MGE detailed information
MGE type: IScluster/Tn MGE length: 13229 bp
Accession: NZ_CP020085 Location: 23739..36967 Organism: Glaesserella parasuis strain CL120103 Replicon: chromosome
Accession: NZ_CP020085 Location: 23739..36967 Organism: Glaesserella parasuis strain CL120103 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B4X03_RS00120 | 18927..19682 | + | 756 | WP_021114285.1 | cell envelope integrity protein TolA | - |
| B4X03_RS00125 | 19759..20079 | - | 321 | WP_005713919.1 | DUF2322 family protein | - |
| B4X03_RS00130 | 20096..20815 | - | 720 | WP_021111312.1 | SPOR domain-containing protein | - |
| B4X03_RS00135 | 20879..21508 | - | 630 | WP_021114284.1 | thiamine ABC transporter ATP-binding protein | - |
| B4X03_RS00145 | 21827..22555 | - | 729 | WP_021111310.1 | TerC family protein | - |
| B4X03_RS00150 | 22642..23322 | - | 681 | WP_082259013.1 | DNA mismatch repair endonuclease MutH | - |
| B4X03_RS00155 | 23556..23951 | + | 396 | Protein_30 | IS1595 family transposase ISHps3 | Transposase |
| B4X03_RS00160 | 24032..24967 | + | 936 | WP_082259014.1 | hypothetical protein | - |
| B4X03_RS00165 | 25067..26006 | + | 940 | Protein_32 | IS256 family transposase ISEc39 | Transposase |
| B4X03_RS00170 | 25966..26683 | - | 718 | Protein_33 | helix-turn-helix domain-containing protein | - |
| B4X03_RS00175 | 26867..27346 | - | 480 | WP_010786761.1 | hypothetical protein | VF |
| B4X03_RS00180 | 27364..28014 | - | 651 | WP_010786760.1 | cytochrome c biogenesis protein CcdA | - |
| B4X03_RS00185 | 28016..28990 | - | 975 | WP_232744941.1 | Peptide methionine sulfoxide reductase MsrA/MsrB | VF |
| B4X03_RS00190 | 29191..29520 | - | 330 | WP_021113605.1 | hypothetical protein | - |
| B4X03_RS00195 | 29662..30234 | + | 573 | WP_021116087.1 | sigma-70 family RNA polymerase sigma factor | - |
| B4X03_RS00200 | 30231..30416 | + | 186 | WP_005713975.1 | zf-HC2 domain-containing protein | - |
| B4X03_RS00205 | 30605..31349 | - | 745 | Protein_40 | IS481 family transposase | - |
| B4X03_RS00210 | 31441..32379 | - | 939 | WP_062923993.1 | hypothetical protein | - |
| B4X03_RS00215 | 32456..32785 | - | 330 | WP_082259016.1 | hypothetical protein | - |
| B4X03_RS00220 | 32900..33304 | - | 405 | WP_021110905.1 | DNA polymerase III subunit psi | - |
| B4X03_RS00225 | 33463..33798 | + | 336 | WP_021114433.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| B4X03_RS00230 | 33806..34102 | + | 297 | WP_164681833.1 | putative addiction module antidote protein | Antitoxin Detail |
| B4X03_RS00235 | 34175..35164 | + | 990 | WP_021114432.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| B4X03_RS00240 | 35265..36390 | + | 1126 | Protein_47 | IS3 family transposase ISHin1 | Transposase |
| B4X03_RS00245 | 36417..36967 | - | 551 | Protein_48 | IS5 family transposase ISAac2 | Transposase |
| B4X03_RS11385 | 37148..37711 | + | 564 | WP_236933856.1 | hypothetical protein | - |
| B4X03_RS00255 | 38084..39271 | - | 1188 | WP_016527483.1 | elongation factor Tu | - |
| B4X03_RS00280 | 40136..41077 | + | 942 | WP_016527481.1 | type I pantothenate kinase | - |
| B4X03_RS00285 | 41080..41787 | + | 708 | WP_016527480.1 | methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|