MGE detailed information
MGE type: Prophage MGE length: 51615 bp
Accession: NZ_CP020085 Location: 899345..950959 Organism: Glaesserella parasuis strain CL120103 Replicon: chromosome
Accession: NZ_CP020085 Location: 899345..950959 Organism: Glaesserella parasuis strain CL120103 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B4X03_RS04480 | 894799..895404 | - | 606 | WP_021114078.1 | aminotransferase class IV family protein | - |
| B4X03_RS04485 | 895382..896353 | - | 972 | WP_021114079.1 | aminodeoxychorismate synthase component I | - |
| B4X03_RS04490 | 896386..896580 | + | 195 | Protein_861 | cation transporter | - |
| B4X03_RS04495 | 896804..897667 | + | 864 | WP_082259130.1 | SAM-dependent methyltransferase TehB | - |
| B4X03_RS04500 | 897782..898753 | + | 972 | WP_021116197.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| B4X03_RS04505 | 899205..899806 | + | 602 | Protein_864 | transposase | - |
| B4X03_RS04510 | 899877..901733 | - | 1857 | WP_082259131.1 | RNA polymerase sigma factor RpoD | - |
| B4X03_RS04515 | 901832..903580 | - | 1749 | WP_021112720.1 | DNA primase | - |
| B4X03_RS04520 | 903724..903939 | - | 216 | WP_005712190.1 | 30S ribosomal protein S21 | - |
| B4X03_RS04525 | 904109..904513 | - | 405 | WP_052317703.1 | hypothetical protein | - |
| B4X03_RS04530 | 904833..905930 | + | 1098 | Protein_869 | ISAs1 family transposase ISAma3 | Transposase |
| B4X03_RS04535 | 905964..906539 | - | 576 | Protein_870 | ATP-binding cassette domain-containing protein | - |
| B4X03_RS04540 | 906660..907073 | - | 414 | WP_257788245.1 | ISAs1 family transposase ISAma3 | Transposase |
| B4X03_RS11230 | 907087..907392 | - | 306 | WP_106379859.1 | IS3 family transposase ISLad1 | Transposase |
| B4X03_RS11235 | 907447..907872 | - | 426 | WP_071610673.1 | IS3 family transposase ISKpn37 | Transposase |
| B4X03_RS04550 | 907911..908234 | - | 324 | WP_021118421.1 | IS3 family transposase IS222 | Transposase |
| B4X03_RS04555 | 908287..909552 | - | 1266 | WP_082259132.1 | tRNA lysidine(34) synthetase TilS | - |
| B4X03_RS04560 | 909559..910419 | - | 861 | WP_021114409.1 | pyridoxal kinase PdxY | - |
| B4X03_RS04565 | 910505..911458 | - | 954 | WP_021114408.1 | acetyl-CoA carboxylase carboxyl transferase subunit alpha | - |
| B4X03_RS04570 | 911664..911960 | - | 297 | Protein_878 | ribosome assembly RNA-binding protein YhbY | - |
| B4X03_RS11510 | 911973..913031 | - | 1059 | Protein_879 | ISAs1 family transposase ISAma3 | Transposase |
| B4X03_RS04585 | 913452..914348 | + | 897 | WP_021113240.1 | transcriptional regulator GcvA | - |
| B4X03_RS04590 | 914370..915044 | + | 675 | WP_010786074.1 | pyrimidine 5'-nucleotidase | - |
| B4X03_RS04595 | 915062..916045 | + | 984 | WP_021112000.1 | HTH-type transcriptional regulator CysB | - |
| B4X03_RS04600 | 916045..916686 | + | 642 | WP_043896638.1 | hypothetical protein | - |
| B4X03_RS04605 | 916889..917716 | + | 828 | WP_021117792.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| B4X03_RS04610 | 917815..918800 | - | 986 | Protein_885 | 2-hydroxyacid dehydrogenase | - |
| B4X03_RS04615 | 918823..919932 | - | 1110 | WP_021112005.1 | flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | - |
| B4X03_RS04620 | 919934..920974 | - | 1041 | WP_021114535.1 | DUF4115 domain-containing protein | - |
| B4X03_RS04625 | 921109..922974 | - | 1866 | WP_021114536.1 | signal peptide peptidase SppA | - |
