MGE detailed information
MGE type: Prophage MGE length: 29531 bp
Accession: NZ_CP019944 Location: 837753..867283 Organism: Escherichia coli strain DSM 103246 Replicon: chromosome
Accession: NZ_CP019944 Location: 837753..867283 Organism: Escherichia coli strain DSM 103246 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Eco28_RS04235 () | 832976..835171 | + | 2196 | WP_021577942.1 | AAA family ATPase | - |
| Eco28_RS04240 () | 836690..837571 | + | 882 | WP_021577941.1 | integrase domain-containing protein | - |
| Eco28_RS04245 () | 837753..839020 | - | 1268 | Protein_776 | Prophage integrase IntA ; Integrase | Integrase |
| Eco28_RS04250 () | 839314..840156 | - | 843 | WP_080029955.1 | DUF4942 domain-containing protein | - |
| Eco28_RS27955 () | 840241..840438 | - | 198 | WP_087904847.1 | DUF957 domain-containing protein | - |
| Eco28_RS27960 () | 840514..840663 | - | 150 | Protein_779 | hypothetical protein | - |
| Eco28_RS04260 () | 840660..841037 | - | 378 | WP_000854821.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| Eco28_RS04265 () | 841127..841495 | - | 369 | WP_080029956.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| Eco28_RS04270 () | 841575..841796 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| Eco28_RS04275 () | 841883..842359 | - | 477 | WP_001186780.1 | RadC family protein | - |
| Eco28_RS04280 () | 842375..842860 | - | 486 | WP_000213716.1 | antirestriction protein | - |
| Eco28_RS04285 () | 842952..843770 | - | 819 | WP_053271315.1 | DUF945 domain-containing protein | - |
| Eco28_RS04290 () | 843860..844069 | - | 210 | WP_032150870.1 | DUF905 family protein | - |
| Eco28_RS04295 () | 844099..844776 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| Eco28_RS04300 () | 844924..845604 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| Eco28_RS04305 () | 845807..846691 | - | 885 | WP_000010408.1 | 50S ribosome-binding GTPase | - |
| Eco28_RS04310 () | 846876..848006 | + | 1131 | WP_000147749.1 | hypothetical protein | - |
| Eco28_RS04315 () | 849502..850233 | + | 732 | WP_001075464.1 | inovirus Gp2 family protein | - |
| Eco28_RS04320 () | 850561..851439 | + | 879 | WP_000769116.1 | restriction endonuclease | - |
| Eco28_RS04325 () | 851493..852067 | + | 575 | Protein_793 | transposase | - |
| Eco28_RS04330 () | 852200..852975 | - | 776 | Protein_794 | DDE-type integrase/transposase/recombinase | - |
| Eco28_RS04335 () | 853196..853633 | + | 438 | WP_080029957.1 | H-NS histone family protein | - |
| Eco28_RS04345 () | 853897..855105 | + | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| Eco28_RS04350 () | 856460..857026 | + | 567 | WP_001126811.1 | inovirus-type Gp2 protein | - |
| Eco28_RS27965 () | 857273..857845 | + | 573 | WP_155120831.1 | hypothetical protein | - |
| Eco28_RS04360 () | 857914..858147 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| Eco28_RS04370 () | 858415..858915 | + | 501 | WP_032216520.1 | hypothetical protein | - |
| Eco28_RS04375 () | 859004..859627 | + | 624 | WP_032216521.1 | hypothetical protein | - |
| Eco28_RS04380 () | 859806..860114 | - | 309 | Protein_802 | IS3 family transposase ISCfr6 | Transposase |
| Eco28_RS04385 () | 860131..861207 | - | 1077 | WP_038989268.1 | IS110 family transposase ISEc21 | Transposase |
| Eco28_RS04395 () | 861489..861668 | - | 180 | Protein_804 | IS3 family transposase ISEc31 | Transposase |
| Eco28_RS04400 () | 861749..863257 | - | 1509 | WP_032352137.1 | group II intron reverse transcriptase/maturase | - |
| Eco28_RS04415 () | 863930..864271 | - | 342 | Protein_806 | IS3 family transposase ISEc31 | Transposase |
| Eco28_RS04420 () | 864638..865375 | + | 738 | WP_001389182.1 | porin family protein | - |
| Eco28_RS04425 () | 865795..866154 | + | 360 | Protein_808 | WYL domain-containing protein | - |
| Eco28_RS04435 () | 866303..867283 | - | 981 | WP_000019446.1 | IS5 family transposase ISKpn26 | Transposase |
| Eco28_RS04440 () | 867371..867613 | - | 243 | Protein_810 | N-acetylneuraminic acid mutarotase | - |
| Eco28_RS04445 () | 867803..868500 | - | 698 | Protein_811 | IS1 family transposase | - |
| Eco28_RS04460 () | 868712..869095 | + | 384 | WP_001470106.1 | helix-turn-helix domain-containing protein | - |
| Eco28_RS04465 () | 869212..870906 | - | 1695 | WP_001547044.1 | NAD-dependent malic enzyme | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|