MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 133573 bp
Accession: NZ_CP020046 Location: 326390..459962 Organism: Thiomonas intermedia strain ATCC 15466 Replicon: chromosome
Accession: NZ_CP020046 Location: 326390..459962 Organism: Thiomonas intermedia strain ATCC 15466 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BVH73_RS01520 () | 321643..322035 | + | 393 | WP_079415493.1 | hypothetical protein | - |
| BVH73_RS15645 () | 322071..322280 | + | 210 | WP_154048388.1 | hypothetical protein | - |
| BVH73_RS01525 () | 322242..323126 | - | 885 | WP_079415495.1 | aldo/keto reductase family oxidoreductase | - |
| BVH73_RS01530 () | 323238..324140 | + | 903 | WP_079415497.1 | LysR family transcriptional regulator | - |
| BVH73_RS01535 () | 324214..324480 | - | 267 | WP_154048389.1 | hypothetical protein | - |
| BVH73_RS01540 () | 324605..325645 | - | 1041 | WP_154048390.1 | linear amide C-N hydrolase | - |
| BVH73_RS01550 () | 326555..327499 | - | 945 | WP_079415503.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| BVH73_RS01555 () | 327492..328103 | - | 612 | WP_079415505.1 | hypothetical protein | - |
| BVH73_RS01560 () | 328266..329444 | - | 1179 | WP_079420220.1 | MFS transporter | - |
| BVH73_RS01565 () | 329486..330475 | - | 990 | WP_079415507.1 | aldo/keto reductase | - |
| BVH73_RS01570 () | 330579..331478 | + | 900 | WP_169836732.1 | LysR family transcriptional regulator | - |
| BVH73_RS01575 () | 331491..332018 | - | 528 | WP_079415511.1 | GNAT family N-acetyltransferase | - |
| BVH73_RS01580 () | 332015..332506 | - | 492 | WP_079415513.1 | carboxymuconolactone decarboxylase family protein | - |
| BVH73_RS01585 () | 332581..333063 | + | 483 | WP_079415515.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| BVH73_RS01590 () | 333102..334514 | - | 1413 | WP_079415517.1 | FAD-binding protein | - |
| BVH73_RS01595 () | 334616..336004 | - | 1389 | WP_079415519.1 | Multidrug resistance protein Stp | VF |
| BVH73_RS01600 () | 336014..336796 | - | 783 | WP_079420222.1 | class I SAM-dependent methyltransferase | - |
| BVH73_RS01605 () | 336872..337984 | - | 1113 | WP_154048515.1 | branched-chain amino acid ABC transporter substrate-binding protein | - |
| BVH73_RS01610 () | 338279..338719 | + | 441 | WP_079420224.1 | Lrp/AsnC family transcriptional regulator | - |
| BVH73_RS01620 () | 338879..339451 | - | 573 | WP_079415526.1 | NAD(P)H-dependent oxidoreductase | - |
| BVH73_RS01625 () | 339520..339843 | - | 324 | WP_079415528.1 | EthD family reductase | - |
| BVH73_RS01630 () | 340039..341049 | - | 1011 | WP_079415530.1 | hypothetical protein | - |
| BVH73_RS01635 () | 341060..342355 | - | 1296 | WP_079415532.1 | MFS transporter | - |
| BVH73_RS01640 () | 342352..342789 | - | 438 | WP_154048391.1 | carboxymuconolactone decarboxylase family protein | - |
| BVH73_RS01645 () | 344049..344351 | + | 303 | WP_079415534.1 | type II toxin-antitoxin system HigB family toxin | - |
| BVH73_RS01650 () | 344370..344741 | + | 372 | WP_079415537.1 | transcriptional regulator | - |
| BVH73_RS01655 () | 344863..346248 | - | 1386 | WP_079415540.1 | Type IV secretion system protein PtlG | VF |
| BVH73_RS01660 () | 346258..347223 | - | 966 | WP_079415543.1 | hypothetical protein | VF |
| BVH73_RS01665 () | 347408..348058 | - | 651 | WP_079420227.1 | conjugal transfer protein | - |
| BVH73_RS15650 () | 348477..348635 | + | 159 | WP_154048392.1 | hypothetical protein | - |
| BVH73_RS01670 () | 348691..350247 | - | 1557 | WP_079415545.1 | MFS transporter | - |
| BVH73_RS01675 () | 350422..351321 | + | 900 | WP_079420228.1 | HTH-type transcriptional regulator DmlR | VF |
| BVH73_RS15655 () | 351592..351849 | - | 258 | Protein_323 | IS256 family transposase ISCARN61 | Transposase |
| BVH73_RS01685 () | 352111..352941 | - | 831 | WP_079415550.1 | 4'-phosphopantetheinyl transferase superfamily protein | - |
| BVH73_RS01690 () | 353068..354315 | - | 1248 | WP_079415552.1 | multidrug effflux MFS transporter | - |
