MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 175021 bp
Accession: NZ_CP019949 Location: 1..175021 Organism: Methylocystis bryophila strain S285 Replicon: plasmid p1
Accession: NZ_CP019949 Location: 1..175021 Organism: Methylocystis bryophila strain S285 Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B1812_RS23155 () | 1969..3387 | - | 1419 | Protein_2 | Tyrocidine synthase 3 | VF |
| B1812_RS23160 () | 3388..3717 | - | 330 | Protein_3 | Tyrocidine synthase 3 | VF |
| B1812_RS23165 () | 5161..6705 | - | 1545 | Protein_4 | Tyrocidine synthase 3 | VF |
| B1812_RS23170 () | 6883..8484 | - | 1602 | Protein_5 | Tyrocidine synthase 3 | VF |
| B1812_RS21445 () | 9684..11744 | - | 2061 | WP_158658920.1 | Linear gramicidin synthase subunit D | VF |
| B1812_RS21455 () | 12164..16366 | - | 4203 | WP_158658921.1 | Linear gramicidin synthase subunit D | VF |
| B1812_RS21460 () | 16369..22797 | - | 6429 | WP_158658922.1 | Linear gramicidin synthase subunit D | VF |
| B1812_RS21465 () | 22794..23855 | - | 1062 | WP_085773901.1 | TauD/TfdA family dioxygenase | - |
| B1812_RS21470 () | 23882..33913 | - | 10032 | WP_158658923.1 | Tyrocidine synthase 3 | VF |
| B1812_RS21475 () | 34182..34406 | - | 225 | WP_085773903.1 | Protein MbtH | VF |
| B1812_RS21480 () | 34450..35865 | - | 1416 | WP_199769105.1 | Diaminobutyrate--2-oxoglutarate aminotransferase | VF |
| B1812_RS21485 () | 36798..38044 | + | 1247 | Protein_13 | IS110 family transposase | - |
| B1812_RS22925 () | 38939..39431 | - | 493 | Protein_14 | efflux RND transporter permease subunit | - |
| B1812_RS23175 () | 39398..39547 | - | 150 | WP_199769106.1 | hypothetical protein | - |
| B1812_RS21500 () | 39760..40836 | + | 1077 | WP_102938235.1 | metallophosphoesterase | - |
| B1812_RS21505 () | 40939..42351 | - | 1413 | WP_085773908.1 | HAMP domain-containing histidine kinase | - |
| B1812_RS21510 () | 42348..43034 | - | 687 | WP_085773909.1 | Transcriptional regulatory protein BasR | VF |
| B1812_RS21515 () | 43352..48235 | + | 4884 | WP_102938231.1 | TonB-dependent siderophore receptor | - |
| B1812_RS21520 () | 48329..49699 | + | 1371 | WP_085773911.1 | PepSY domain-containing protein | - |
| B1812_RS22930 () | 49817..50275 | + | 459 | WP_158658925.1 | hypothetical protein | - |
| B1812_RS21525 () | 50370..51662 | + | 1293 | WP_158658926.1 | efflux RND transporter periplasmic adaptor subunit | - |
| B1812_RS21530 () | 51659..52414 | + | 756 | WP_085773913.1 | putative ABC transporter ATP-binding protein YknY | VF |
| B1812_RS21535 () | 52411..53619 | + | 1209 | WP_085773914.1 | ABC transporter permease | - |
| B1812_RS21540 () | 53725..55128 | + | 1404 | WP_102938236.1 | efflux transporter outer membrane subunit | - |
| B1812_RS21550 () | 55624..56409 | + | 786 | WP_085773917.1 | hypothetical protein | - |
| B1812_RS21555 () | 56452..57375 | + | 924 | WP_085773918.1 | ISL3 family transposase ISRsp8 | Transposase |
| B1812_RS23180 () | 57387..57635 | + | 249 | WP_085773919.1 | ISL3 family transposase ISRsp8 | Transposase |
| B1812_RS21565 () | 57854..59305 | - | 1452 | WP_085773920.1 | ABC transporter permease subunit | - |
| B1812_RS21570 () | 59322..60701 | - | 1380 | WP_085774005.1 | DUF3526 domain-containing protein | - |