| B4X03_RS04630 | 923192..924973 | + | 1782 | WP_021113241.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| B4X03_RS04635 | 925113..925796 | + | 684 | WP_021113230.1 | nicotinamide riboside transporter PnuC | - |
| B4X03_RS04640 | 925888..926598 | + | 711 | WP_021113223.1 | DnaA regulatory inactivator Hda | - |
| B4X03_RS04645 | 926599..927225 | + | 627 | WP_021114537.1 | Cytochrome c biogenesis ATP-binding export protein CcmA | VF |
| B4X03_RS04650 | 927235..927897 | + | 663 | WP_021113229.1 | Heme exporter protein B | VF |
| B4X03_RS04655 | 927944..928684 | + | 741 | WP_021114538.1 | Heme exporter protein C | VF |
| B4X03_RS04660 | 928693..928887 | + | 195 | WP_010786065.1 | heme exporter protein CcmD | - |
| B4X03_RS04665 | 929052..930440 | + | 1389 | WP_082259135.1 | DASS family sodium-coupled anion symporter | - |
| B4X03_RS04670 | 930679..931854 | + | 1176 | WP_082259136.1 | phosphoglycerate kinase | - |
| B4X03_RS04675 | 931996..933075 | + | 1080 | WP_082259137.1 | class II fructose-bisphosphate aldolase | - |
| B4X03_RS04680 | 933247..934047 | + | 801 | WP_005710396.1 | ABC transporter ATP-binding protein | - |
| B4X03_RS04685 | 934060..934698 | + | 639 | WP_021114541.1 | nitroreductase family protein | - |
| B4X03_RS04690 | 934911..936008 | - | 1098 | WP_082259138.1 | ISAs1 family transposase ISAma3 | Transposase |
| B4X03_RS04695 | 936083..936535 | + | 453 | Protein_902 | TIGR00645 family protein | - |
| B4X03_RS04700 | 936622..937920 | - | 1299 | WP_082259140.1 | FAD-binding oxidoreductase | - |
| B4X03_RS04720 | 938446..938934 | - | 489 | WP_005710400.1 | transcription elongation factor GreB | - |
| B4X03_RS04725 | 938934..939869 | - | 936 | WP_005710401.1 | Arabinose 5-phosphate isomerase KpsF | VF |
| B4X03_RS04730 | 939930..940511 | - | 582 | WP_021110392.1 | hypothetical protein | VF |
| B4X03_RS04735 | 940611..941771 | - | 1161 | WP_005710403.1 | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | - |
| B4X03_RS04740 | 941972..942280 | - | 309 | WP_005710405.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| B4X03_RS11515 | 942421..942621 | - | 201 | WP_021119412.1 | hypothetical protein | Toxin Detail |
| B4X03_RS04770 | 943456..944895 | + | 1440 | WP_082259141.1 | glutamate--tRNA ligase | - |
| B4X03_RS04780 | 945362..945628 | - | 267 | Protein_911 | cation-transporting ATPase PacS | - |
| B4X03_RS04785 | 945583..946517 | - | 935 | Protein_912 | IS256 family transposase ISEc39 | Transposase |
| B4X03_RS04790 | 946657..947031 | - | 375 | WP_082259142.1 | cytochrome b562 | - |
| B4X03_RS04795 | 947108..948325 | - | 1218 | WP_021114544.1 | beta-ketoacyl-ACP synthase I | - |
| B4X03_RS04800 | 948490..949788 | - | 1299 | WP_082259143.1 | adenylosuccinate synthase | - |
| B4X03_RS04805 | 950072..950959 | - | 888 | WP_021111697.1 | protease modulator HflC | - |
| B4X03_RS04810 | 950962..952176 | - | 1215 | WP_075592867.1 | FtsH protease activity modulator HflK | - |
| B4X03_RS04815 | 952422..953093 | + | 672 | WP_005710432.1 | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase | - |
| B4X03_RS04820 | 953093..954228 | + | 1136 | Protein_919 | dTDP-4-amino-4,6-dideoxygalactose transaminase | - |
| B4X03_RS04825 | 954374..954860 | - | 487 | Protein_920 | rRNA adenine N-6-methyltransferase family protein | - |
| B4X03_RS04830 | 954862..955619 | - | 758 | Protein_921 | ABC transporter ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|