| BVH73_RS01695 () | 354674..355276 | - | 603 | WP_079415554.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| BVH73_RS01700 () | 355329..359936 | - | 4608 | WP_079415556.1 | Polyketide synthase PksR | VF |
| BVH73_RS01705 () | 359966..372403 | - | 12438 | WP_079415558.1 | Polyketide synthase PksJ | VF |
| BVH73_RS01710 () | 372481..373422 | - | 942 | WP_079415560.1 | diiron oxygenase | - |
| BVH73_RS01715 () | 373432..374061 | - | 630 | WP_079415562.1 | aminodeoxychorismate/anthranilate synthase component II | - |
| BVH73_RS01720 () | 374049..375875 | - | 1827 | WP_169836733.1 | aminodeoxychorismate synthase component I | - |
| BVH73_RS01725 () | 376631..377182 | - | 552 | WP_079415566.1 | Acyl-homoserine-lactone synthase | VF |
| BVH73_RS01730 () | 377266..377652 | - | 387 | WP_079420230.1 | DUF4902 domain-containing protein | - |
| BVH73_RS01735 () | 377811..378308 | + | 498 | Protein_334 | Transcriptional activator protein AnoR | VF |
| BVH73_RS01740 () | 378403..379194 | - | 792 | WP_079415568.1 | IS21 family transposase ISAzo12 | Transposase |
| BVH73_RS01745 () | 379217..380761 | - | 1545 | WP_079420231.1 | IS21 family transposase ISAzo12 | Transposase |
| BVH73_RS01750 () | 381019..381207 | + | 189 | Protein_337 | Transcriptional activator protein AnoR | VF |
| BVH73_RS01755 () | 381613..381846 | - | 234 | WP_079415572.1 | hypothetical protein | - |
| BVH73_RS01760 () | 381848..383437 | - | 1590 | WP_079415574.1 | P-type conjugative transfer protein TrbL | - |
| BVH73_RS01765 () | 383448..384146 | - | 699 | WP_079415576.1 | P-type conjugative transfer protein TrbJ | - |
| BVH73_RS01770 () | 384232..386682 | - | 2451 | WP_079415578.1 | transporter | - |
| BVH73_RS01775 () | 386679..386978 | - | 300 | WP_079415580.1 | VirB3 family type IV secretion system protein | - |
| BVH73_RS01780 () | 387075..387428 | - | 354 | WP_079415582.1 | TrbC/VirB2 family protein | - |
| BVH73_RS01785 () | 387750..388865 | - | 1116 | WP_079415584.1 | MFS transporter | - |
| BVH73_RS01790 () | 388910..389677 | - | 768 | WP_079415586.1 | iron-containing redox enzyme family protein | - |
| BVH73_RS01800 () | 389805..390776 | + | 972 | WP_154048393.1 | Transcriptional activator FeaR | VF |
| BVH73_RS01805 () | 391042..392031 | - | 990 | WP_079415592.1 | RelA/SpoT domain-containing protein | - |
| BVH73_RS01810 () | 392028..393125 | - | 1098 | WP_169836734.1 | nucleoid-associated protein | - |
| BVH73_RS01815 () | 393349..393942 | - | 594 | WP_079415596.1 | S26 family signal peptidase | - |
| BVH73_RS01820 () | 393944..395878 | - | 1935 | WP_079415598.1 | Conjugal transfer protein TraG | VF |
| BVH73_RS01825 () | 395946..398009 | - | 2064 | WP_079415600.1 | DUF1738 domain-containing protein | - |
| BVH73_RS15660 () | 398002..398148 | - | 147 | WP_154048394.1 | hypothetical protein | - |
| BVH73_RS15905 () | 398230..401133 | - | 2904 | WP_169836735.1 | toprim domain-containing protein | - |
| BVH73_RS01840 () | 401275..402228 | - | 954 | WP_154048395.1 | Type IV secretion system protein VirB11 | VF |
| BVH73_RS01845 () | 402456..402632 | + | 177 | WP_079420234.1 | DUF1778 domain-containing protein | - |
| BVH73_RS01850 () | 402655..407979 | + | 5325 | WP_079415602.1 | DEAD/DEAH box helicase | - |
| BVH73_RS01855 () | 407986..410838 | + | 2853 | WP_079415604.1 | DEAD/DEAH box helicase | - |
| BVH73_RS01860 () | 410843..415816 | + | 4974 | WP_154048396.1 | N-6 DNA methylase | - |
| BVH73_RS01865 () | 415826..417814 | + | 1989 | WP_079415606.1 | hypothetical protein | - |
| BVH73_RS01870 () | 417872..421702 | + | 3831 | WP_079415607.1 | RNA-directed DNA polymerase | - |
| BVH73_RS01875 () | 421718..421900 | + | 183 | WP_079415608.1 | hypothetical protein | - |
| BVH73_RS01880 () | 421897..422619 | + | 723 | WP_079415610.1 | HNH endonuclease | - |
| BVH73_RS01885 () | 422748..423329 | - | 582 | WP_079415611.1 | TetR/AcrR family transcriptional regulator | - |
| BVH73_RS01890 () | 423402..424676 | + | 1275 | WP_079415612.1 | beta-ketoacyl-ACP synthase II | - |