| B1812_RS21575 () | 60727..61431 | - | 705 | WP_085773921.1 | putative ABC transporter ATP-binding protein NosF | VF |
| B1812_RS21580 () | 62142..63233 | + | 1092 | WP_158658927.1 | ISL3 family transposase ISRsp8 | Transposase |
| B1812_RS21585 () | 63298..64527 | - | 1230 | WP_085774006.1 | group II intron reverse transcriptase/maturase | - |
| B1812_RS22940 () | 65277..65447 | - | 171 | Protein_34 | Tn3 family transposase | - |
| B1812_RS21590 () | 65562..66095 | - | 534 | WP_085773923.1 | IS91 family transposase ISMno23 | Transposase |
| B1812_RS21595 () | 66390..66752 | - | 363 | WP_085773924.1 | hypothetical protein | - |
| B1812_RS21600 () | 67146..67919 | + | 774 | WP_085773925.1 | band 7 domain-containing protein | - |
| B1812_RS21605 () | 68630..72340 | + | 3711 | WP_085773926.1 | Autoinducer 2 sensor kinase/phosphatase LuxQ | VF |
| B1812_RS21615 () | 72631..73734 | - | 1104 | WP_158658928.1 | ISKra4 family transposase ISKpn19 | Transposase |
| B1812_RS21620 () | 73656..73994 | - | 339 | WP_210190845.1 | ISKra4 family transposase ISCot1 | Transposase |
| B1812_RS21625 () | 74114..74533 | - | 420 | WP_085773930.1 | type II toxin-antitoxin system MqsA family antitoxin | - |
| B1812_RS21630 () | 74536..74841 | - | 306 | WP_085773931.1 | type II toxin-antitoxin system MqsR family toxin | - |
| B1812_RS21635 () | 75134..75838 | - | 705 | WP_085773932.1 | SMC-Scp complex subunit ScpB | - |
| B1812_RS21640 () | 75845..76795 | - | 951 | WP_158658929.1 | DUF1403 family protein | - |
| B1812_RS21645 () | 77030..78163 | + | 1134 | WP_085773934.1 | tyrosine-type recombinase/integrase | - |
| B1812_RS21650 () | 78202..78627 | - | 426 | WP_085773935.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| B1812_RS21655 () | 78627..78863 | - | 237 | WP_085773936.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| B1812_RS21660 () | 79135..80469 | - | 1335 | WP_085773937.1 | replication initiation protein RepC | - |
| B1812_RS21665 () | 80688..81665 | - | 978 | WP_102938232.1 | plasmid partitioning protein RepB | - |
| B1812_RS21670 () | 81644..82867 | - | 1224 | WP_085773938.1 | Sporulation initiation inhibitor protein Soj | VF |
| B1812_RS21675 () | 83057..84007 | - | 951 | WP_102938237.1 | DUF2493 domain-containing protein | - |
| B1812_RS21680 () | 84713..85768 | + | 1056 | WP_085773939.1 | Fic family protein | - |
| B1812_RS21685 () | 86030..87466 | + | 1437 | WP_085773940.1 | hypothetical protein | - |
| B1812_RS21695 () | 88073..88780 | + | 708 | WP_199769103.1 | hypothetical protein | - |
| B1812_RS21700 () | 89090..89575 | + | 486 | WP_085773942.1 | MucR family transcriptional regulator | - |
| B1812_RS21705 () | 89627..90004 | + | 378 | WP_085773943.1 | HU family DNA-binding protein | - |
| B1812_RS21710 () | 90582..90794 | + | 213 | WP_085773944.1 | cold-shock protein | - |
| B1812_RS21715 () | 90883..91902 | - | 1020 | WP_085773945.1 | toprim domain-containing protein | - |
| B1812_RS21720 () | 91919..96397 | - | 4479 | WP_085773946.1 | strawberry notch family protein | - |
| B1812_RS21725 () | 96497..96910 | - | 414 | WP_085773947.1 | hypothetical protein | - |
