510) | 178911..179384 | - | 474 | WP_005038443.1 | CFA/I fimbrial subunit D | VF |
| B4376_RS26365 (B4376_26515) | 179635..180831 | + | 1197 | WP_005085088.1 | IS110 family transposase ISSfl4 | Transposase |
| B4376_RS26370 (B4376_26520) | 180826..181250 | - | 425 | Protein_220 | hypothetical protein | - |
| B4376_RS26375 (B4376_26525) | 181478..182116 | - | 639 | WP_000502854.1 | ParB N-terminal domain-containing protein | - |
| B4376_RS26380 | 182101..182244 | - | 144 | Protein_222 | DUF3440 domain-containing protein | - |
| B4376_RS26395 (B4376_26540) | 184848..185129 | + | 282 | Protein_225 | IS4 family transposase ISSfl1 | Transposase |
| B4376_RS26400 (B4376_26545) | 185302..185787 | - | 486 | WP_000501974.1 | GNAT family N-acetyltransferase | Toxin Detail |
| B4376_RS26405 (B4376_26550) | 185775..186059 | - | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| B4376_RS28045 | 186961..187125 | + | 165 | WP_001346193.1 | hypothetical protein | - |
| B4376_RS26425 (B4376_26570) | 187379..188980 | - | 1602 | WP_005063916.1 | IS66 family transposase ISSfl3 | Transposase |
| B4376_RS26430 (B4376_26575) | 188977..189327 | - | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| B4376_RS26435 (B4376_26580) | 189324..189998 | - | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| B4376_RS26440 (B4376_26585) | 190570..192024 | + | 1455 | WP_015683184.1 | hypothetical protein | VF |
| B4376_RS26450 (B4376_26595) | 192362..193426 | + | 1065 | Protein_233 | IS3 family transposase IS600 | Transposase |
| B4376_RS26455 | 193467..194270 | + | 804 | Protein_234 | IS3 family transposase ISKpn38 | Transposase |
| B4376_RS28625 | 194385..194726 | + | 342 | Protein_235 | IS21 family transposase ISEc62 | Transposase |
| B4376_RS26460 (B4376_26610) | 194709..195546 | + | 838 | Protein_236 | IS21 family transposase ISEc62 | Transposase |
| B4376_RS26465 (B4376_26615) | 195596..196792 | - | 1197 | WP_005119583.1 | IS110 family transposase ISSfl4 | Transposase |
| B4376_RS26470 (B4376_26620) | 196984..197988 | - | 1005 | WP_000255980.1 | IS21 family transposase IS100kyp | Transposase |
| B4376_RS28630 | 198335..199144 | + | 810 | Protein_239 | IS110 family transposase | - |
| B4376_RS26480 (B4376_26630) | 199341..200120 | + | 780 | WP_005059304.1 | type III secretion system effector cysteine protease IpaJ | - |
| B4376_RS26485 (B4376_26635) | 201067..201996 | - | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| B4376_RS26490 (B4376_26640) | 202213..202449 | - | 237 | WP_000588813.1 | phosphopantetheine-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|