| BVH73_RS01895 () | 424731..425630 | - | 900 | WP_079415614.1 | LysR family transcriptional regulator | - |
| BVH73_RS01900 () | 425719..426687 | + | 969 | WP_079415616.1 | sugar nucleotide-binding protein | - |
| BVH73_RS01905 () | 426684..427175 | + | 492 | WP_079415617.1 | hypothetical protein | - |
| BVH73_RS01910 () | 427282..429483 | - | 2202 | WP_079415618.1 | relaxase/mobilization nuclease domain-containing protein | - |
| BVH73_RS01915 () | 429459..429794 | - | 336 | WP_079415620.1 | hypothetical protein | - |
| BVH73_RS01920 () | 430127..430702 | + | 576 | WP_079415622.1 | hypothetical protein | - |
| BVH73_RS01925 () | 430729..431490 | + | 762 | WP_079415624.1 | hypothetical protein | - |
| BVH73_RS01930 () | 431490..431993 | + | 504 | WP_079415625.1 | hypothetical protein | - |
| BVH73_RS01935 () | 431983..432789 | + | 807 | WP_079415627.1 | hypothetical protein | - |
| BVH73_RS01940 () | 433136..434830 | + | 1695 | WP_079420235.1 | IS1634 family transposase ISCARN23 | Transposase |
| BVH73_RS15665 () | 435391..436443 | - | 1053 | WP_154048398.1 | hypothetical protein | - |
| BVH73_RS01950 () | 436814..437497 | + | 684 | WP_079415630.1 | Type IV secretion system protein virB1 | VF |
| BVH73_RS01955 () | 437430..437687 | - | 258 | WP_079420237.1 | hypothetical protein | - |
| BVH73_RS01960 () | 438398..438943 | - | 546 | WP_079415631.1 | hypothetical protein | - |
| BVH73_RS01965 () | 438936..439895 | - | 960 | WP_169836736.1 | ParB/RepB/Spo0J family partition protein | - |
| BVH73_RS15670 () | 440786..441121 | - | 336 | Protein_380 | DUF1376 domain-containing protein | - |
| BVH73_RS01980 () | 441221..441892 | + | 672 | WP_154048399.1 | helix-turn-helix domain-containing protein | - |
| BVH73_RS01985 () | 441889..442617 | + | 729 | WP_079415638.1 | hypothetical protein | - |
| BVH73_RS01990 () | 442614..443453 | + | 840 | WP_079415639.1 | hypothetical protein | - |
| BVH73_RS01995 () | 443622..443882 | + | 261 | WP_079415641.1 | hypothetical protein | - |
| BVH73_RS02000 () | 443879..444487 | + | 609 | WP_079415642.1 | hypothetical protein | - |
| BVH73_RS02005 () | 444520..444828 | + | 309 | WP_079415643.1 | hypothetical protein | - |
| BVH73_RS02010 () | 444895..445179 | + | 285 | WP_079415645.1 | hypothetical protein | - |
| BVH73_RS02020 () | 445453..445677 | - | 225 | Protein_388 | Prophage integrase IntS ; Integrase | Integrase |
| BVH73_RS02025 () | 445868..446125 | + | 258 | WP_079415646.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BVH73_RS02030 () | 446122..446490 | + | 369 | WP_079415647.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| BVH73_RS02035 () | 446595..447761 | - | 1167 | WP_079415648.1 | DUF2399 domain-containing protein | - |
| BVH73_RS02040 () | 447758..451201 | - | 3444 | WP_079415649.1 | hypothetical protein | - |
| BVH73_RS02045 () | 451198..451920 | - | 723 | WP_079415650.1 | DUF4194 domain-containing protein | - |
| BVH73_RS02050 () | 451925..453397 | - | 1473 | WP_079415651.1 | hypothetical protein | - |
| BVH73_RS02055 () | 453379..454224 | - | 846 | WP_169836737.1 | WYL domain-containing protein | - |
| BVH73_RS02060 () | 454928..455890 | + | 963 | WP_079415655.1 | IS5 family transposase ISRso18 | Transposase |
| BVH73_RS02065 () | 456127..456627 | + | 501 | WP_079415657.1 | hypothetical protein | - |
| BVH73_RS02075 () | 456968..457312 | - | 345 | WP_079415660.1 | hypothetical protein | - |
| BVH73_RS02080 () | 457622..458473 | - | 852 | WP_079415661.1 | abortive infection family protein | - |
| BVH73_RS02085 () | 458592..459785 | - | 1194 | WP_079415663.1 | Prophage integrase IntA ; Integrase | Integrase |
| BVH73_RS02095 () | 460088..462067 | - | 1980 | WP_079415664.1 | acetate--CoA ligase | - |
| BVH73_RS02100 () | 462260..462910 | + | 651 | WP_079415665.1 | YqhA family protein | - |
| BVH73_RS02105 () | 462962..464488 | + | 1527 | WP_079415667.1 | fumarate hydratase | - |
| BVH73_RS02110 () | 464500..464721 | + | 222 | WP_079415668.1 | cysteine-rich CWC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|