| B1812_RS21730 () | 96992..99070 | - | 2079 | WP_085774009.1 | ParB/RepB/Spo0J family partition protein | - |
| B1812_RS21735 () | 99153..99524 | - | 372 | WP_085773948.1 | hypothetical protein | - |
| B1812_RS21745 () | 99769..101685 | - | 1917 | WP_085773949.1 | ATP-dependent helicase | - |
| B1812_RS21750 () | 101682..103595 | - | 1914 | WP_085773950.1 | AAA family ATPase | - |
| B1812_RS21755 () | 104294..104683 | + | 390 | WP_085773951.1 | hypothetical protein | - |
| B1812_RS21760 () | 104911..105810 | - | 900 | WP_085773952.1 | toprim domain-containing protein | - |
| B1812_RS21765 () | 105823..106428 | - | 606 | WP_102938233.1 | succinoglycan biosynthesis protein exoi | - |
| B1812_RS21770 () | 106442..107185 | - | 744 | WP_158658930.1 | hypothetical protein | - |
| B1812_RS21775 () | 107207..107731 | - | 525 | WP_158658931.1 | hypothetical protein | - |
| B1812_RS21780 () | 107958..108572 | - | 615 | WP_085773955.1 | hypothetical protein | - |
| B1812_RS21785 () | 108572..108910 | - | 339 | WP_158658932.1 | hypothetical protein | - |
| B1812_RS21790 () | 109226..109783 | + | 558 | WP_085774011.1 | lytic transglycosylase domain-containing protein | - |
| B1812_RS21795 () | 109780..110085 | + | 306 | WP_085773957.1 | hypothetical protein | VF |
| B1812_RS21800 () | 110091..110387 | + | 297 | WP_085773958.1 | hypothetical protein | VF |
| B1812_RS21805 () | 110398..112833 | + | 2436 | WP_085773959.1 | Type IV secretion system protein virB4 | VF |
| B1812_RS21810 () | 112823..113473 | + | 651 | WP_085773960.1 | hypothetical protein | - |
| B1812_RS21815 () | 113539..114261 | + | 723 | WP_085773961.1 | type VI secretion protein | - |
| B1812_RS22945 () | 114274..114453 | + | 180 | WP_158658933.1 | hypothetical protein | - |
| B1812_RS21820 () | 114473..115537 | + | 1065 | WP_158658934.1 | type IV secretion system protein | - |
| B1812_RS21825 () | 115549..116298 | + | 750 | WP_085773963.1 | Type IV secretion system protein virB8 | VF |
| B1812_RS21830 () | 116295..117164 | + | 870 | WP_085773964.1 | Type IV secretion system protein virB9 | VF |
| B1812_RS21835 () | 117177..118523 | + | 1347 | WP_085773965.1 | Type IV secretion system protein virB10 | VF |
| B1812_RS21840 () | 118471..119475 | + | 1005 | WP_085773966.1 | Type IV secretion system protein VirB11 | VF |
| B1812_RS21845 () | 119478..121874 | + | 2397 | WP_085773967.1 | type IV secretory system conjugative DNA transfer family protein | - |
| B1812_RS21850 () | 122084..123616 | - | 1533 | WP_085773968.1 | SAVED domain-containing protein | - |
| B1812_RS21855 () | 123627..124574 | - | 948 | WP_085773969.1 | AAA family ATPase | - |
| B1812_RS21860 () | 124574..125089 | - | 516 | WP_085773970.1 | hypothetical protein | - |
| B1812_RS21865 () | 125099..126064 | - | 966 | WP_085773971.1 | nucleotidyltransferase | - |
| B1812_RS21870 () | 126224..126436 | + | 213 | WP_085773972.1 | transcriptional regulator | - |
| B1812_RS21875 () | 126433..127053 | + | 621 | WP_085773973.1 | GNAT family N-acetyltransferase | - |
| B1812_RS21880 () | 127089..127559 | + | 471 | WP_085773974.1 | helix-turn-helix domain-containing protein | - |
| B1812_RS21885 () | 127556..128489 | + | 934 | Protein_92 | DUF955 domain-containing protein | - |
