NZ_CP0199674236030..4258657

MGE detailed information

MGE type: Genomic_island        MGE length: 22628 bp
Accession: NZ_CP019967        Location: 4236030..4258657         Organism: Rhodopseudomonas palustris strain YSC3       Replicon: chromosome


Gene structure

The 5 kb flanking regions of this MGE are displayed.

RPYSC3_RS19555RPYSC3_RS19565RPYSC3_RS19575RPYSC3_RS19590RPYSC3_RS19615RPYSC3_RS19625RPYSC3_RS19630RPYSC3_RS19665RPYSC3_RS19680RPYSC3_RS19685RPYSC3_RS19690RPYSC3_RS19695RPYSC3_RS19700RPYSC3_RS19705RPYSC3_RS19715RPYSC3_RS19560RPYSC3_RS19570RPYSC3_RS19580RPYSC3_RS19595RPYSC3_RS19600RPYSC3_RS19605RPYSC3_RS19610RPYSC3_RS19620RPYSC3_RS19635RPYSC3_RS19640RPYSC3_RS19645RPYSC3_RS19650RPYSC3_RS19655RPYSC3_RS19660RPYSC3_RS19670RPYSC3_RS19710RPYSC3_RS19720
Location: 4231094..4232200 (1107 bp)
Type: Others
Protein ID: WP_107345544.1
Location: 4233310..4234308 (999 bp)
Type: Others
Protein ID: WP_107357584.1
Location: 4235335..4236033 (699 bp)
Type: Others
Protein ID: WP_107356557.1
Location: 4237313..4238620 (1308 bp)
Type: Others
Protein ID: WP_107356559.1
Location: 4241385..4241708 (324 bp)
Type: Others
Protein ID: WP_107345553.1
Location: 4243654..4243893 (240 bp)
Type: Others
Protein ID: WP_107356563.1
Location: 4243890..4244615 (726 bp)
Type: Others
Protein ID: WP_107356564.1
Location: 4248553..4249776 (1224 bp)
Type: Others
Protein ID: WP_107345565.1
Location: 4252286..4252618 (333 bp)
Type: Others
Protein ID: WP_107345566.1
Location: 4252770..4253609 (840 bp)
Type: VF
Protein ID: WP_107357588.1
Location: 4253750..4256059 (2310 bp)
Type: Others
Protein ID: WP_107356571.1
Location: 4256078..4256608 (531 bp)
Type: Others
Protein ID: WP_107356572.1
Location: 4256608..4257615 (1008 bp)
Type: Others
Protein ID: Protein_3875
Location: 4257709..4258657 (949 bp)
Type: Transposase
Protein ID: WP_107353808.1
Location: 4260708..4262486 (1779 bp)
Type: Others
Protein ID: WP_107356573.1
Location: 4232429..4233163 (735 bp)
Type: Others
Protein ID: WP_107356555.1
Location: 4234298..4235065 (768 bp)
Type: Others
Protein ID: WP_107356556.1
Location: 4236030..4236668 (639 bp)
Type: Others
Protein ID: WP_107356558.1
Location: 4238863..4239564 (702 bp)
Type: Others
Protein ID: WP_107356560.1
Location: 4239622..4239861 (240 bp)
Type: Others
Protein ID: WP_107356561.1
Location: 4239885..4240130 (246 bp)
Type: Others
Protein ID: WP_011159358.1
Location: 4240320..4241087 (768 bp)
Type: Others
Protein ID: WP_199851757.1
Location: 4242381..4243199 (819 bp)
Type: Others
Protein ID: WP_107356562.1
Location: 4244669..4245154 (486 bp)
Type: Others
Protein ID: WP_107357586.1
Location: 4245215..4245718 (504 bp)
Type: Others
Protein ID: WP_107357587.1
Location: 4245752..4246153 (402 bp)
Type: Others
Protein ID: WP_107356565.1
Location: 4246269..4246670 (402 bp)
Type: Toxin
Protein ID: WP_107356566.1
Location: 4246667..4246903 (237 bp)
Type: Antitoxin
Protein ID: WP_107356567.1
Location: 4246966..4248162 (1197 bp)
Type: Others
Protein ID: WP_107356568.1
Location: 4249857..4251770 (1914 bp)
Type: Others
Protein ID: WP_107356569.1
Location: 4258790..4260541 (1752 bp)
Type: Others
Protein ID: WP_199851758.1
Location: 4262647..4263402 (756 bp)
Type: Others
Protein ID: WP_107356574.1
ToxinAntibiotic ResistanceTransposaseIntegraseOthersAntitoxinVirulence FactorRelaxaseoriT
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
RPYSC3_RS19555 ()4231094..4232200+1107WP_107345544.1branched-chain amino acid ABC transporter substrate-binding protein-
RPYSC3_RS19560 ()4232429..4233163-735WP_107356555.1cytochrome C biogenesis protein-
RPYSC3_RS19565 ()4233310..4234308+999WP_107357584.1P1 family peptidase-
RPYSC3_RS19570 ()4234298..4235065-768WP_107356556.1EF-hand domain-containing protein-
RPYSC3_RS19575 ()4235335..4236033+699WP_107356557.1ribulose-phosphate 3-epimerase-
RPYSC3_RS19580 ()4236030..4236668-639WP_107356558.1hypothetical protein-
RPYSC3_RS19590 ()4237313..4238620+1308WP_107356559.1adenylosuccinate lyase-
RPYSC3_RS19595 ()4238863..4239564-702WP_107356560.1phosphoribosylformylglycinamidine synthase subunit PurQ-
RPYSC3_RS19600 ()4239622..4239861-240WP_107356561.1hypothetical protein-
RPYSC3_RS19605 ()4239885..4240130-246WP_011159358.1phosphoribosylformylglycinamidine synthase subunit PurS-
RPYSC3_RS19610 ()4240320..4241087-768WP_199851757.1phosphoribosylaminoimidazolesuccinocarboxamide synthase-
RPYSC3_RS19615 ()4241385..4241708+324WP_107345553.1DUF1476 domain-containing protein-
RPYSC3_RS19620 ()4242381..4243199-819WP_107356562.1isocitrate lyase/phosphoenolpyruvate mutase family protein-
RPYSC3_RS19625 ()4243654..4243893+240WP_107356563.1hypothetical protein-
RPYSC3_RS19630 ()4243890..4244615+726WP_107356564.1Fic family protein-
RPYSC3_RS19635 ()4244669..4245154-486WP_107357586.1transcription elongation factor GreA-
RPYSC3_RS19640 ()4245215..4245718-504WP_107357587.1mismatch-specific DNA-glycosylase-
RPYSC3_RS19645 ()4245752..4246153-402WP_107356565.1DUF2147 domain-containing protein-
RPYSC3_RS19650 ()4246269..4246670-402WP_107356566.1type II toxin-antitoxin system VapC family toxinToxin Detail
RPYSC3_RS19655 ()4246667..4246903-237WP_107356567.1AbrB/MazE/SpoVT family DNA-binding domain-containing proteinAntitoxin Detail
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Similar MGE(s)

Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

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Detail
Organism
MGE type
Related TA
Genome accession
Coordinates
Mash
distance
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