| B1812_RS21890 () | 128798..131776 | - | 2979 | WP_085773975.1 | hypothetical protein | Relaxase |
| B1812_RS21895 () | 131773..132177 | - | 405 | WP_085773976.1 | hypothetical protein | Relaxase |
| B1812_RS21905 () | 133200..133886 | + | 687 | WP_085773978.1 | P-loop NTPase | - |
| B1812_RS21910 () | 133879..134301 | + | 423 | WP_085773979.1 | hypothetical protein | - |
| B1812_RS22950 () | 134499..134708 | + | 210 | WP_158658944.1 | HU family DNA-binding protein | - |
| B1812_RS21915 () | 134701..135600 | - | 900 | WP_085773980.1 | hypothetical protein | - |
| B1812_RS21920 () | 135597..135932 | - | 336 | WP_085773981.1 | hypothetical protein | - |
| B1812_RS21925 () | 135929..137317 | - | 1389 | WP_085773982.1 | ThiF family adenylyltransferase | - |
| B1812_RS21930 () | 137314..137703 | - | 390 | WP_085773983.1 | hypothetical protein | - |
| B1812_RS21935 () | 137716..138000 | - | 285 | WP_158658935.1 | multiubiquitin domain-containing protein | - |
| B1812_RS21940 () | 138101..138289 | + | 189 | WP_158658936.1 | ribbon-helix-helix protein, CopG family | - |
| B1812_RS21945 () | 138348..138554 | + | 207 | WP_085773985.1 | hypothetical protein | - |
| B1812_RS21950 () | 138554..139138 | + | 585 | WP_085773986.1 | Fic family protein | - |
| B1812_RS22955 () | 139418..139753 | - | 336 | WP_158658937.1 | hypothetical protein | - |
| B1812_RS21960 () | 140512..141183 | - | 672 | WP_102938238.1 | SOS response-associated peptidase | - |
| B1812_RS21965 () | 141519..141896 | - | 378 | WP_085773988.1 | single-stranded DNA-binding protein | - |
| B1812_RS21970 () | 142600..142944 | - | 345 | WP_085773989.1 | single-stranded DNA-binding protein | - |
| B1812_RS21990 () | 144569..145108 | + | 540 | WP_085773993.1 | hypothetical protein | - |
| B1812_RS21995 () | 145545..146036 | + | 492 | WP_158658938.1 | helix-turn-helix domain-containing protein | - |
| B1812_RS22005 () | 148162..149532 | + | 1371 | WP_085773995.1 | Oleandomycin glycosyltransferase | VF |
| B1812_RS22010 () | 149591..150106 | - | 516 | WP_158658939.1 | hypothetical protein | - |
| B1812_RS22015 () | 150196..152577 | - | 2382 | WP_085773997.1 | Penicillin acylase 2 proenzyme | VF |
| B1812_RS22020 () | 152570..154249 | - | 1680 | WP_158658941.1 | ABC transporter ATP-binding/permease protein YojI | VF |
| B1812_RS22025 () | 154588..156102 | - | 1515 | WP_085773999.1 | hypothetical protein | - |
| B1812_RS22030 () | 157125..158306 | - | 1182 | WP_085774000.1 | c-type cytochrome | - |
| B1812_RS22035 () | 158531..159585 | + | 1055 | Protein_119 | IS110 family transposase | - |
| B1812_RS22040 () | 159939..160742 | - | 804 | WP_085774001.1 | Linear gramicidin dehydrogenase LgrE | VF |
| B1812_RS22050 () | 161190..162089 | + | 900 | WP_085774013.1 | cupin-like domain-containing protein | - |
| B1812_RS22055 () | 162776..162777 | - | 2 | WP_102938125.1 | IS630 family transposase ISRel6 | Transposase |
| B1812_RS22060 () | 163212..163489 | - | 278 | Protein_123 | integrase core domain-containing protein | - |
| B1812_RS22065 () | 163587..171650 | - | 8064 | WP_158658942.1 | Tyrocidine synthase 3 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|